RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 WDR63Q8IWG1 891 aa20.1■□□□□ 0.81
TRA2B-205ENST00000453386 TMEM132EQ6IEE7 984 aa20.1■□□□□ 0.81
TRA2B-205ENST00000453386 CFAP53Q96M91 514 aa20.1■□□□□ 0.81
TRA2B-205ENST00000453386 DEPDC5O75140 1603 aa20.09■□□□□ 0.81
TRA2B-205ENST00000453386 POGKQ9P215 609 aa20.09■□□□□ 0.81
TRA2B-205ENST00000453386 ATP7AQ04656 1500 aa20.09■□□□□ 0.81
TRA2B-205ENST00000453386 RWDD1Q9H446 243 aaPredicted RBP20.09■□□□□ 0.81
TRA2B-205ENST00000453386 AAMPQ13685 434 aa20.08■□□□□ 0.8
TRA2B-205ENST00000453386 NOS1P29475 1434 aa20.08■□□□□ 0.8
TRA2B-205ENST00000453386 FANCAO15360 1455 aa20.08■□□□□ 0.8
TRA2B-205ENST00000453386 UHRF1BP1LA0JNW5 1464 aa20.07■□□□□ 0.8
TRA2B-205ENST00000453386 PRKCSHP14314 528 aaPredicted RBP20.07■□□□□ 0.8
TRA2B-205ENST00000453386 SBNO2Q9Y2G9 1366 aa20.07■□□□□ 0.8
TRA2B-205ENST00000453386 U2AF1L5P0DN76 240 aaPredicted RBP20.07■□□□□ 0.8
TRA2B-205ENST00000453386 U2AF1Q01081 240 aaKnown RBP eCLIP20.07■□□□□ 0.8
TRA2B-205ENST00000453386 VWDEQ8N2E2 1590 aa20.05■□□□□ 0.8
TRA2B-205ENST00000453386 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
TRA2B-205ENST00000453386 MYH16Q9H6N6 1097 aa20.05■□□□□ 0.8
TRA2B-205ENST00000453386 FTSJ3Q8IY81 847 aaKnown RBP20.04■□□□□ 0.8
TRA2B-205ENST00000453386 TBC1D32Q96NH3 1257 aa20.04■□□□□ 0.8
TRA2B-205ENST00000453386 SPRYD3Q8NCJ5 442 aa20.03■□□□□ 0.8
TRA2B-205ENST00000453386 TBC1D2Q9BYX2 928 aa20.03■□□□□ 0.8
TRA2B-205ENST00000453386 ADGRL1O94910 1474 aa20.03■□□□□ 0.8
TRA2B-205ENST00000453386 C14orf93Q9H972 538 aaKnown RBP20.02■□□□□ 0.8
TRA2B-205ENST00000453386 ARAP3Q8WWN8 1544 aa20.02■□□□□ 0.8
TRA2B-205ENST00000453386 NEURL4Q96JN8 1562 aa20.01■□□□□ 0.79
TRA2B-205ENST00000453386 MVPQ14764 893 aaKnown RBP20.01■□□□□ 0.79
TRA2B-205ENST00000453386 CCDC27Q2M243 656 aa20.01■□□□□ 0.79
TRA2B-205ENST00000453386 NLRP1Q9C000 1473 aa20.01■□□□□ 0.79
TRA2B-205ENST00000453386 ZKSCAN2Q63HK3 967 aa20.01■□□□□ 0.79
TRA2B-205ENST00000453386 KIF1BO60333 1816 aa20.01■□□□□ 0.79
TRA2B-205ENST00000453386 NUTM2DQ5VT03 806 aaPredicted RBP20■□□□□ 0.79
TRA2B-205ENST00000453386 TSR2Q969E8 191 aaKnown RBP20■□□□□ 0.79
TRA2B-205ENST00000453386 ANTXR1Q9H6X2 564 aa20■□□□□ 0.79
TRA2B-205ENST00000453386 VIRMAQ69YN4 1812 aaKnown RBP20■□□□□ 0.79
TRA2B-205ENST00000453386 DZIP1LQ8IYY4 767 aaKnown RBP20■□□□□ 0.79
TRA2B-205ENST00000453386 INO80Q9ULG1 1556 aaPredicted RBP19.99■□□□□ 0.79
TRA2B-205ENST00000453386 GGT6Q6P531 493 aa19.99■□□□□ 0.79
TRA2B-205ENST00000453386 IQSEC2Q5JU85 1478 aa19.99■□□□□ 0.79
TRA2B-205ENST00000453386 NRXN1Q9ULB1 1477 aa19.98■□□□□ 0.79
TRA2B-205ENST00000453386 SHPRHQ149N8 1683 aa19.98■□□□□ 0.79
TRA2B-205ENST00000453386 ZNF518AQ6AHZ1 1483 aa19.98■□□□□ 0.79
TRA2B-205ENST00000453386 EFCAB6Q5THR3 1501 aa19.98■□□□□ 0.79
TRA2B-205ENST00000453386 SMC4Q9NTJ3 1288 aa19.98■□□□□ 0.79
TRA2B-205ENST00000453386 U2SURPO15042 1029 aaKnown RBP19.97■□□□□ 0.79
TRA2B-205ENST00000453386 ARXQ96QS3 562 aa19.97■□□□□ 0.79
TRA2B-205ENST00000453386 MROH1Q8NDA8 1641 aa19.97■□□□□ 0.79
TRA2B-205ENST00000453386 SAFB2Q14151 953 aaKnown RBP eCLIP19.97■□□□□ 0.79
TRA2B-205ENST00000453386 EIF5BO60841 1220 aaKnown RBP19.96■□□□□ 0.79
TRA2B-205ENST00000453386 MFAP1P55081 439 aaKnown RBP19.96■□□□□ 0.79
TRA2B-205ENST00000453386 MROH2AA6NES4 1674 aa19.96■□□□□ 0.79
TRA2B-205ENST00000453386 SENP3Q9H4L4 574 aaPredicted RBP19.95■□□□□ 0.78
TRA2B-205ENST00000453386 EVC2Q86UK5 1308 aa19.95■□□□□ 0.78
TRA2B-205ENST00000453386 MYO3AQ8NEV4 1616 aa19.95■□□□□ 0.78
TRA2B-205ENST00000453386 CABP2Q9NPB3 220 aa19.95■□□□□ 0.78
TRA2B-205ENST00000453386 EXOSC9Q06265 439 aaKnown RBP19.95■□□□□ 0.78
TRA2B-205ENST00000453386 ITPRIPQ8IWB1 547 aa19.95■□□□□ 0.78
TRA2B-205ENST00000453386 FAM43AQ8N2R8 423 aa19.95■□□□□ 0.78
TRA2B-205ENST00000453386 ZMYM3Q14202 1370 aa19.94■□□□□ 0.78
TRA2B-205ENST00000453386 C22orf23Q9BZE7 217 aa19.93■□□□□ 0.78
TRA2B-205ENST00000453386 PPRC1Q5VV67 1664 aaKnown RBP19.93■□□□□ 0.78
TRA2B-205ENST00000453386 L1TD1Q5T7N2 865 aaKnown RBP19.92■□□□□ 0.78
TRA2B-205ENST00000453386 TRIM27P14373 513 aa19.92■□□□□ 0.78
TRA2B-205ENST00000453386 SETBP1Q9Y6X0 1596 aa19.92■□□□□ 0.78
TRA2B-205ENST00000453386 IFT172Q9UG01 1749 aa19.91■□□□□ 0.78
TRA2B-205ENST00000453386 SSH1Q8WYL5 1049 aa19.91■□□□□ 0.78
TRA2B-205ENST00000453386 ABCA9Q8IUA7 1624 aa19.91■□□□□ 0.78
TRA2B-205ENST00000453386 ADGRB3O60242 1522 aa19.9■□□□□ 0.78
TRA2B-205ENST00000453386 CFAP65Q6ZU64 1925 aaKnown RBP19.9■□□□□ 0.78
TRA2B-205ENST00000453386 GZF1Q9H116 711 aaPredicted RBP19.9■□□□□ 0.78
TRA2B-205ENST00000453386 GGNBP2Q9H3C7 697 aa19.9■□□□□ 0.78
TRA2B-205ENST00000453386 ANKRD36BQ8N2N9 1353 aa19.9■□□□□ 0.78
TRA2B-205ENST00000453386 CT47B1P0C2W7 299 aaPredicted RBP19.89■□□□□ 0.78
TRA2B-205ENST00000453386 QRICH2Q9H0J4 1663 aa19.89■□□□□ 0.78
TRA2B-205ENST00000453386 TMPOP42166 694 aaKnown RBP19.89■□□□□ 0.77
TRA2B-205ENST00000453386 NPATQ14207 1427 aa19.89■□□□□ 0.77
TRA2B-205ENST00000453386 DDX19BQ9UMR2 479 aa19.89■□□□□ 0.77
TRA2B-205ENST00000453386 NOB1Q9ULX3 412 aaKnown RBP19.89■□□□□ 0.77
TRA2B-205ENST00000453386 RPGRIP1LQ68CZ1 1315 aa19.88■□□□□ 0.77
TRA2B-205ENST00000453386 NCBP3Q53F19 620 aaKnown RBP19.88■□□□□ 0.77
TRA2B-205ENST00000453386 ATF7IPQ6VMQ6 1270 aa19.88■□□□□ 0.77
TRA2B-205ENST00000453386 MCM4P33991 863 aa19.88■□□□□ 0.77
TRA2B-205ENST00000453386 STK26Q9P289 416 aa19.88■□□□□ 0.77
TRA2B-205ENST00000453386 ADGRB1O14514 1584 aa19.88■□□□□ 0.77
TRA2B-205ENST00000453386 SRPK2P78362 688 aaKnown RBP19.87■□□□□ 0.77
TRA2B-205ENST00000453386 HDAC1Q13547 482 aaPredicted RBP19.87■□□□□ 0.77
TRA2B-205ENST00000453386 NSD2O96028 1365 aa19.87■□□□□ 0.77
TRA2B-205ENST00000453386 TRIM35Q9UPQ4 493 aa19.86■□□□□ 0.77
TRA2B-205ENST00000453386 VGFO15240 615 aaPredicted RBP19.86■□□□□ 0.77
TRA2B-205ENST00000453386 CHMP5Q9NZZ3 219 aa19.86■□□□□ 0.77
TRA2B-205ENST00000453386 GOLGA6L3A6NEY3 463 aa19.85■□□□□ 0.77
TRA2B-205ENST00000453386 TMEM57Q8N5G2 664 aa19.85■□□□□ 0.77
TRA2B-205ENST00000453386 PLEKHF1Q96S99 279 aa19.85■□□□□ 0.77
TRA2B-205ENST00000453386 PUS7Q96PZ0 661 aaKnown RBP19.85■□□□□ 0.77
TRA2B-205ENST00000453386 LMTK2Q8IWU2 1503 aa19.85■□□□□ 0.77
TRA2B-205ENST00000453386 RIPK4P57078 832 aa19.84■□□□□ 0.77
TRA2B-205ENST00000453386 HSCBQ8IWL3 235 aa19.83■□□□□ 0.77
TRA2B-205ENST00000453386 ASXL2Q76L83 1435 aa19.83■□□□□ 0.76
TRA2B-205ENST00000453386 KIDINS220Q9ULH0 1771 aa19.83■□□□□ 0.76
TRA2B-205ENST00000453386 CD109Q6YHK3 1445 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms