RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 USP21Q9UK80 565 aa10.07□□□□□ -0.8
PMS1-217ENST00000450931 KNDC1Q76NI1 1749 aa10.07□□□□□ -0.8
PMS1-217ENST00000450931 KIF1AQ12756 1690 aa10.07□□□□□ -0.8
PMS1-217ENST00000450931 ROBO2Q9HCK4 1378 aa10.07□□□□□ -0.8
PMS1-217ENST00000450931 NPHP3Q7Z494 1330 aa10.05□□□□□ -0.8
PMS1-217ENST00000450931 DDX17Q92841 729 aaKnown RBP10.05□□□□□ -0.8
PMS1-217ENST00000450931 LRPPRCP42704 1394 aaKnown RBP10.05□□□□□ -0.8
PMS1-217ENST00000450931 TECPR2O15040 1411 aa10.05□□□□□ -0.8
PMS1-217ENST00000450931 ADAMTS2O95450 1211 aa10.05□□□□□ -0.8
PMS1-217ENST00000450931 ZRANB1Q9UGI0 708 aa10.04□□□□□ -0.8
PMS1-217ENST00000450931 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
PMS1-217ENST00000450931 FMN2Q9NZ56 1722 aa10.03□□□□□ -0.8
PMS1-217ENST00000450931 NAIPQ13075 1403 aa10.03□□□□□ -0.8
PMS1-217ENST00000450931 ORAI2Q96SN7 254 aa10.03□□□□□ -0.8
PMS1-217ENST00000450931 IFT172Q9UG01 1749 aa10.03□□□□□ -0.8
PMS1-217ENST00000450931 RRBP1Q9P2E9 1410 aaKnown RBP10.02□□□□□ -0.8
PMS1-217ENST00000450931 LRP5O75197 1615 aa10.02□□□□□ -0.81
PMS1-217ENST00000450931 SLIT2O94813 1529 aa10.01□□□□□ -0.81
PMS1-217ENST00000450931 USP32Q8NFA0 1604 aa10.01□□□□□ -0.81
PMS1-217ENST00000450931 NWD2Q9ULI1 1742 aa10.01□□□□□ -0.81
PMS1-217ENST00000450931 GLI3P10071 1580 aa10.01□□□□□ -0.81
PMS1-217ENST00000450931 BLMP54132 1417 aaPredicted RBP10.01□□□□□ -0.81
PMS1-217ENST00000450931 CCDC144AA2RUR9 1427 aa10□□□□□ -0.81
PMS1-217ENST00000450931 ITGAEP38570 1179 aa9.99□□□□□ -0.81
PMS1-217ENST00000450931 GJD4Q96KN9 370 aaPredicted RBP9.99□□□□□ -0.81
PMS1-217ENST00000450931 RALGAPBQ86X10 1494 aa9.99□□□□□ -0.81
PMS1-217ENST00000450931 ABCA3Q99758 1704 aa9.99□□□□□ -0.81
PMS1-217ENST00000450931 PLCH1Q4KWH8 1693 aa9.98□□□□□ -0.81
PMS1-217ENST00000450931 ABCC11Q96J66 1382 aa9.98□□□□□ -0.81
PMS1-217ENST00000450931 ANKRD30BQ9BXX2 1392 aa9.98□□□□□ -0.81
PMS1-217ENST00000450931 ESCO1Q5FWF5 840 aa9.97□□□□□ -0.81
PMS1-217ENST00000450931 BRWD3Q6RI45 1802 aa9.97□□□□□ -0.81
PMS1-217ENST00000450931 UNC5CLQ8IV45 518 aa9.97□□□□□ -0.81
PMS1-217ENST00000450931 SPATA31A3Q5VYP0 1347 aa9.97□□□□□ -0.81
PMS1-217ENST00000450931 PIK3C2GO75747 1445 aa9.96□□□□□ -0.82
PMS1-217ENST00000450931 SPATA31E1Q6ZUB1 1445 aa9.96□□□□□ -0.82
PMS1-217ENST00000450931 SIRT1Q96EB6 747 aa9.96□□□□□ -0.82
PMS1-217ENST00000450931 TNS3Q68CZ2 1445 aa9.95□□□□□ -0.82
PMS1-217ENST00000450931 SBNO1A3KN83 1393 aa9.94□□□□□ -0.82
PMS1-217ENST00000450931 NRAPQ86VF7 1730 aa9.94□□□□□ -0.82
PMS1-217ENST00000450931 FOXO3O43524 673 aa9.94□□□□□ -0.82
PMS1-217ENST00000450931 VPS72Q15906 364 aa9.94□□□□□ -0.82
PMS1-217ENST00000450931 ADGRB2O60241 1585 aa9.94□□□□□ -0.82
PMS1-217ENST00000450931 NRXN1Q9ULB1 1477 aa9.94□□□□□ -0.82
PMS1-217ENST00000450931 RGPD1P0DJD0 1748 aa9.93□□□□□ -0.82
PMS1-217ENST00000450931 YTHDC2Q9H6S0 1430 aaKnown RBP9.93□□□□□ -0.82
PMS1-217ENST00000450931 SLC4A1APQ9BWU0 796 aaKnown RBP9.93□□□□□ -0.82
PMS1-217ENST00000450931 ARHGEF10O15013 1369 aa9.93□□□□□ -0.82
PMS1-217ENST00000450931 ONECUT3O60422 494 aaPredicted RBP9.93□□□□□ -0.82
PMS1-217ENST00000450931 DLC1Q96QB1 1528 aa9.93□□□□□ -0.82
PMS1-217ENST00000450931 SF3B2Q13435 895 aaKnown RBP9.92□□□□□ -0.82
PMS1-217ENST00000450931 ANKARQ7Z5J8 1434 aa9.92□□□□□ -0.82
PMS1-217ENST00000450931 PSME1Q06323 249 aa9.92□□□□□ -0.82
PMS1-217ENST00000450931 ACIN1Q9UKV3 1341 aaKnown RBP9.92□□□□□ -0.82
PMS1-217ENST00000450931 ADGRF5Q8IZF2 1346 aa9.91□□□□□ -0.82
PMS1-217ENST00000450931 COL14A1Q05707 1796 aaKnown RBP9.91□□□□□ -0.82
PMS1-217ENST00000450931 TRPM3Q9HCF6 1732 aaPredicted RBP9.91□□□□□ -0.82
PMS1-217ENST00000450931 KRT28Q7Z3Y7 464 aa9.91□□□□□ -0.82
PMS1-217ENST00000450931 PLEKHH1Q9ULM0 1364 aa9.91□□□□□ -0.82
PMS1-217ENST00000450931 RGPD8O14715 1765 aaPredicted RBP9.9□□□□□ -0.82
PMS1-217ENST00000450931 XPCQ01831 940 aaPredicted RBP9.9□□□□□ -0.82
PMS1-217ENST00000450931 SEPT12Q8IYM1 358 aa9.9□□□□□ -0.82
PMS1-217ENST00000450931 ALS2Q96Q42 1657 aa9.9□□□□□ -0.82
PMS1-217ENST00000450931 DISP2A7MBM2 1401 aa9.89□□□□□ -0.83
PMS1-217ENST00000450931 WAPLQ7Z5K2 1190 aa9.89□□□□□ -0.83
PMS1-217ENST00000450931 CRYBG1Q9Y4K1 1723 aa9.89□□□□□ -0.83
PMS1-217ENST00000450931 EIF3AQ14152 1382 aaKnown RBP9.89□□□□□ -0.83
PMS1-217ENST00000450931 PHF8Q9UPP1 1060 aa9.89□□□□□ -0.83
PMS1-217ENST00000450931 KRT27Q7Z3Y8 459 aa9.88□□□□□ -0.83
PMS1-217ENST00000450931 THSD7AQ9UPZ6 1657 aa9.88□□□□□ -0.83
PMS1-217ENST00000450931 DHX57Q6P158 1386 aaKnown RBP9.88□□□□□ -0.83
PMS1-217ENST00000450931 TNS1Q9HBL0 1735 aaKnown RBP9.88□□□□□ -0.83
PMS1-217ENST00000450931 BAG6P46379 1132 aa9.88□□□□□ -0.83
PMS1-217ENST00000450931 HAP1P54257 671 aaPredicted RBP9.88□□□□□ -0.83
PMS1-217ENST00000450931 STK26Q9P289 416 aa9.88□□□□□ -0.83
PMS1-217ENST00000450931 DEFB132Q7Z7B7 95 aa9.87□□□□□ -0.83
PMS1-217ENST00000450931 C14orf93Q9H972 538 aaKnown RBP9.87□□□□□ -0.83
PMS1-217ENST00000450931 NUTM2FA1L443 756 aa9.86□□□□□ -0.83
PMS1-217ENST00000450931 TULP4Q9NRJ4 1543 aa9.86□□□□□ -0.83
PMS1-217ENST00000450931 ITSN1Q15811 1721 aa9.85□□□□□ -0.83
PMS1-217ENST00000450931 TMEM132EQ6IEE7 984 aa9.85□□□□□ -0.83
PMS1-217ENST00000450931 ADGRB1O14514 1584 aa9.84□□□□□ -0.83
PMS1-217ENST00000450931 PARD3Q8TEW0 1356 aa9.83□□□□□ -0.84
PMS1-217ENST00000450931 CCDC9Q9Y3X0 531 aaKnown RBP9.83□□□□□ -0.84
PMS1-217ENST00000450931 RGL3Q3MIN7 710 aa9.83□□□□□ -0.84
PMS1-217ENST00000450931 MPHOSPH9Q99550 1183 aa9.83□□□□□ -0.84
PMS1-217ENST00000450931 RREB1Q92766 1687 aa9.83□□□□□ -0.84
PMS1-217ENST00000450931 PHRF1Q9P1Y6 1649 aaKnown RBP9.83□□□□□ -0.84
PMS1-217ENST00000450931 GPRASP1Q5JY77 1395 aa9.83□□□□□ -0.84
PMS1-217ENST00000450931 HRCP23327 699 aa9.83□□□□□ -0.84
PMS1-217ENST00000450931 EP400Q96L91 3159 aa9.82□□□□□ -0.84
PMS1-217ENST00000450931 FAM83GA6ND36 823 aa9.82□□□□□ -0.84
PMS1-217ENST00000450931 ATP7BP35670 1465 aa9.82□□□□□ -0.84
PMS1-217ENST00000450931 PPARGC1BQ86YN6 1023 aaKnown RBP9.82□□□□□ -0.84
PMS1-217ENST00000450931 CABLES1Q8TDN4 633 aa9.82□□□□□ -0.84
PMS1-217ENST00000450931 SPATA31A5Q5VU36 1347 aa9.82□□□□□ -0.84
PMS1-217ENST00000450931 SPATA31A7Q8IWB4 1347 aa9.82□□□□□ -0.84
PMS1-217ENST00000450931 PRAM1Q96QH2 718 aa9.81□□□□□ -0.84
PMS1-217ENST00000450931 BTG4Q9NY30 223 aa9.8□□□□□ -0.84
PMS1-217ENST00000450931 FAM98CQ17RN3 349 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms