RNA–Protein interactions for RNA: ENST00000451953.1

LINC01007-203, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 4 BASIC

Gene LINC01007, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-203ENST00000451953 SBNO2Q9Y2G9 1366 aa11.62□□□□□ -0.55
LINC01007-203ENST00000451953 SETD1AO15047 1707 aaKnown RBP11.61□□□□□ -0.55
LINC01007-203ENST00000451953 WASLO00401 505 aaPredicted RBP11.61□□□□□ -0.55
LINC01007-203ENST00000451953 TMEM94Q12767 1356 aa11.61□□□□□ -0.55
LINC01007-203ENST00000451953 DISP3Q9P2K9 1392 aa11.61□□□□□ -0.55
LINC01007-203ENST00000451953 KIF7Q2M1P5 1343 aa11.6□□□□□ -0.55
LINC01007-203ENST00000451953 NKTRP30414 1462 aaKnown RBP11.6□□□□□ -0.55
LINC01007-203ENST00000451953 C19orf44Q9H6X5 657 aa11.6□□□□□ -0.55
LINC01007-203ENST00000451953 CABP2Q9NPB3 220 aa11.6□□□□□ -0.55
LINC01007-203ENST00000451953 CPS1P31327 1500 aa11.6□□□□□ -0.55
LINC01007-203ENST00000451953 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
LINC01007-203ENST00000451953 CCDC7Q96M83 1385 aa11.59□□□□□ -0.55
LINC01007-203ENST00000451953 NUTM2FA1L443 756 aa11.58□□□□□ -0.56
LINC01007-203ENST00000451953 ATF3P18847 181 aa11.58□□□□□ -0.56
LINC01007-203ENST00000451953 PUS7Q96PZ0 661 aaKnown RBP11.58□□□□□ -0.56
LINC01007-203ENST00000451953 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
LINC01007-203ENST00000451953 TMC1Q8TDI8 760 aa11.57□□□□□ -0.56
LINC01007-203ENST00000451953 NCOA3Q9Y6Q9 1424 aa11.57□□□□□ -0.56
LINC01007-203ENST00000451953 NWD1Q149M9 1564 aa11.57□□□□□ -0.56
LINC01007-203ENST00000451953 MSH6P52701 1360 aa11.56□□□□□ -0.56
LINC01007-203ENST00000451953 DDX10Q13206 875 aaKnown RBP11.56□□□□□ -0.56
LINC01007-203ENST00000451953 NUDT16Q96DE0 195 aaKnown RBP11.56□□□□□ -0.56
LINC01007-203ENST00000451953 ADGRL3Q9HAR2 1447 aa11.56□□□□□ -0.56
LINC01007-203ENST00000451953 CADPS2Q86UW7 1296 aa11.55□□□□□ -0.56
LINC01007-203ENST00000451953 CCDC61Q9Y6R9 512 aa11.55□□□□□ -0.56
LINC01007-203ENST00000451953 LRRC7Q96NW7 1537 aa11.55□□□□□ -0.56
LINC01007-203ENST00000451953 KNDC1Q76NI1 1749 aa11.55□□□□□ -0.56
LINC01007-203ENST00000451953 ARHGEF28Q8N1W1 1705 aaKnown RBP11.55□□□□□ -0.56
LINC01007-203ENST00000451953 ATAD2Q6PL18 1390 aa11.54□□□□□ -0.56
LINC01007-203ENST00000451953 CHD2O14647 1828 aaKnown RBP11.54□□□□□ -0.56
LINC01007-203ENST00000451953 SLC12A5Q9H2X9 1139 aa11.54□□□□□ -0.56
LINC01007-203ENST00000451953 CABP1Q9NZU7 370 aa11.54□□□□□ -0.56
LINC01007-203ENST00000451953 TULP4Q9NRJ4 1543 aa11.53□□□□□ -0.56
LINC01007-203ENST00000451953 PRR36Q9H6K5 1346 aa11.53□□□□□ -0.56
LINC01007-203ENST00000451953 ESCO1Q5FWF5 840 aa11.52□□□□□ -0.57
LINC01007-203ENST00000451953 QRICH2Q9H0J4 1663 aa11.52□□□□□ -0.57
LINC01007-203ENST00000451953 PANK3Q9H999 370 aa11.51□□□□□ -0.57
LINC01007-203ENST00000451953 TERF2IPQ9NYB0 399 aa11.51□□□□□ -0.57
LINC01007-203ENST00000451953 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.5□□□□□ -0.57
LINC01007-203ENST00000451953 HDGFL2Q7Z4V5 671 aaPredicted RBP11.5□□□□□ -0.57
LINC01007-203ENST00000451953 NGDNQ8NEJ9 315 aaKnown RBP11.5□□□□□ -0.57
LINC01007-203ENST00000451953 SLAIN2Q9P270 581 aa11.5□□□□□ -0.57
LINC01007-203ENST00000451953 NINLQ9Y2I6 1382 aa11.5□□□□□ -0.57
LINC01007-203ENST00000451953 DCCP43146 1447 aa11.5□□□□□ -0.57
LINC01007-203ENST00000451953 ANKARQ7Z5J8 1434 aa11.5□□□□□ -0.57
LINC01007-203ENST00000451953 LTBP4Q8N2S1 1624 aa11.49□□□□□ -0.57
LINC01007-203ENST00000451953 PLEKHG3A1L390 1219 aa11.49□□□□□ -0.57
LINC01007-203ENST00000451953 PMFBP1Q8TBY8 1022 aa11.49□□□□□ -0.57
LINC01007-203ENST00000451953 ORAI2Q96SN7 254 aa11.49□□□□□ -0.57
LINC01007-203ENST00000451953 PHF8Q9UPP1 1060 aa11.49□□□□□ -0.57
LINC01007-203ENST00000451953 PPIP5K1Q6PFW1 1433 aa11.49□□□□□ -0.57
LINC01007-203ENST00000451953 ADGRB2O60241 1585 aa11.49□□□□□ -0.57
LINC01007-203ENST00000451953 CERKQ8TCT0 537 aa11.48□□□□□ -0.57
LINC01007-203ENST00000451953 STRCP1A6NGW2 1772 aa11.48□□□□□ -0.57
LINC01007-203ENST00000451953 CDC42BPGQ6DT37 1551 aa11.47□□□□□ -0.57
LINC01007-203ENST00000451953 ACEP12821 1306 aa11.47□□□□□ -0.57
LINC01007-203ENST00000451953 DIEXFQ68CQ4 756 aaKnown RBP11.47□□□□□ -0.57
LINC01007-203ENST00000451953 ZNF692Q9BU19 519 aaPredicted RBP11.47□□□□□ -0.57
LINC01007-203ENST00000451953 KNSTRNQ9Y448 316 aa11.47□□□□□ -0.57
LINC01007-203ENST00000451953 ATP7BP35670 1465 aa11.46□□□□□ -0.57
LINC01007-203ENST00000451953 C1orf167Q5SNV9 1468 aa11.46□□□□□ -0.57
LINC01007-203ENST00000451953 ANKRD36BQ8N2N9 1353 aa11.46□□□□□ -0.57
LINC01007-203ENST00000451953 FOXO3O43524 673 aa11.46□□□□□ -0.57
LINC01007-203ENST00000451953 TOM1O60784 492 aa11.46□□□□□ -0.57
LINC01007-203ENST00000451953 PSME1Q06323 249 aa11.46□□□□□ -0.57
LINC01007-203ENST00000451953 CARD14Q9BXL6 1004 aa11.46□□□□□ -0.57
LINC01007-203ENST00000451953 MST1RQ04912 1400 aa11.45□□□□□ -0.58
LINC01007-203ENST00000451953 UBAP1LF5GYI3 381 aa11.45□□□□□ -0.58
LINC01007-203ENST00000451953 CNGB1Q14028 1251 aaPredicted RBP11.45□□□□□ -0.58
LINC01007-203ENST00000451953 KTN1Q86UP2 1357 aaKnown RBP11.44□□□□□ -0.58
LINC01007-203ENST00000451953 BRINP3Q76B58 766 aa11.44□□□□□ -0.58
LINC01007-203ENST00000451953 NALCNQ8IZF0 1738 aa11.43□□□□□ -0.58
LINC01007-203ENST00000451953 A0A1W2PP64 1363 aa11.43□□□□□ -0.58
LINC01007-203ENST00000451953 PER1O15534 1290 aaPredicted RBP11.43□□□□□ -0.58
LINC01007-203ENST00000451953 PIP4K2BP78356 416 aa11.43□□□□□ -0.58
LINC01007-203ENST00000451953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC01007-203ENST00000451953 POLR3AO14802 1390 aaPredicted RBP11.42□□□□□ -0.58
LINC01007-203ENST00000451953 CGNL1Q0VF96 1302 aa11.42□□□□□ -0.58
LINC01007-203ENST00000451953 SCAF1Q9H7N4 1312 aaKnown RBP11.42□□□□□ -0.58
LINC01007-203ENST00000451953 PAK3O75914 559 aaPredicted RBP11.42□□□□□ -0.58
LINC01007-203ENST00000451953 XPCQ01831 940 aaPredicted RBP11.42□□□□□ -0.58
LINC01007-203ENST00000451953 CPSF1Q10570 1443 aaKnown RBP11.42□□□□□ -0.58
LINC01007-203ENST00000451953 NSD3Q9BZ95 1437 aa11.42□□□□□ -0.58
LINC01007-203ENST00000451953 NPHP3Q7Z494 1330 aa11.41□□□□□ -0.58
LINC01007-203ENST00000451953 KRT28Q7Z3Y7 464 aa11.41□□□□□ -0.58
LINC01007-203ENST00000451953 DDX17Q92841 729 aaKnown RBP11.41□□□□□ -0.58
LINC01007-203ENST00000451953 TTC21BQ7Z4L5 1316 aa11.4□□□□□ -0.58
LINC01007-203ENST00000451953 CD163L1Q9NR16 1453 aa11.4□□□□□ -0.58
LINC01007-203ENST00000451953 ANP32CO43423 234 aa11.4□□□□□ -0.58
LINC01007-203ENST00000451953 AMER1Q5JTC6 1135 aaPredicted RBP11.4□□□□□ -0.58
LINC01007-203ENST00000451953 CC2D1BQ5T0F9 858 aaKnown RBP11.4□□□□□ -0.58
LINC01007-203ENST00000451953 FMN2Q9NZ56 1722 aa11.4□□□□□ -0.58
LINC01007-203ENST00000451953 USP6P35125 1406 aa11.39□□□□□ -0.59
LINC01007-203ENST00000451953 LMOD2Q6P5Q4 547 aa11.39□□□□□ -0.59
LINC01007-203ENST00000451953 IQSEC2Q5JU85 1478 aa11.38□□□□□ -0.59
LINC01007-203ENST00000451953 EDC4Q6P2E9 1401 aaKnown RBP11.38□□□□□ -0.59
LINC01007-203ENST00000451953 FYB1O15117 783 aa11.38□□□□□ -0.59
LINC01007-203ENST00000451953 NME9Q86XW9 330 aa11.38□□□□□ -0.59
LINC01007-203ENST00000451953 GGNBP2Q9H3C7 697 aa11.38□□□□□ -0.59
LINC01007-203ENST00000451953 USP32Q8NFA0 1604 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms