RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 BANK1Q8NDB2 785 aa10.07□□□□□ -0.8
HMGB1P26-201ENST00000452520 SLC27A5Q9Y2P5 690 aa10.07□□□□□ -0.8
HMGB1P26-201ENST00000452520 MTMR2Q13614 643 aa10.06□□□□□ -0.8
HMGB1P26-201ENST00000452520 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
HMGB1P26-201ENST00000452520 SPDYE5A6NIY4 337 aa10.04□□□□□ -0.8
HMGB1P26-201ENST00000452520 SYMPKQ92797 1274 aaKnown RBP10.04□□□□□ -0.8
HMGB1P26-201ENST00000452520 ZMYND15Q9H091 742 aa10.04□□□□□ -0.8
HMGB1P26-201ENST00000452520 PCDHB3Q9Y5E6 796 aa10.04□□□□□ -0.8
HMGB1P26-201ENST00000452520 MCM6Q14566 821 aa10.03□□□□□ -0.8
HMGB1P26-201ENST00000452520 Q3C1V9 767 aa10.03□□□□□ -0.8
HMGB1P26-201ENST00000452520 SCUBE3Q8IX30 993 aa10.03□□□□□ -0.8
HMGB1P26-201ENST00000452520 SNRKQ9NRH2 765 aa10.03□□□□□ -0.8
HMGB1P26-201ENST00000452520 AP1G2O75843 785 aa10.02□□□□□ -0.81
HMGB1P26-201ENST00000452520 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
HMGB1P26-201ENST00000452520 NR1I2O75469 434 aa10.01□□□□□ -0.81
HMGB1P26-201ENST00000452520 PTPN5P54829 565 aa10.01□□□□□ -0.81
HMGB1P26-201ENST00000452520 NYAP1Q6ZVC0 841 aa10.01□□□□□ -0.81
HMGB1P26-201ENST00000452520 MYT1LQ9UL68 1186 aa10.01□□□□□ -0.81
HMGB1P26-201ENST00000452520 SALL2Q9Y467 1007 aaPredicted RBP10.01□□□□□ -0.81
HMGB1P26-201ENST00000452520 CFAP99D6REC4 459 aa10□□□□□ -0.81
HMGB1P26-201ENST00000452520 BRICD5Q6PL45 260 aa10□□□□□ -0.81
HMGB1P26-201ENST00000452520 BLOC1S3Q6QNY0 202 aa10□□□□□ -0.81
HMGB1P26-201ENST00000452520 CTDSPL2Q05D32 466 aa9.99□□□□□ -0.81
HMGB1P26-201ENST00000452520 RETREG3Q86VR2 466 aa9.99□□□□□ -0.81
HMGB1P26-201ENST00000452520 PRR7Q8TB68 274 aa9.99□□□□□ -0.81
HMGB1P26-201ENST00000452520 RNF19BQ6ZMZ0 732 aa9.98□□□□□ -0.81
HMGB1P26-201ENST00000452520 THAP11Q96EK4 314 aa9.98□□□□□ -0.81
HMGB1P26-201ENST00000452520 FMNL1O95466 1100 aaPredicted RBP9.97□□□□□ -0.81
HMGB1P26-201ENST00000452520 UBTFP17480 764 aaKnown RBP9.97□□□□□ -0.81
HMGB1P26-201ENST00000452520 USB1Q9BQ65 265 aaKnown RBP9.97□□□□□ -0.81
HMGB1P26-201ENST00000452520 USP17L8P0C7I0 530 aa9.96□□□□□ -0.82
HMGB1P26-201ENST00000452520 COPS2P61201 443 aa9.96□□□□□ -0.82
HMGB1P26-201ENST00000452520 MTMR14Q8NCE2 650 aa9.96□□□□□ -0.82
HMGB1P26-201ENST00000452520 TSC1Q92574 1164 aa9.96□□□□□ -0.82
HMGB1P26-201ENST00000452520 HELBQ8NG08 1087 aaPredicted RBP9.95□□□□□ -0.82
HMGB1P26-201ENST00000452520 CLUAP1Q96AJ1 413 aa9.95□□□□□ -0.82
HMGB1P26-201ENST00000452520 SOCS7O14512 581 aa9.94□□□□□ -0.82
HMGB1P26-201ENST00000452520 DESI1Q6ICB0 168 aa9.94□□□□□ -0.82
HMGB1P26-201ENST00000452520 SPNS2Q8IVW8 549 aa9.94□□□□□ -0.82
HMGB1P26-201ENST00000452520 A6NJR5 290 aa9.93□□□□□ -0.82
HMGB1P26-201ENST00000452520 MTRQ99707 1265 aa9.93□□□□□ -0.82
HMGB1P26-201ENST00000452520 ZPR1O75312 459 aa9.92□□□□□ -0.82
HMGB1P26-201ENST00000452520 TJAP1Q5JTD0 557 aa9.92□□□□□ -0.82
HMGB1P26-201ENST00000452520 POM121Q96HA1 1249 aa9.92□□□□□ -0.82
HMGB1P26-201ENST00000452520 SPSB2Q99619 263 aa9.92□□□□□ -0.82
HMGB1P26-201ENST00000452520 SUPT5HO00267 1087 aaKnown RBP9.91□□□□□ -0.82
HMGB1P26-201ENST00000452520 PER1O15534 1290 aaPredicted RBP9.91□□□□□ -0.82
HMGB1P26-201ENST00000452520 RAD21O60216 631 aa9.91□□□□□ -0.82
HMGB1P26-201ENST00000452520 FAM160A2Q8N612 972 aaPredicted RBP9.91□□□□□ -0.82
HMGB1P26-201ENST00000452520 LRRN4Q8WUT4 740 aa9.91□□□□□ -0.82
HMGB1P26-201ENST00000452520 COG6Q9Y2V7 657 aa9.91□□□□□ -0.82
HMGB1P26-201ENST00000452520 LYPD8Q6UX82 237 aa9.9□□□□□ -0.82
HMGB1P26-201ENST00000452520 HMX1Q9NP08 348 aaPredicted RBP9.9□□□□□ -0.82
HMGB1P26-201ENST00000452520 APBB1O00213 710 aa9.89□□□□□ -0.83
HMGB1P26-201ENST00000452520 ZNF516Q92618 1163 aa9.89□□□□□ -0.83
HMGB1P26-201ENST00000452520 GJD4Q96KN9 370 aaPredicted RBP9.89□□□□□ -0.83
HMGB1P26-201ENST00000452520 IL21Q9HBE4 155 aa9.89□□□□□ -0.83
HMGB1P26-201ENST00000452520 HCSTQ9UBK5 93 aa9.89□□□□□ -0.83
HMGB1P26-201ENST00000452520 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
HMGB1P26-201ENST00000452520 GDPD2Q9HCC8 539 aa9.88□□□□□ -0.83
HMGB1P26-201ENST00000452520 PRM3Q9NNZ6 103 aa9.88□□□□□ -0.83
HMGB1P26-201ENST00000452520 JUNDP17535 347 aa9.87□□□□□ -0.83
HMGB1P26-201ENST00000452520 MSS51Q4VC12 460 aa9.87□□□□□ -0.83
HMGB1P26-201ENST00000452520 TRIM34Q9BYJ4 488 aa9.87□□□□□ -0.83
HMGB1P26-201ENST00000452520 TRAK2O60296 914 aa9.86□□□□□ -0.83
HMGB1P26-201ENST00000452520 FNBP4Q8N3X1 1017 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P26-201ENST00000452520 TLL1O43897 1013 aa9.85□□□□□ -0.83
HMGB1P26-201ENST00000452520 ADH1BP00325 375 aa9.85□□□□□ -0.83
HMGB1P26-201ENST00000452520 TBC1D2BQ9UPU7 963 aa9.85□□□□□ -0.83
HMGB1P26-201ENST00000452520 DXOO77932 396 aaKnown RBP9.84□□□□□ -0.83
HMGB1P26-201ENST00000452520 MMP16P51512 607 aa9.84□□□□□ -0.83
HMGB1P26-201ENST00000452520 PROSER2Q86WR7 435 aaPredicted RBP9.84□□□□□ -0.83
HMGB1P26-201ENST00000452520 EPS8L1Q8TE68 723 aa9.84□□□□□ -0.83
HMGB1P26-201ENST00000452520 NDUFB9Q9Y6M9 179 aa9.84□□□□□ -0.83
HMGB1P26-201ENST00000452520 NR6A1Q15406 480 aa9.83□□□□□ -0.84
HMGB1P26-201ENST00000452520 PTPRNQ16849 979 aa9.83□□□□□ -0.84
HMGB1P26-201ENST00000452520 NKX2-3Q8TAU0 364 aa9.83□□□□□ -0.84
HMGB1P26-201ENST00000452520 ABL2P42684 1182 aa9.82□□□□□ -0.84
HMGB1P26-201ENST00000452520 PRDM9Q9NQV7 894 aa9.82□□□□□ -0.84
HMGB1P26-201ENST00000452520 SLC6A16Q9GZN6 736 aa9.81□□□□□ -0.84
HMGB1P26-201ENST00000452520 F12P00748 615 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P26-201ENST00000452520 EVA1BQ9NVM1 165 aa9.8□□□□□ -0.84
HMGB1P26-201ENST00000452520 KCNC4Q03721 635 aa9.79□□□□□ -0.84
HMGB1P26-201ENST00000452520 NUDT12Q9BQG2 462 aa9.79□□□□□ -0.84
HMGB1P26-201ENST00000452520 ZNF777Q9ULD5 760 aaPredicted RBP9.79□□□□□ -0.84
HMGB1P26-201ENST00000452520 ZNF330Q9Y3S2 320 aaPredicted RBP9.79□□□□□ -0.84
HMGB1P26-201ENST00000452520 GPR37L1O60883 481 aa9.78□□□□□ -0.84
HMGB1P26-201ENST00000452520 ITGBL1O95965 494 aaPredicted RBP9.78□□□□□ -0.84
HMGB1P26-201ENST00000452520 CCNYL3P0C7X3 344 aa9.78□□□□□ -0.84
HMGB1P26-201ENST00000452520 MMRN1Q13201 1228 aa9.78□□□□□ -0.84
HMGB1P26-201ENST00000452520 IRF5Q13568 498 aa9.78□□□□□ -0.84
HMGB1P26-201ENST00000452520 WWC1Q8IX03 1113 aa9.78□□□□□ -0.84
HMGB1P26-201ENST00000452520 MAP10Q9P2G4 905 aa9.78□□□□□ -0.84
HMGB1P26-201ENST00000452520 ARID3CA6NKF2 412 aa9.77□□□□□ -0.85
HMGB1P26-201ENST00000452520 CTHP32929 405 aa9.77□□□□□ -0.85
HMGB1P26-201ENST00000452520 KCNH2Q12809 1159 aa9.77□□□□□ -0.85
HMGB1P26-201ENST00000452520 S1PR4O95977 384 aa9.76□□□□□ -0.85
HMGB1P26-201ENST00000452520 C1orf115Q9H7X2 142 aa9.76□□□□□ -0.85
HMGB1P26-201ENST00000452520 PNMA1Q8ND90 353 aa9.75□□□□□ -0.85
HMGB1P26-201ENST00000452520 CCDC24Q8N4L8 307 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms