RNA–Protein interactions for RNA: ENST00000452193.5

SMARCA2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-215ENST00000452193 HRCP23327 699 aa17.18■□□□□ 0.34
SMARCA2-215ENST00000452193 RXRBP28702 533 aa17.18■□□□□ 0.34
SMARCA2-215ENST00000452193 LRPPRCP42704 1394 aaKnown RBP17.17■□□□□ 0.34
SMARCA2-215ENST00000452193 ABCC11Q96J66 1382 aa17.17■□□□□ 0.34
SMARCA2-215ENST00000452193 STAC3Q96MF2 364 aa17.17■□□□□ 0.34
SMARCA2-215ENST00000452193 NPHP3Q7Z494 1330 aa17.17■□□□□ 0.34
SMARCA2-215ENST00000452193 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
SMARCA2-215ENST00000452193 ORAI2Q96SN7 254 aa17.16■□□□□ 0.34
SMARCA2-215ENST00000452193 C14orf93Q9H972 538 aaKnown RBP17.16■□□□□ 0.34
SMARCA2-215ENST00000452193 SOS2Q07890 1332 aaPredicted RBP17.16■□□□□ 0.34
SMARCA2-215ENST00000452193 TMEM132EQ6IEE7 984 aa17.14■□□□□ 0.33
SMARCA2-215ENST00000452193 DDX17Q92841 729 aaKnown RBP17.14■□□□□ 0.33
SMARCA2-215ENST00000452193 DHX57Q6P158 1386 aaKnown RBP17.14■□□□□ 0.33
SMARCA2-215ENST00000452193 NGLY1Q96IV0 654 aa17.13■□□□□ 0.33
SMARCA2-215ENST00000452193 C8orf37Q96NL8 207 aa17.13■□□□□ 0.33
SMARCA2-215ENST00000452193 AFF2P51816 1311 aa17.13■□□□□ 0.33
SMARCA2-215ENST00000452193 PNPLA6Q8IY17 1366 aa17.13■□□□□ 0.33
SMARCA2-215ENST00000452193 RAB3GAP2Q9H2M9 1393 aa17.13■□□□□ 0.33
SMARCA2-215ENST00000452193 TECPR2O15040 1411 aa17.13■□□□□ 0.33
SMARCA2-215ENST00000452193 LRP6O75581 1613 aa17.12■□□□□ 0.33
SMARCA2-215ENST00000452193 WAPLQ7Z5K2 1190 aa17.12■□□□□ 0.33
SMARCA2-215ENST00000452193 SHPRHQ149N8 1683 aa17.12■□□□□ 0.33
SMARCA2-215ENST00000452193 PIK3C2GO75747 1445 aa17.12■□□□□ 0.33
SMARCA2-215ENST00000452193 QTRT2Q9H974 415 aaKnown RBP17.1■□□□□ 0.33
SMARCA2-215ENST00000452193 PPLO60437 1756 aa17.1■□□□□ 0.33
SMARCA2-215ENST00000452193 FOXO3O43524 673 aa17.09■□□□□ 0.33
SMARCA2-215ENST00000452193 ADAMTS2O95450 1211 aa17.09■□□□□ 0.33
SMARCA2-215ENST00000452193 RBM6P78332 1123 aaKnown RBP17.09■□□□□ 0.33
SMARCA2-215ENST00000452193 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
SMARCA2-215ENST00000452193 POGKQ9P215 609 aa17.08■□□□□ 0.32
SMARCA2-215ENST00000452193 PSME1Q06323 249 aa17.07■□□□□ 0.32
SMARCA2-215ENST00000452193 CFAP70Q5T0N1 1121 aa17.07■□□□□ 0.32
SMARCA2-215ENST00000452193 NALCNQ8IZF0 1738 aa17.07■□□□□ 0.32
SMARCA2-215ENST00000452193 NHSL1Q5SYE7 1610 aa17.07■□□□□ 0.32
SMARCA2-215ENST00000452193 SETD1AO15047 1707 aaKnown RBP17.05■□□□□ 0.32
SMARCA2-215ENST00000452193 NUTM2FA1L443 756 aa17.05■□□□□ 0.32
SMARCA2-215ENST00000452193 USP21Q9UK80 565 aa17.05■□□□□ 0.32
SMARCA2-215ENST00000452193 TRPC5Q9UL62 973 aaPredicted RBP17.05■□□□□ 0.32
SMARCA2-215ENST00000452193 CDC42BPGQ6DT37 1551 aa17.05■□□□□ 0.32
SMARCA2-215ENST00000452193 MYOM2P54296 1465 aa17.05■□□□□ 0.32
SMARCA2-215ENST00000452193 CDK12Q9NYV4 1490 aaPredicted RBP17.05■□□□□ 0.32
SMARCA2-215ENST00000452193 FNBP4Q8N3X1 1017 aaPredicted RBP17.04■□□□□ 0.32
SMARCA2-215ENST00000452193 DCAF11Q8TEB1 546 aa17.03■□□□□ 0.32
SMARCA2-215ENST00000452193 PRAM1Q96QH2 718 aa17.03■□□□□ 0.32
SMARCA2-215ENST00000452193 NRXN1Q9ULB1 1477 aa17.03■□□□□ 0.32
SMARCA2-215ENST00000452193 PHF8Q9UPP1 1060 aa17.02■□□□□ 0.32
SMARCA2-215ENST00000452193 KDM2AQ9Y2K7 1162 aa17.02■□□□□ 0.32
SMARCA2-215ENST00000452193 PLEKHH1Q9ULM0 1364 aa17.02■□□□□ 0.31
SMARCA2-215ENST00000452193 LAMC1P11047 1609 aa17.01■□□□□ 0.31
SMARCA2-215ENST00000452193 KRT28Q7Z3Y7 464 aa17.01■□□□□ 0.31
SMARCA2-215ENST00000452193 UPF1Q92900 1129 aaKnown RBP eCLIP17.01■□□□□ 0.31
SMARCA2-215ENST00000452193 XPCQ01831 940 aaPredicted RBP17■□□□□ 0.31
SMARCA2-215ENST00000452193 HAP1P54257 671 aaPredicted RBP16.99■□□□□ 0.31
SMARCA2-215ENST00000452193 EIF3AQ14152 1382 aaKnown RBP16.99■□□□□ 0.31
SMARCA2-215ENST00000452193 SPATA31A3Q5VYP0 1347 aa16.98■□□□□ 0.31
SMARCA2-215ENST00000452193 SAFB2Q14151 953 aaKnown RBP eCLIP16.98■□□□□ 0.31
SMARCA2-215ENST00000452193 TRAK1Q9UPV9 953 aa16.98■□□□□ 0.31
SMARCA2-215ENST00000452193 PXDNQ92626 1479 aa16.96■□□□□ 0.31
SMARCA2-215ENST00000452193 IFT172Q9UG01 1749 aa16.95■□□□□ 0.3
SMARCA2-215ENST00000452193 DLC1Q96QB1 1528 aa16.94■□□□□ 0.3
SMARCA2-215ENST00000452193 ANKARQ7Z5J8 1434 aa16.94■□□□□ 0.3
SMARCA2-215ENST00000452193 KNDC1Q76NI1 1749 aa16.93■□□□□ 0.3
SMARCA2-215ENST00000452193 SBNO1A3KN83 1393 aa16.93■□□□□ 0.3
SMARCA2-215ENST00000452193 ARHGEF10O15013 1369 aa16.93■□□□□ 0.3
SMARCA2-215ENST00000452193 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
SMARCA2-215ENST00000452193 GPRASP1Q5JY77 1395 aa16.92■□□□□ 0.3
SMARCA2-215ENST00000452193 WASLO00401 505 aaPredicted RBP16.92■□□□□ 0.3
SMARCA2-215ENST00000452193 UNC5CLQ8IV45 518 aa16.92■□□□□ 0.3
SMARCA2-215ENST00000452193 GJD4Q96KN9 370 aaPredicted RBP16.92■□□□□ 0.3
SMARCA2-215ENST00000452193 ATAD2Q6PL18 1390 aa16.91■□□□□ 0.3
SMARCA2-215ENST00000452193 CCDC125Q86Z20 511 aa16.91■□□□□ 0.3
SMARCA2-215ENST00000452193 COL22A1Q8NFW1 1626 aaPredicted RBP16.9■□□□□ 0.3
SMARCA2-215ENST00000452193 MYCNP04198 464 aaPredicted RBP16.9■□□□□ 0.3
SMARCA2-215ENST00000452193 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
SMARCA2-215ENST00000452193 MINK1Q8N4C8 1332 aaPredicted RBP16.9■□□□□ 0.3
SMARCA2-215ENST00000452193 ATRNO75882 1429 aa16.89■□□□□ 0.29
SMARCA2-215ENST00000452193 TNS3Q68CZ2 1445 aa16.89■□□□□ 0.29
SMARCA2-215ENST00000452193 NGDNQ8NEJ9 315 aaKnown RBP16.89■□□□□ 0.29
SMARCA2-215ENST00000452193 HIRIP3Q9BW71 556 aaPredicted RBP16.89■□□□□ 0.29
SMARCA2-215ENST00000452193 RGS12O14924 1447 aa16.88■□□□□ 0.29
SMARCA2-215ENST00000452193 KIF1AQ12756 1690 aa16.88■□□□□ 0.29
SMARCA2-215ENST00000452193 BCL9LQ86UU0 1499 aa16.87■□□□□ 0.29
SMARCA2-215ENST00000452193 FMN2Q9NZ56 1722 aa16.87■□□□□ 0.29
SMARCA2-215ENST00000452193 ADGRB1O14514 1584 aa16.86■□□□□ 0.29
SMARCA2-215ENST00000452193 VPS72Q15906 364 aa16.84■□□□□ 0.29
SMARCA2-215ENST00000452193 PAK3O75914 559 aaPredicted RBP16.83■□□□□ 0.28
SMARCA2-215ENST00000452193 CABLES1Q8TDN4 633 aa16.83■□□□□ 0.28
SMARCA2-215ENST00000452193 NUDT16Q96DE0 195 aaKnown RBP16.83■□□□□ 0.28
SMARCA2-215ENST00000452193 CCDC9Q9Y3X0 531 aaKnown RBP16.83■□□□□ 0.28
SMARCA2-215ENST00000452193 CDK19Q9BWU1 502 aa16.82■□□□□ 0.28
SMARCA2-215ENST00000452193 CCDC61Q9Y6R9 512 aa16.82■□□□□ 0.28
SMARCA2-215ENST00000452193 SLIT2O94813 1529 aa16.81■□□□□ 0.28
SMARCA2-215ENST00000452193 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
SMARCA2-215ENST00000452193 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
SMARCA2-215ENST00000452193 ADGRB2O60241 1585 aa16.81■□□□□ 0.28
SMARCA2-215ENST00000452193 FAM83GA6ND36 823 aa16.8■□□□□ 0.28
SMARCA2-215ENST00000452193 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
SMARCA2-215ENST00000452193 PRR36Q9H6K5 1346 aa16.79■□□□□ 0.28
SMARCA2-215ENST00000452193 ONECUT3O60422 494 aaPredicted RBP16.78■□□□□ 0.28
SMARCA2-215ENST00000452193 ATXN8OSP0DMR3 200 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms