RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 RAB3GAP2Q9H2M9 1393 aa24.39■■□□□ 1.49
RPUSD3-209ENST00000451405 USP21Q9UK80 565 aa24.38■■□□□ 1.49
RPUSD3-209ENST00000451405 ACIN1Q9UKV3 1341 aaKnown RBP24.36■■□□□ 1.49
RPUSD3-209ENST00000451405 TRPC5Q9UL62 973 aaPredicted RBP24.36■■□□□ 1.49
RPUSD3-209ENST00000451405 PRAG1Q86YV5 1406 aa24.35■■□□□ 1.49
RPUSD3-209ENST00000451405 IFT172Q9UG01 1749 aa24.35■■□□□ 1.49
RPUSD3-209ENST00000451405 ANKRD30BQ9BXX2 1392 aa24.35■■□□□ 1.49
RPUSD3-209ENST00000451405 C1orf167Q5SNV9 1468 aa24.34■■□□□ 1.49
RPUSD3-209ENST00000451405 TMEM132EQ6IEE7 984 aa24.34■■□□□ 1.49
RPUSD3-209ENST00000451405 STK26Q9P289 416 aa24.34■■□□□ 1.49
RPUSD3-209ENST00000451405 NHSL1Q5SYE7 1610 aa24.33■■□□□ 1.49
RPUSD3-209ENST00000451405 ORAI2Q96SN7 254 aa24.32■■□□□ 1.48
RPUSD3-209ENST00000451405 WAPLQ7Z5K2 1190 aa24.31■■□□□ 1.48
RPUSD3-209ENST00000451405 PIK3C2GO75747 1445 aa24.28■■□□□ 1.48
RPUSD3-209ENST00000451405 CCDC125Q86Z20 511 aa24.27■■□□□ 1.48
RPUSD3-209ENST00000451405 LRPPRCP42704 1394 aaKnown RBP24.27■■□□□ 1.48
RPUSD3-209ENST00000451405 FNBP4Q8N3X1 1017 aaPredicted RBP24.26■■□□□ 1.47
RPUSD3-209ENST00000451405 C14orf93Q9H972 538 aaKnown RBP24.25■■□□□ 1.47
RPUSD3-209ENST00000451405 ABCC11Q96J66 1382 aa24.25■■□□□ 1.47
RPUSD3-209ENST00000451405 CFAP70Q5T0N1 1121 aa24.24■■□□□ 1.47
RPUSD3-209ENST00000451405 SOS2Q07890 1332 aaPredicted RBP24.24■■□□□ 1.47
RPUSD3-209ENST00000451405 PLEKHH1Q9ULM0 1364 aa24.24■■□□□ 1.47
RPUSD3-209ENST00000451405 TECPR2O15040 1411 aa24.24■■□□□ 1.47
RPUSD3-209ENST00000451405 YTHDC2Q9H6S0 1430 aaKnown RBP24.21■■□□□ 1.47
RPUSD3-209ENST00000451405 LAMC1P11047 1609 aa24.21■■□□□ 1.47
RPUSD3-209ENST00000451405 NRXN1Q9ULB1 1477 aa24.2■■□□□ 1.47
RPUSD3-209ENST00000451405 NUTM2FA1L443 756 aa24.2■■□□□ 1.46
RPUSD3-209ENST00000451405 HRCP23327 699 aa24.2■■□□□ 1.46
RPUSD3-209ENST00000451405 ESCO1Q5FWF5 840 aa24.2■■□□□ 1.46
RPUSD3-209ENST00000451405 CDC42BPGQ6DT37 1551 aa24.18■■□□□ 1.46
RPUSD3-209ENST00000451405 KNDC1Q76NI1 1749 aa24.18■■□□□ 1.46
RPUSD3-209ENST00000451405 ATRNO75882 1429 aa24.18■■□□□ 1.46
RPUSD3-209ENST00000451405 SIRT1Q96EB6 747 aa24.17■■□□□ 1.46
RPUSD3-209ENST00000451405 MYOM2P54296 1465 aa24.17■■□□□ 1.46
RPUSD3-209ENST00000451405 FOXO3O43524 673 aa24.14■■□□□ 1.45
RPUSD3-209ENST00000451405 GJD4Q96KN9 370 aaPredicted RBP24.14■■□□□ 1.45
RPUSD3-209ENST00000451405 KDM2AQ9Y2K7 1162 aa24.14■■□□□ 1.45
RPUSD3-209ENST00000451405 DHX57Q6P158 1386 aaKnown RBP24.14■■□□□ 1.45
RPUSD3-209ENST00000451405 NPHP3Q7Z494 1330 aa24.12■■□□□ 1.45
RPUSD3-209ENST00000451405 XPCQ01831 940 aaPredicted RBP24.12■■□□□ 1.45
RPUSD3-209ENST00000451405 DCAF11Q8TEB1 546 aa24.11■■□□□ 1.45
RPUSD3-209ENST00000451405 SAFB2Q14151 953 aaKnown RBP eCLIP24.1■■□□□ 1.45
RPUSD3-209ENST00000451405 SF3B2Q13435 895 aaKnown RBP24.09■■□□□ 1.45
RPUSD3-209ENST00000451405 PRAM1Q96QH2 718 aa24.09■■□□□ 1.45
RPUSD3-209ENST00000451405 BCL9LQ86UU0 1499 aa24.08■■□□□ 1.45
RPUSD3-209ENST00000451405 PXDNQ92626 1479 aa24.08■■□□□ 1.45
RPUSD3-209ENST00000451405 FMN2Q9NZ56 1722 aa24.08■■□□□ 1.45
RPUSD3-209ENST00000451405 EP400Q96L91 3159 aa24.07■■□□□ 1.44
RPUSD3-209ENST00000451405 TRAK1Q9UPV9 953 aa24.05■■□□□ 1.44
RPUSD3-209ENST00000451405 ADGRB1O14514 1584 aa24.04■■□□□ 1.44
RPUSD3-209ENST00000451405 UNC5CLQ8IV45 518 aa24.04■■□□□ 1.44
RPUSD3-209ENST00000451405 POGKQ9P215 609 aa24.04■■□□□ 1.44
RPUSD3-209ENST00000451405 RGPD8O14715 1765 aaPredicted RBP24.03■■□□□ 1.44
RPUSD3-209ENST00000451405 COL22A1Q8NFW1 1626 aaPredicted RBP24.02■■□□□ 1.44
RPUSD3-209ENST00000451405 BLMP54132 1417 aaPredicted RBP24.02■■□□□ 1.44
RPUSD3-209ENST00000451405 DEFB132Q7Z7B7 95 aa24.02■■□□□ 1.44
RPUSD3-209ENST00000451405 DLC1Q96QB1 1528 aa24.01■■□□□ 1.43
RPUSD3-209ENST00000451405 KRT28Q7Z3Y7 464 aa24.01■■□□□ 1.43
RPUSD3-209ENST00000451405 HAP1P54257 671 aaPredicted RBP24■■□□□ 1.43
RPUSD3-209ENST00000451405 STAC3Q96MF2 364 aa24■■□□□ 1.43
RPUSD3-209ENST00000451405 PHF8Q9UPP1 1060 aa24■■□□□ 1.43
RPUSD3-209ENST00000451405 HIRIP3Q9BW71 556 aaPredicted RBP23.98■■□□□ 1.43
RPUSD3-209ENST00000451405 SPATA31A3Q5VYP0 1347 aa23.97■■□□□ 1.43
RPUSD3-209ENST00000451405 SEPT12Q8IYM1 358 aa23.97■■□□□ 1.43
RPUSD3-209ENST00000451405 CCDC9Q9Y3X0 531 aaKnown RBP23.97■■□□□ 1.43
RPUSD3-209ENST00000451405 KIF1AQ12756 1690 aa23.96■■□□□ 1.43
RPUSD3-209ENST00000451405 RALGAPBQ86X10 1494 aa23.96■■□□□ 1.43
RPUSD3-209ENST00000451405 MINK1Q8N4C8 1332 aaPredicted RBP23.95■■□□□ 1.42
RPUSD3-209ENST00000451405 PMFBP1Q8TBY8 1022 aa23.94■■□□□ 1.42
RPUSD3-209ENST00000451405 USP32Q8NFA0 1604 aa23.93■■□□□ 1.42
RPUSD3-209ENST00000451405 PLEKHG5O94827 1062 aa23.93■■□□□ 1.42
RPUSD3-209ENST00000451405 PSME1Q06323 249 aa23.91■■□□□ 1.42
RPUSD3-209ENST00000451405 ADGRB2O60241 1585 aa23.91■■□□□ 1.42
RPUSD3-209ENST00000451405 PRR36Q9H6K5 1346 aa23.9■■□□□ 1.42
RPUSD3-209ENST00000451405 A0A0G2JS52 829 aa23.9■■□□□ 1.42
RPUSD3-209ENST00000451405 MYT1Q01538 1121 aa23.9■■□□□ 1.42
RPUSD3-209ENST00000451405 KRT27Q7Z3Y8 459 aa23.9■■□□□ 1.42
RPUSD3-209ENST00000451405 MARF1Q9Y4F3 1742 aaKnown RBP23.9■■□□□ 1.42
RPUSD3-209ENST00000451405 WASLO00401 505 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-209ENST00000451405 VPS72Q15906 364 aa23.89■■□□□ 1.41
RPUSD3-209ENST00000451405 CABLES1Q8TDN4 633 aa23.89■■□□□ 1.41
RPUSD3-209ENST00000451405 SLIT2O94813 1529 aa23.89■■□□□ 1.41
RPUSD3-209ENST00000451405 ANKARQ7Z5J8 1434 aa23.88■■□□□ 1.41
RPUSD3-209ENST00000451405 PSDA5PKW4 1024 aaPredicted RBP23.88■■□□□ 1.41
RPUSD3-209ENST00000451405 BAG6P46379 1132 aa23.87■■□□□ 1.41
RPUSD3-209ENST00000451405 LMOD2Q6P5Q4 547 aa23.87■■□□□ 1.41
RPUSD3-209ENST00000451405 GLI3P10071 1580 aa23.86■■□□□ 1.41
RPUSD3-209ENST00000451405 TNS3Q68CZ2 1445 aa23.86■■□□□ 1.41
RPUSD3-209ENST00000451405 NBPF1Q3BBV0 1214 aa23.86■■□□□ 1.41
RPUSD3-209ENST00000451405 SBNO1A3KN83 1393 aa23.86■■□□□ 1.41
RPUSD3-209ENST00000451405 ONECUT3O60422 494 aaPredicted RBP23.84■■□□□ 1.41
RPUSD3-209ENST00000451405 ARHGEF28Q8N1W1 1705 aaKnown RBP23.84■■□□□ 1.41
RPUSD3-209ENST00000451405 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.82■■□□□ 1.4
RPUSD3-209ENST00000451405 TULP4Q9NRJ4 1543 aa23.82■■□□□ 1.4
RPUSD3-209ENST00000451405 SIN3AQ96ST3 1273 aa23.81■■□□□ 1.4
RPUSD3-209ENST00000451405 EIF3AQ14152 1382 aaKnown RBP23.79■■□□□ 1.4
RPUSD3-209ENST00000451405 NUDT16Q96DE0 195 aaKnown RBP23.79■■□□□ 1.4
RPUSD3-209ENST00000451405 CDK19Q9BWU1 502 aa23.79■■□□□ 1.4
RPUSD3-209ENST00000451405 KIAA1210Q9ULL0 1709 aa23.79■■□□□ 1.4
RPUSD3-209ENST00000451405 L3MBTL2Q969R5 705 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms