RNA–Protein interactions for RNA: ENST00000452977.5

CTDSP1-205, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-205ENST00000452977 NUTM2AQ8IVF1 878 aaPredicted RBP22.76■■□□□ 1.23
CTDSP1-205ENST00000452977 STK26Q9P289 416 aa22.75■■□□□ 1.23
CTDSP1-205ENST00000452977 PNPLA6Q8IY17 1366 aa22.75■■□□□ 1.23
CTDSP1-205ENST00000452977 NPHP3Q7Z494 1330 aa22.74■■□□□ 1.23
CTDSP1-205ENST00000452977 YTHDC2Q9H6S0 1430 aaKnown RBP22.74■■□□□ 1.23
CTDSP1-205ENST00000452977 SIRT1Q96EB6 747 aa22.73■■□□□ 1.23
CTDSP1-205ENST00000452977 SOS2Q07890 1332 aaPredicted RBP22.73■■□□□ 1.23
CTDSP1-205ENST00000452977 DHX57Q6P158 1386 aaKnown RBP22.73■■□□□ 1.23
CTDSP1-205ENST00000452977 NRXN1Q9ULB1 1477 aa22.73■■□□□ 1.23
CTDSP1-205ENST00000452977 ORAI2Q96SN7 254 aa22.72■■□□□ 1.23
CTDSP1-205ENST00000452977 C14orf93Q9H972 538 aaKnown RBP22.72■■□□□ 1.23
CTDSP1-205ENST00000452977 ESCO1Q5FWF5 840 aa22.71■■□□□ 1.23
CTDSP1-205ENST00000452977 DDX17Q92841 729 aaKnown RBP22.71■■□□□ 1.23
CTDSP1-205ENST00000452977 STAC3Q96MF2 364 aa22.71■■□□□ 1.23
CTDSP1-205ENST00000452977 TMEM132EQ6IEE7 984 aa22.7■■□□□ 1.22
CTDSP1-205ENST00000452977 WAPLQ7Z5K2 1190 aa22.69■■□□□ 1.22
CTDSP1-205ENST00000452977 AFF2P51816 1311 aa22.67■■□□□ 1.22
CTDSP1-205ENST00000452977 RXRBP28702 533 aa22.67■■□□□ 1.22
CTDSP1-205ENST00000452977 C8orf37Q96NL8 207 aa22.65■■□□□ 1.22
CTDSP1-205ENST00000452977 CFAP70Q5T0N1 1121 aa22.64■■□□□ 1.21
CTDSP1-205ENST00000452977 CDK12Q9NYV4 1490 aaPredicted RBP22.64■■□□□ 1.21
CTDSP1-205ENST00000452977 PLEKHH1Q9ULM0 1364 aa22.63■■□□□ 1.21
CTDSP1-205ENST00000452977 KIF1AQ12756 1690 aa22.62■■□□□ 1.21
CTDSP1-205ENST00000452977 NGLY1Q96IV0 654 aa22.62■■□□□ 1.21
CTDSP1-205ENST00000452977 FMN2Q9NZ56 1722 aa22.62■■□□□ 1.21
CTDSP1-205ENST00000452977 DLC1Q96QB1 1528 aa22.62■■□□□ 1.21
CTDSP1-205ENST00000452977 FOXO3O43524 673 aa22.61■■□□□ 1.21
CTDSP1-205ENST00000452977 COL22A1Q8NFW1 1626 aaPredicted RBP22.6■■□□□ 1.21
CTDSP1-205ENST00000452977 ADAMTS2O95450 1211 aa22.6■■□□□ 1.21
CTDSP1-205ENST00000452977 POGKQ9P215 609 aa22.6■■□□□ 1.21
CTDSP1-205ENST00000452977 PXDNQ92626 1479 aa22.6■■□□□ 1.21
CTDSP1-205ENST00000452977 NUTM2FA1L443 756 aa22.58■■□□□ 1.21
CTDSP1-205ENST00000452977 DCAF11Q8TEB1 546 aa22.58■■□□□ 1.21
CTDSP1-205ENST00000452977 PRAM1Q96QH2 718 aa22.58■■□□□ 1.21
CTDSP1-205ENST00000452977 RBM6P78332 1123 aaKnown RBP22.57■■□□□ 1.2
CTDSP1-205ENST00000452977 QTRT2Q9H974 415 aaKnown RBP22.57■■□□□ 1.2
CTDSP1-205ENST00000452977 EIF3AQ14152 1382 aaKnown RBP22.57■■□□□ 1.2
CTDSP1-205ENST00000452977 PSME1Q06323 249 aa22.55■■□□□ 1.2
CTDSP1-205ENST00000452977 KDM2AQ9Y2K7 1162 aa22.54■■□□□ 1.2
CTDSP1-205ENST00000452977 ANKARQ7Z5J8 1434 aa22.54■■□□□ 1.2
CTDSP1-205ENST00000452977 ADGRB1O14514 1584 aa22.54■■□□□ 1.2
CTDSP1-205ENST00000452977 USP21Q9UK80 565 aa22.53■■□□□ 1.2
CTDSP1-205ENST00000452977 TRPC5Q9UL62 973 aaPredicted RBP22.53■■□□□ 1.2
CTDSP1-205ENST00000452977 PHF8Q9UPP1 1060 aa22.53■■□□□ 1.2
CTDSP1-205ENST00000452977 ADGRB2O60241 1585 aa22.52■■□□□ 1.2
CTDSP1-205ENST00000452977 FNBP4Q8N3X1 1017 aaPredicted RBP22.52■■□□□ 1.2
CTDSP1-205ENST00000452977 XPCQ01831 940 aaPredicted RBP22.51■■□□□ 1.19
CTDSP1-205ENST00000452977 SAFB2Q14151 953 aaKnown RBP eCLIP22.51■■□□□ 1.19
CTDSP1-205ENST00000452977 SPATA31A3Q5VYP0 1347 aa22.51■■□□□ 1.19
CTDSP1-205ENST00000452977 KRT28Q7Z3Y7 464 aa22.5■■□□□ 1.19
CTDSP1-205ENST00000452977 TRAK1Q9UPV9 953 aa22.5■■□□□ 1.19
CTDSP1-205ENST00000452977 SBNO1A3KN83 1393 aa22.47■■□□□ 1.19
CTDSP1-205ENST00000452977 TNS3Q68CZ2 1445 aa22.47■■□□□ 1.19
CTDSP1-205ENST00000452977 HAP1P54257 671 aaPredicted RBP22.46■■□□□ 1.19
CTDSP1-205ENST00000452977 UPF1Q92900 1129 aaKnown RBP eCLIP22.46■■□□□ 1.194e-7■■■□□ 16.6
CTDSP1-205ENST00000452977 ARHGEF10O15013 1369 aa22.46■■□□□ 1.19
CTDSP1-205ENST00000452977 MARF1Q9Y4F3 1742 aaKnown RBP22.45■■□□□ 1.19
CTDSP1-205ENST00000452977 RGS12O14924 1447 aa22.45■■□□□ 1.18
CTDSP1-205ENST00000452977 RGPD8O14715 1765 aaPredicted RBP22.43■■□□□ 1.18
CTDSP1-205ENST00000452977 ATRNO75882 1429 aa22.43■■□□□ 1.18
CTDSP1-205ENST00000452977 TULP4Q9NRJ4 1543 aa22.42■■□□□ 1.18
CTDSP1-205ENST00000452977 GPRASP1Q5JY77 1395 aa22.42■■□□□ 1.18
CTDSP1-205ENST00000452977 MINK1Q8N4C8 1332 aaPredicted RBP22.42■■□□□ 1.18
CTDSP1-205ENST00000452977 WASLO00401 505 aaPredicted RBP22.41■■□□□ 1.18
CTDSP1-205ENST00000452977 KIAA1210Q9ULL0 1709 aa22.4■■□□□ 1.18
CTDSP1-205ENST00000452977 HIRIP3Q9BW71 556 aaPredicted RBP22.4■■□□□ 1.18
CTDSP1-205ENST00000452977 ATAD2Q6PL18 1390 aa22.39■■□□□ 1.18
CTDSP1-205ENST00000452977 USP32Q8NFA0 1604 aa22.39■■□□□ 1.18
CTDSP1-205ENST00000452977 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.38■■□□□ 1.17
CTDSP1-205ENST00000452977 LMOD2Q6P5Q4 547 aa22.38■■□□□ 1.17
CTDSP1-205ENST00000452977 PMFBP1Q8TBY8 1022 aa22.38■■□□□ 1.17
CTDSP1-205ENST00000452977 BCL9LQ86UU0 1499 aa22.38■■□□□ 1.17
CTDSP1-205ENST00000452977 ARHGEF28Q8N1W1 1705 aaKnown RBP22.37■■□□□ 1.17
CTDSP1-205ENST00000452977 UNC5CLQ8IV45 518 aa22.37■■□□□ 1.17
CTDSP1-205ENST00000452977 SLIT2O94813 1529 aa22.36■■□□□ 1.17
CTDSP1-205ENST00000452977 NGDNQ8NEJ9 315 aaKnown RBP22.35■■□□□ 1.17
CTDSP1-205ENST00000452977 GJD4Q96KN9 370 aaPredicted RBP22.35■■□□□ 1.17
CTDSP1-205ENST00000452977 ITSN1Q15811 1721 aa22.34■■□□□ 1.17
CTDSP1-205ENST00000452977 PRR36Q9H6K5 1346 aa22.31■■□□□ 1.16
CTDSP1-205ENST00000452977 NWD2Q9ULI1 1742 aa22.3■■□□□ 1.16
CTDSP1-205ENST00000452977 ATP7BP35670 1465 aa22.29■■□□□ 1.16
CTDSP1-205ENST00000452977 TRPM3Q9HCF6 1732 aaPredicted RBP22.29■■□□□ 1.16
CTDSP1-205ENST00000452977 CABLES1Q8TDN4 633 aa22.29■■□□□ 1.16
CTDSP1-205ENST00000452977 NUDT16Q96DE0 195 aaKnown RBP22.29■■□□□ 1.16
CTDSP1-205ENST00000452977 ABCA3Q99758 1704 aa22.28■■□□□ 1.16
CTDSP1-205ENST00000452977 RALGAPBQ86X10 1494 aa22.28■■□□□ 1.16
CTDSP1-205ENST00000452977 VPS72Q15906 364 aa22.27■■□□□ 1.16
CTDSP1-205ENST00000452977 CCDC125Q86Z20 511 aa22.27■■□□□ 1.16
CTDSP1-205ENST00000452977 CDK19Q9BWU1 502 aa22.27■■□□□ 1.16
CTDSP1-205ENST00000452977 ALS2Q96Q42 1657 aa22.26■■□□□ 1.15
CTDSP1-205ENST00000452977 PAK3O75914 559 aaPredicted RBP22.26■■□□□ 1.15
CTDSP1-205ENST00000452977 CCDC61Q9Y6R9 512 aa22.26■■□□□ 1.15
CTDSP1-205ENST00000452977 PLEKHG5O94827 1062 aa22.25■■□□□ 1.15
CTDSP1-205ENST00000452977 PLCH1Q4KWH8 1693 aa22.24■■□□□ 1.15
CTDSP1-205ENST00000452977 CCDC9Q9Y3X0 531 aaKnown RBP22.24■■□□□ 1.15
CTDSP1-205ENST00000452977 CENPJQ9HC77 1338 aaPredicted RBP22.24■■□□□ 1.15
CTDSP1-205ENST00000452977 NBPF1Q3BBV0 1214 aa22.23■■□□□ 1.15
CTDSP1-205ENST00000452977 GLI3P10071 1580 aa22.22■■□□□ 1.15
CTDSP1-205ENST00000452977 POLR3AO14802 1390 aaPredicted RBP22.22■■□□□ 1.15
CTDSP1-205ENST00000452977 COL14A1Q05707 1796 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms