RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ORAI2Q96SN7 254 aa31.67■■■□□ 2.66
C9orf3-208ENST00000451893 CDC42BPGQ6DT37 1551 aa31.67■■■□□ 2.66
C9orf3-208ENST00000451893 WAPLQ7Z5K2 1190 aa31.66■■■□□ 2.66
C9orf3-208ENST00000451893 MYOM2P54296 1465 aa31.65■■■□□ 2.66
C9orf3-208ENST00000451893 ESCO1Q5FWF5 840 aa31.65■■■□□ 2.66
C9orf3-208ENST00000451893 YTHDC2Q9H6S0 1430 aaKnown RBP31.65■■■□□ 2.66
C9orf3-208ENST00000451893 DHX57Q6P158 1386 aaKnown RBP31.64■■■□□ 2.66
C9orf3-208ENST00000451893 ABCC11Q96J66 1382 aa31.64■■■□□ 2.66
C9orf3-208ENST00000451893 TECPR2O15040 1411 aa31.64■■■□□ 2.66
C9orf3-208ENST00000451893 NUTM2FA1L443 756 aa31.62■■■□□ 2.65
C9orf3-208ENST00000451893 PCGF6Q9BYE7 350 aa31.62■■■□□ 2.65
C9orf3-208ENST00000451893 CFAP70Q5T0N1 1121 aa31.61■■■□□ 2.65
C9orf3-208ENST00000451893 C14orf93Q9H972 538 aaKnown RBP31.61■■■□□ 2.65
C9orf3-208ENST00000451893 HRCP23327 699 aa31.6■■■□□ 2.65
C9orf3-208ENST00000451893 PNPLA6Q8IY17 1366 aa31.59■■■□□ 2.65
C9orf3-208ENST00000451893 KDM2AQ9Y2K7 1162 aa31.59■■■□□ 2.65
C9orf3-208ENST00000451893 NPHP3Q7Z494 1330 aa31.57■■■□□ 2.64
C9orf3-208ENST00000451893 PLEKHH1Q9ULM0 1364 aa31.56■■■□□ 2.64
C9orf3-208ENST00000451893 C8orf37Q96NL8 207 aa31.56■■■□□ 2.64
C9orf3-208ENST00000451893 NRXN1Q9ULB1 1477 aa31.56■■■□□ 2.64
C9orf3-208ENST00000451893 SOS2Q07890 1332 aaPredicted RBP31.54■■■□□ 2.64
C9orf3-208ENST00000451893 DCAF11Q8TEB1 546 aa31.54■■■□□ 2.64
C9orf3-208ENST00000451893 POGKQ9P215 609 aa31.54■■■□□ 2.64
C9orf3-208ENST00000451893 AFF2P51816 1311 aa31.53■■■□□ 2.64
C9orf3-208ENST00000451893 SAFB2Q14151 953 aaKnown RBP eCLIP31.53■■■□□ 2.64
C9orf3-208ENST00000451893 ADAMTS2O95450 1211 aa31.52■■■□□ 2.64
C9orf3-208ENST00000451893 FMN2Q9NZ56 1722 aa31.51■■■□□ 2.63
C9orf3-208ENST00000451893 FOXO3O43524 673 aa31.5■■■□□ 2.63
C9orf3-208ENST00000451893 SIRT1Q96EB6 747 aa31.5■■■□□ 2.63
C9orf3-208ENST00000451893 RXRBP28702 533 aa31.49■■■□□ 2.63
C9orf3-208ENST00000451893 PRAM1Q96QH2 718 aa31.49■■■□□ 2.63
C9orf3-208ENST00000451893 XPCQ01831 940 aaPredicted RBP31.48■■■□□ 2.63
C9orf3-208ENST00000451893 NGLY1Q96IV0 654 aa31.48■■■□□ 2.63
C9orf3-208ENST00000451893 KIF1AQ12756 1690 aa31.46■■■□□ 2.63
C9orf3-208ENST00000451893 STAC3Q96MF2 364 aa31.45■■■□□ 2.63
C9orf3-208ENST00000451893 TRAK1Q9UPV9 953 aa31.44■■■□□ 2.62
C9orf3-208ENST00000451893 DLC1Q96QB1 1528 aa31.41■■■□□ 2.62
C9orf3-208ENST00000451893 RGPD8O14715 1765 aaPredicted RBP31.4■■■□□ 2.62
C9orf3-208ENST00000451893 PXDNQ92626 1479 aa31.4■■■□□ 2.62
C9orf3-208ENST00000451893 COL22A1Q8NFW1 1626 aaPredicted RBP31.38■■■□□ 2.61
C9orf3-208ENST00000451893 QTRT2Q9H974 415 aaKnown RBP31.38■■■□□ 2.61
C9orf3-208ENST00000451893 PHF8Q9UPP1 1060 aa31.37■■■□□ 2.61
C9orf3-208ENST00000451893 ADGRB1O14514 1584 aa31.36■■■□□ 2.61
C9orf3-208ENST00000451893 HAP1P54257 671 aaPredicted RBP31.35■■■□□ 2.61
C9orf3-208ENST00000451893 PSME1Q06323 249 aa31.34■■■□□ 2.61
C9orf3-208ENST00000451893 KRT28Q7Z3Y7 464 aa31.34■■■□□ 2.61
C9orf3-208ENST00000451893 USP21Q9UK80 565 aa31.34■■■□□ 2.61
C9orf3-208ENST00000451893 MINK1Q8N4C8 1332 aaPredicted RBP31.33■■■□□ 2.61
C9orf3-208ENST00000451893 HIRIP3Q9BW71 556 aaPredicted RBP31.33■■■□□ 2.61
C9orf3-208ENST00000451893 RBM6P78332 1123 aaKnown RBP31.32■■■□□ 2.6
C9orf3-208ENST00000451893 EIF3AQ14152 1382 aaKnown RBP31.31■■■□□ 2.6
C9orf3-208ENST00000451893 LMOD2Q6P5Q4 547 aa31.31■■■□□ 2.6
C9orf3-208ENST00000451893 CDK12Q9NYV4 1490 aaPredicted RBP31.29■■■□□ 2.6
C9orf3-208ENST00000451893 ADGRB2O60241 1585 aa31.29■■■□□ 2.6
C9orf3-208ENST00000451893 MARF1Q9Y4F3 1742 aaKnown RBP31.29■■■□□ 2.6
C9orf3-208ENST00000451893 PLEKHG5O94827 1062 aa31.28■■■□□ 2.6
C9orf3-208ENST00000451893 ANKARQ7Z5J8 1434 aa31.28■■■□□ 2.6
C9orf3-208ENST00000451893 TRPC5Q9UL62 973 aaPredicted RBP31.28■■■□□ 2.6
C9orf3-208ENST00000451893 SPATA31A3Q5VYP0 1347 aa31.27■■■□□ 2.6
C9orf3-208ENST00000451893 PMFBP1Q8TBY8 1022 aa31.27■■■□□ 2.6
C9orf3-208ENST00000451893 TNS3Q68CZ2 1445 aa31.24■■■□□ 2.59
C9orf3-208ENST00000451893 ARHGEF28Q8N1W1 1705 aaKnown RBP31.23■■■□□ 2.59
C9orf3-208ENST00000451893 FNBP4Q8N3X1 1017 aaPredicted RBP31.21■■■□□ 2.59
C9orf3-208ENST00000451893 USP32Q8NFA0 1604 aa31.2■■■□□ 2.59
C9orf3-208ENST00000451893 GPRASP1Q5JY77 1395 aa31.2■■■□□ 2.59
C9orf3-208ENST00000451893 WASLO00401 505 aaPredicted RBP31.2■■■□□ 2.59
C9orf3-208ENST00000451893 RGS12O14924 1447 aa31.2■■■□□ 2.59
C9orf3-208ENST00000451893 TULP4Q9NRJ4 1543 aa31.19■■■□□ 2.58
C9orf3-208ENST00000451893 KIAA1210Q9ULL0 1709 aa31.19■■■□□ 2.58
C9orf3-208ENST00000451893 ARHGEF10O15013 1369 aa31.18■■■□□ 2.58
C9orf3-208ENST00000451893 SBNO1A3KN83 1393 aa31.17■■■□□ 2.58
C9orf3-208ENST00000451893 NGDNQ8NEJ9 315 aaKnown RBP31.16■■■□□ 2.58
C9orf3-208ENST00000451893 UPF1Q92900 1129 aaKnown RBP eCLIP31.16■■■□□ 2.58
C9orf3-208ENST00000451893 ITSN1Q15811 1721 aa31.15■■■□□ 2.58
C9orf3-208ENST00000451893 ATRNO75882 1429 aa31.13■■■□□ 2.57
C9orf3-208ENST00000451893 CABLES1Q8TDN4 633 aa31.12■■■□□ 2.57
C9orf3-208ENST00000451893 PAK3O75914 559 aaPredicted RBP31.11■■■□□ 2.57
C9orf3-208ENST00000451893 PRR36Q9H6K5 1346 aa31.1■■■□□ 2.57
C9orf3-208ENST00000451893 NEUROD1Q13562 356 aa31.09■■■□□ 2.57
C9orf3-208ENST00000451893 UNC5CLQ8IV45 518 aa31.08■■■□□ 2.57
C9orf3-208ENST00000451893 BCL9LQ86UU0 1499 aa31.08■■■□□ 2.57
C9orf3-208ENST00000451893 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.07■■■□□ 2.56
C9orf3-208ENST00000451893 NBPF1Q3BBV0 1214 aa31.06■■■□□ 2.56
C9orf3-208ENST00000451893 NUDT16Q96DE0 195 aaKnown RBP31.06■■■□□ 2.56
C9orf3-208ENST00000451893 CCDC9Q9Y3X0 531 aaKnown RBP31.06■■■□□ 2.56
C9orf3-208ENST00000451893 ABCA3Q99758 1704 aa31.06■■■□□ 2.56
C9orf3-208ENST00000451893 ATAD2Q6PL18 1390 aa31.05■■■□□ 2.56
C9orf3-208ENST00000451893 GJD4Q96KN9 370 aaPredicted RBP31.05■■■□□ 2.56
C9orf3-208ENST00000451893 CDK19Q9BWU1 502 aa31.05■■■□□ 2.56
C9orf3-208ENST00000451893 TRPM3Q9HCF6 1732 aaPredicted RBP31.04■■■□□ 2.56
C9orf3-208ENST00000451893 L3MBTL2Q969R5 705 aa31.02■■■□□ 2.56
C9orf3-208ENST00000451893 SIN3AQ96ST3 1273 aa31.02■■■□□ 2.56
C9orf3-208ENST00000451893 PLCH1Q4KWH8 1693 aa31.02■■■□□ 2.56
C9orf3-208ENST00000451893 SLIT2O94813 1529 aa31.02■■■□□ 2.56
C9orf3-208ENST00000451893 ATP7BP35670 1465 aa31.01■■■□□ 2.56
C9orf3-208ENST00000451893 CENPJQ9HC77 1338 aaPredicted RBP31■■■□□ 2.55
C9orf3-208ENST00000451893 SRPK2P78362 688 aaKnown RBP31■■■□□ 2.55
C9orf3-208ENST00000451893 ALS2Q96Q42 1657 aa30.99■■■□□ 2.55
C9orf3-208ENST00000451893 NWD2Q9ULI1 1742 aa30.98■■■□□ 2.55
C9orf3-208ENST00000451893 CCDC61Q9Y6R9 512 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms