RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 SLC52A1Q9NWF4 448 aa15.91■□□□□ 0.14
COL27A1-202ENST00000451716 ARHGAP31Q2M1Z3 1444 aa15.9■□□□□ 0.14
COL27A1-202ENST00000451716 DUSP27Q5VZP5 1158 aa15.89■□□□□ 0.13
COL27A1-202ENST00000451716 GLI2P10070 1586 aa15.89■□□□□ 0.13
COL27A1-202ENST00000451716 GOLGA2Q08379 1002 aa15.89■□□□□ 0.13
COL27A1-202ENST00000451716 C20orf194Q5TEA3 1177 aa15.89■□□□□ 0.13
COL27A1-202ENST00000451716 SPINK5Q9NQ38 1064 aaPredicted RBP15.89■□□□□ 0.13
COL27A1-202ENST00000451716 ZNF521Q96K83 1311 aa15.88■□□□□ 0.13
COL27A1-202ENST00000451716 MYO5BQ9ULV0 1848 aa15.88■□□□□ 0.13
COL27A1-202ENST00000451716 STAG3Q9UJ98 1225 aa15.87■□□□□ 0.13
COL27A1-202ENST00000451716 EVC2Q86UK5 1308 aa15.87■□□□□ 0.13
COL27A1-202ENST00000451716 CRBNQ96SW2 442 aa15.87■□□□□ 0.13
COL27A1-202ENST00000451716 ZC3H13Q5T200 1668 aaKnown RBP15.86■□□□□ 0.13
COL27A1-202ENST00000451716 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
COL27A1-202ENST00000451716 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
COL27A1-202ENST00000451716 DIP2BQ9P265 1576 aa15.86■□□□□ 0.13
COL27A1-202ENST00000451716 MINK1Q8N4C8 1332 aaPredicted RBP15.85■□□□□ 0.13
COL27A1-202ENST00000451716 SRPK2P78362 688 aaKnown RBP15.85■□□□□ 0.13
COL27A1-202ENST00000451716 TULP4Q9NRJ4 1543 aa15.84■□□□□ 0.13
COL27A1-202ENST00000451716 PREX1Q8TCU6 1659 aa15.84■□□□□ 0.13
COL27A1-202ENST00000451716 SLFN5Q08AF3 891 aa15.84■□□□□ 0.13
COL27A1-202ENST00000451716 NEUROD2Q15784 382 aa15.84■□□□□ 0.13
COL27A1-202ENST00000451716 FANCIQ9NVI1 1328 aa15.84■□□□□ 0.13
COL27A1-202ENST00000451716 PRAM1Q96QH2 718 aa15.84■□□□□ 0.13
COL27A1-202ENST00000451716 MTHFSP49914 203 aa15.83■□□□□ 0.13
COL27A1-202ENST00000451716 CGNL1Q0VF96 1302 aa15.83■□□□□ 0.13
COL27A1-202ENST00000451716 ARHGEF28Q8N1W1 1705 aaKnown RBP15.83■□□□□ 0.13
COL27A1-202ENST00000451716 RRP7AQ9Y3A4 280 aaKnown RBP15.82■□□□□ 0.12
COL27A1-202ENST00000451716 TMEM131LA2VDJ0 1609 aa15.82■□□□□ 0.12
COL27A1-202ENST00000451716 SKAP1Q86WV1 359 aa15.82■□□□□ 0.12
COL27A1-202ENST00000451716 POGKQ9P215 609 aa15.82■□□□□ 0.12
COL27A1-202ENST00000451716 POLR3AO14802 1390 aaPredicted RBP15.81■□□□□ 0.12
COL27A1-202ENST00000451716 IL27Q8NEV9 243 aa15.81■□□□□ 0.12
COL27A1-202ENST00000451716 ZFYVE9O95405 1425 aa15.79■□□□□ 0.12
COL27A1-202ENST00000451716 ANKRD36BQ8N2N9 1353 aa15.79■□□□□ 0.12
COL27A1-202ENST00000451716 GGNBP2Q9H3C7 697 aa15.78■□□□□ 0.12
COL27A1-202ENST00000451716 TRMT2AQ8IZ69 625 aaKnown RBP15.78■□□□□ 0.12
COL27A1-202ENST00000451716 A0A1W2PP64 1363 aa15.77■□□□□ 0.12
COL27A1-202ENST00000451716 BCAR3O75815 825 aa15.77■□□□□ 0.12
COL27A1-202ENST00000451716 YTHDC2Q9H6S0 1430 aaKnown RBP15.77■□□□□ 0.12
COL27A1-202ENST00000451716 AEBP2Q6ZN18 517 aaPredicted RBP15.77■□□□□ 0.12
COL27A1-202ENST00000451716 WWC1Q8IX03 1113 aa15.77■□□□□ 0.12
COL27A1-202ENST00000451716 PTPRMP28827 1452 aa15.76■□□□□ 0.11
COL27A1-202ENST00000451716 WAPLQ7Z5K2 1190 aa15.76■□□□□ 0.11
COL27A1-202ENST00000451716 E9PSI1 815 aa15.75■□□□□ 0.11
COL27A1-202ENST00000451716 PDE4CQ08493 712 aa15.75■□□□□ 0.11
COL27A1-202ENST00000451716 TCP11L2Q8N4U5 519 aa15.75■□□□□ 0.11
COL27A1-202ENST00000451716 PUS7Q96PZ0 661 aaKnown RBP15.75■□□□□ 0.11
COL27A1-202ENST00000451716 CLTCQ00610 1675 aaKnown RBP15.75■□□□□ 0.11
COL27A1-202ENST00000451716 CFAP53Q96M91 514 aa15.74■□□□□ 0.11
COL27A1-202ENST00000451716 CDK19Q9BWU1 502 aa15.74■□□□□ 0.11
COL27A1-202ENST00000451716 U2AF1L5P0DN76 240 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-202ENST00000451716 U2AF1Q01081 240 aaKnown RBP eCLIP15.73■□□□□ 0.11
COL27A1-202ENST00000451716 RUNDC1Q96C34 613 aa15.73■□□□□ 0.11
COL27A1-202ENST00000451716 SHPRHQ149N8 1683 aa15.73■□□□□ 0.11
COL27A1-202ENST00000451716 ALKQ9UM73 1620 aa15.73■□□□□ 0.11
COL27A1-202ENST00000451716 NKTRP30414 1462 aaKnown RBP15.73■□□□□ 0.11
COL27A1-202ENST00000451716 CABP1Q9NZU7 370 aa15.73■□□□□ 0.11
COL27A1-202ENST00000451716 FYB1O15117 783 aa15.71■□□□□ 0.11
COL27A1-202ENST00000451716 A2ML1A8K2U0 1454 aa15.71■□□□□ 0.11
COL27A1-202ENST00000451716 A0A0U1RQG5 324 aaPredicted RBP15.71■□□□□ 0.11
COL27A1-202ENST00000451716 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.11
COL27A1-202ENST00000451716 PDIA4P13667 645 aaKnown RBP15.7■□□□□ 0.1
COL27A1-202ENST00000451716 ESF1Q9H501 851 aaKnown RBP15.7■□□□□ 0.1
COL27A1-202ENST00000451716 TERF2IPQ9NYB0 399 aa15.7■□□□□ 0.1
COL27A1-202ENST00000451716 ABCC11Q96J66 1382 aa15.7■□□□□ 0.1
COL27A1-202ENST00000451716 U2SURPO15042 1029 aaKnown RBP15.7■□□□□ 0.1
COL27A1-202ENST00000451716 AGLP35573 1532 aa15.7■□□□□ 0.1
COL27A1-202ENST00000451716 RIMS2Q9UQ26 1411 aa15.7■□□□□ 0.1
COL27A1-202ENST00000451716 USP32Q8NFA0 1604 aa15.7■□□□□ 0.1
COL27A1-202ENST00000451716 FBLN1P23142 703 aa15.69■□□□□ 0.1
COL27A1-202ENST00000451716 ZMYND15Q9H091 742 aa15.69■□□□□ 0.1
COL27A1-202ENST00000451716 PPP6R1Q9UPN7 881 aa15.69■□□□□ 0.1
COL27A1-202ENST00000451716 ATAD2Q6PL18 1390 aa15.69■□□□□ 0.1
COL27A1-202ENST00000451716 TCERG1O14776 1098 aaKnown RBP15.69■□□□□ 0.1
COL27A1-202ENST00000451716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL27A1-202ENST00000451716 NSD2O96028 1365 aa15.68■□□□□ 0.1
COL27A1-202ENST00000451716 CD163L1Q9NR16 1453 aa15.68■□□□□ 0.1
COL27A1-202ENST00000451716 NPM2Q86SE8 214 aaKnown RBP15.68■□□□□ 0.1
COL27A1-202ENST00000451716 NGEFQ8N5V2 710 aa15.67■□□□□ 0.1
COL27A1-202ENST00000451716 PDE4AP27815 886 aa15.67■□□□□ 0.1
COL27A1-202ENST00000451716 ZMYM3Q14202 1370 aa15.67■□□□□ 0.1
COL27A1-202ENST00000451716 REREQ9P2R6 1566 aa15.67■□□□□ 0.1
COL27A1-202ENST00000451716 HDGFL2Q7Z4V5 671 aaPredicted RBP15.66■□□□□ 0.1
COL27A1-202ENST00000451716 TXNDC2Q86VQ3 553 aa15.66■□□□□ 0.1
COL27A1-202ENST00000451716 FRAT1Q92837 279 aaPredicted RBP15.66■□□□□ 0.1
COL27A1-202ENST00000451716 BCL2L13Q9BXK5 485 aa15.66■□□□□ 0.1
COL27A1-202ENST00000451716 SPATA31D1Q6ZQQ2 1576 aa15.66■□□□□ 0.1
COL27A1-202ENST00000451716 NINLQ9Y2I6 1382 aa15.66■□□□□ 0.1
COL27A1-202ENST00000451716 KLHL34Q8N239 644 aa15.65■□□□□ 0.1
COL27A1-202ENST00000451716 ARHGEF40Q8TER5 1519 aa15.65■□□□□ 0.1
COL27A1-202ENST00000451716 IQSEC2Q5JU85 1478 aa15.65■□□□□ 0.1
COL27A1-202ENST00000451716 PAK3O75914 559 aaPredicted RBP15.65■□□□□ 0.1
COL27A1-202ENST00000451716 KDM2BQ8NHM5 1336 aa15.65■□□□□ 0.1
COL27A1-202ENST00000451716 PPM1GO15355 546 aaPredicted RBP15.65■□□□□ 0.1
COL27A1-202ENST00000451716 CANXP27824 592 aaKnown RBP15.65■□□□□ 0.1
COL27A1-202ENST00000451716 ANP32AP39687 249 aaKnown RBP15.65■□□□□ 0.1
COL27A1-202ENST00000451716 PANK1Q8TE04 598 aa15.65■□□□□ 0.1
COL27A1-202ENST00000451716 METP08581 1390 aa15.64■□□□□ 0.09
COL27A1-202ENST00000451716 PHF23Q9BUL5 403 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms