RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 BCANQ96GW7 911 aa8.3□□□□□ -1.08
SDC4P-201ENST00000453285 PUS7Q96PZ0 661 aaKnown RBP8.3□□□□□ -1.08
SDC4P-201ENST00000453285 SLC26A8Q96RN1 970 aa8.3□□□□□ -1.08
SDC4P-201ENST00000453285 PLEKHH1Q9ULM0 1364 aa8.3□□□□□ -1.08
SDC4P-201ENST00000453285 STRCQ7RTU9 1775 aa8.3□□□□□ -1.08
SDC4P-201ENST00000453285 ANP32CO43423 234 aa8.29□□□□□ -1.08
SDC4P-201ENST00000453285 RGPD8O14715 1765 aaPredicted RBP8.29□□□□□ -1.08
SDC4P-201ENST00000453285 PIK3R4Q99570 1358 aa8.28□□□□□ -1.08
SDC4P-201ENST00000453285 ROBO2Q9HCK4 1378 aa8.28□□□□□ -1.08
SDC4P-201ENST00000453285 SAFB2Q14151 953 aaKnown RBP eCLIP8.28□□□□□ -1.08
SDC4P-201ENST00000453285 PANK3Q9H999 370 aa8.28□□□□□ -1.08
SDC4P-201ENST00000453285 POGKQ9P215 609 aa8.28□□□□□ -1.08
SDC4P-201ENST00000453285 NPHP4O75161 1426 aaPredicted RBP8.28□□□□□ -1.08
SDC4P-201ENST00000453285 EVC2Q86UK5 1308 aa8.28□□□□□ -1.08
SDC4P-201ENST00000453285 MINK1Q8N4C8 1332 aaPredicted RBP8.28□□□□□ -1.08
SDC4P-201ENST00000453285 ADGRB2O60241 1585 aa8.27□□□□□ -1.09
SDC4P-201ENST00000453285 PRKRIP1Q9H875 184 aaPredicted RBP8.27□□□□□ -1.09
SDC4P-201ENST00000453285 AMOTL2Q9Y2J4 779 aa8.27□□□□□ -1.09
SDC4P-201ENST00000453285 STRCP1A6NGW2 1772 aa8.27□□□□□ -1.09
SDC4P-201ENST00000453285 NCKAP5LQ9HCH0 1330 aa8.27□□□□□ -1.09
SDC4P-201ENST00000453285 AKAP12Q02952 1782 aa8.26□□□□□ -1.09
SDC4P-201ENST00000453285 CCER2I3L3R5 266 aa8.26□□□□□ -1.09
SDC4P-201ENST00000453285 CABP2Q9NPB3 220 aa8.26□□□□□ -1.09
SDC4P-201ENST00000453285 PTCH1Q13635 1447 aa8.26□□□□□ -1.09
SDC4P-201ENST00000453285 CDK19Q9BWU1 502 aa8.25□□□□□ -1.09
SDC4P-201ENST00000453285 SLC12A5Q9H2X9 1139 aa8.25□□□□□ -1.09
SDC4P-201ENST00000453285 NWD1Q149M9 1564 aa8.25□□□□□ -1.09
SDC4P-201ENST00000453285 USP32Q8NFA0 1604 aa8.25□□□□□ -1.09
SDC4P-201ENST00000453285 TOPAZ1Q8N9V7 1692 aa8.24□□□□□ -1.09
SDC4P-201ENST00000453285 NALCNQ8IZF0 1738 aa8.24□□□□□ -1.09
SDC4P-201ENST00000453285 WASLO00401 505 aaPredicted RBP8.24□□□□□ -1.09
SDC4P-201ENST00000453285 CARD14Q9BXL6 1004 aa8.24□□□□□ -1.09
SDC4P-201ENST00000453285 CD163L1Q9NR16 1453 aa8.24□□□□□ -1.09
SDC4P-201ENST00000453285 ITSN1Q15811 1721 aa8.23□□□□□ -1.09
SDC4P-201ENST00000453285 FMN2Q9NZ56 1722 aa8.23□□□□□ -1.09
SDC4P-201ENST00000453285 ANKRD26Q9UPS8 1709 aa8.23□□□□□ -1.09
SDC4P-201ENST00000453285 KCNA6P17658 529 aa8.23□□□□□ -1.09
SDC4P-201ENST00000453285 HSPA2P54652 639 aa8.23□□□□□ -1.09
SDC4P-201ENST00000453285 CCDC184Q52MB2 194 aa8.23□□□□□ -1.09
SDC4P-201ENST00000453285 AMER1Q5JTC6 1135 aaPredicted RBP8.23□□□□□ -1.09
SDC4P-201ENST00000453285 XIRP1Q702N8 1843 aaKnown RBP8.23□□□□□ -1.09
SDC4P-201ENST00000453285 MON2Q7Z3U7 1717 aa8.23□□□□□ -1.09
SDC4P-201ENST00000453285 ATAD2Q6PL18 1390 aa8.22□□□□□ -1.09
SDC4P-201ENST00000453285 PARD3Q8TEW0 1356 aa8.22□□□□□ -1.09
SDC4P-201ENST00000453285 NPC1L1Q9UHC9 1359 aa8.22□□□□□ -1.09
SDC4P-201ENST00000453285 KIF20BQ96Q89 1820 aa8.22□□□□□ -1.09
SDC4P-201ENST00000453285 SRPK2P78362 688 aaKnown RBP8.22□□□□□ -1.09
SDC4P-201ENST00000453285 KTN1Q86UP2 1357 aaKnown RBP8.22□□□□□ -1.09
SDC4P-201ENST00000453285 ANKRD36BQ8N2N9 1353 aa8.22□□□□□ -1.09
SDC4P-201ENST00000453285 NINLQ9Y2I6 1382 aa8.22□□□□□ -1.09
SDC4P-201ENST00000453285 ATP7BP35670 1465 aa8.21□□□□□ -1.09
SDC4P-201ENST00000453285 RALBP1Q15311 655 aa8.21□□□□□ -1.1
SDC4P-201ENST00000453285 TMC1Q8TDI8 760 aa8.21□□□□□ -1.1
SDC4P-201ENST00000453285 PRR36Q9H6K5 1346 aa8.21□□□□□ -1.1
SDC4P-201ENST00000453285 NUDT16Q96DE0 195 aaKnown RBP8.2□□□□□ -1.1
SDC4P-201ENST00000453285 KNSTRNQ9Y448 316 aa8.2□□□□□ -1.1
SDC4P-201ENST00000453285 A0A1W2PP64 1363 aa8.2□□□□□ -1.1
SDC4P-201ENST00000453285 NSD3Q9BZ95 1437 aa8.2□□□□□ -1.1
SDC4P-201ENST00000453285 MAP2P11137 1827 aaKnown RBP8.19□□□□□ -1.1
SDC4P-201ENST00000453285 CDC42BPGQ6DT37 1551 aa8.19□□□□□ -1.1
SDC4P-201ENST00000453285 CNGB1Q14028 1251 aaPredicted RBP8.19□□□□□ -1.1
SDC4P-201ENST00000453285 CC2D1BQ5T0F9 858 aaKnown RBP8.19□□□□□ -1.1
SDC4P-201ENST00000453285 CABP1Q9NZU7 370 aa8.19□□□□□ -1.1
SDC4P-201ENST00000453285 CPSF1Q10570 1443 aaKnown RBP8.19□□□□□ -1.1
SDC4P-201ENST00000453285 CCDC61Q9Y6R9 512 aa8.18□□□□□ -1.1
SDC4P-201ENST00000453285 MYBBP1AQ9BQG0 1328 aaKnown RBP8.18□□□□□ -1.1
SDC4P-201ENST00000453285 PPIP5K1Q6PFW1 1433 aa8.18□□□□□ -1.1
SDC4P-201ENST00000453285 NKTRP30414 1462 aaKnown RBP8.18□□□□□ -1.1
SDC4P-201ENST00000453285 NRKQ7Z2Y5 1582 aa8.18□□□□□ -1.1
SDC4P-201ENST00000453285 PLEKHG3A1L390 1219 aa8.17□□□□□ -1.1
SDC4P-201ENST00000453285 TERF2IPQ9NYB0 399 aa8.17□□□□□ -1.1
SDC4P-201ENST00000453285 ADGRL3Q9HAR2 1447 aa8.17□□□□□ -1.1
SDC4P-201ENST00000453285 BRD4O60885 1362 aaPredicted RBP8.16□□□□□ -1.1
SDC4P-201ENST00000453285 ANKARQ7Z5J8 1434 aa8.16□□□□□ -1.1
SDC4P-201ENST00000453285 RBM33Q96EV2 1170 aaKnown RBP8.16□□□□□ -1.1
SDC4P-201ENST00000453285 MRS2Q9HD23 443 aa8.16□□□□□ -1.1
SDC4P-201ENST00000453285 NSD2O96028 1365 aa8.15□□□□□ -1.1
SDC4P-201ENST00000453285 CGNL1Q0VF96 1302 aa8.15□□□□□ -1.1
SDC4P-201ENST00000453285 PPP2R1AP30153 589 aa8.15□□□□□ -1.1
SDC4P-201ENST00000453285 HDGFL2Q7Z4V5 671 aaPredicted RBP8.15□□□□□ -1.1
SDC4P-201ENST00000453285 NLRP13Q86W25 1043 aa8.15□□□□□ -1.1
SDC4P-201ENST00000453285 MARF1Q9Y4F3 1742 aaKnown RBP8.15□□□□□ -1.11
SDC4P-201ENST00000453285 EDC4Q6P2E9 1401 aaKnown RBP8.14□□□□□ -1.11
SDC4P-201ENST00000453285 NCOA3Q9Y6Q9 1424 aa8.14□□□□□ -1.11
SDC4P-201ENST00000453285 NUTM2FA1L443 756 aa8.14□□□□□ -1.11
SDC4P-201ENST00000453285 FYB1O15117 783 aa8.14□□□□□ -1.11
SDC4P-201ENST00000453285 PROSER2Q86WR7 435 aaPredicted RBP8.14□□□□□ -1.11
SDC4P-201ENST00000453285 PNISRQ8TF01 805 aaKnown RBP8.14□□□□□ -1.11
SDC4P-201ENST00000453285 YTHDC1Q96MU7 727 aaKnown RBP8.14□□□□□ -1.11
SDC4P-201ENST00000453285 ZNF692Q9BU19 519 aaPredicted RBP8.14□□□□□ -1.11
SDC4P-201ENST00000453285 SSH2Q76I76 1423 aa8.13□□□□□ -1.11
SDC4P-201ENST00000453285 POLR3AO14802 1390 aaPredicted RBP8.13□□□□□ -1.11
SDC4P-201ENST00000453285 ACEP12821 1306 aa8.13□□□□□ -1.11
SDC4P-201ENST00000453285 SHPRHQ149N8 1683 aa8.13□□□□□ -1.11
SDC4P-201ENST00000453285 USP54Q70EL1 1684 aa8.13□□□□□ -1.11
SDC4P-201ENST00000453285 USP6P35125 1406 aa8.12□□□□□ -1.11
SDC4P-201ENST00000453285 TMEM94Q12767 1356 aa8.12□□□□□ -1.11
SDC4P-201ENST00000453285 MORC1Q86VD1 984 aa8.12□□□□□ -1.11
SDC4P-201ENST00000453285 GGNBP2Q9H3C7 697 aa8.12□□□□□ -1.11
SDC4P-201ENST00000453285 LRRC7Q96NW7 1537 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms