RNA–Protein interactions for RNA: ENST00000450454.6

TCEA3-203, Transcript of transcription elongation factor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA3, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-203ENST00000450454 LRP6O75581 1613 aa16.99■□□□□ 0.31
TCEA3-203ENST00000450454 MYOM2P54296 1465 aa16.99■□□□□ 0.31
TCEA3-203ENST00000450454 DDX17Q92841 729 aaKnown RBP16.98■□□□□ 0.31
TCEA3-203ENST00000450454 NRXN1Q9ULB1 1477 aa16.98■□□□□ 0.31
TCEA3-203ENST00000450454 ORAI2Q96SN7 254 aa16.98■□□□□ 0.31
TCEA3-203ENST00000450454 C14orf93Q9H972 538 aaKnown RBP16.98■□□□□ 0.31
TCEA3-203ENST00000450454 CDC42BPGQ6DT37 1551 aa16.97■□□□□ 0.31
TCEA3-203ENST00000450454 YTHDC2Q9H6S0 1430 aaKnown RBP16.97■□□□□ 0.31
TCEA3-203ENST00000450454 WAPLQ7Z5K2 1190 aa16.97■□□□□ 0.31
TCEA3-203ENST00000450454 NUTM2BA6NNL0 878 aaPredicted RBP16.96■□□□□ 0.31
TCEA3-203ENST00000450454 NUTM2EB1AL46 878 aaPredicted RBP16.96■□□□□ 0.31
TCEA3-203ENST00000450454 NUTM2AQ8IVF1 878 aaPredicted RBP16.96■□□□□ 0.31
TCEA3-203ENST00000450454 KNDC1Q76NI1 1749 aa16.96■□□□□ 0.31
TCEA3-203ENST00000450454 LAMC1P11047 1609 aa16.95■□□□□ 0.3
TCEA3-203ENST00000450454 CFAP70Q5T0N1 1121 aa16.94■□□□□ 0.3
TCEA3-203ENST00000450454 ZNF772Q68DY9 489 aaPredicted RBP16.94■□□□□ 0.3
TCEA3-203ENST00000450454 SIRT1Q96EB6 747 aa16.94■□□□□ 0.3
TCEA3-203ENST00000450454 PNPLA6Q8IY17 1366 aa16.93■□□□□ 0.3
TCEA3-203ENST00000450454 SOS2Q07890 1332 aaPredicted RBP16.93■□□□□ 0.3
TCEA3-203ENST00000450454 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
TCEA3-203ENST00000450454 PLEKHH1Q9ULM0 1364 aa16.93■□□□□ 0.3
TCEA3-203ENST00000450454 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
TCEA3-203ENST00000450454 DCAF11Q8TEB1 546 aa16.9■□□□□ 0.3
TCEA3-203ENST00000450454 STAC3Q96MF2 364 aa16.9■□□□□ 0.3
TCEA3-203ENST00000450454 KDM2AQ9Y2K7 1162 aa16.89■□□□□ 0.3
TCEA3-203ENST00000450454 NUTM2FA1L443 756 aa16.89■□□□□ 0.29
TCEA3-203ENST00000450454 PRAM1Q96QH2 718 aa16.87■□□□□ 0.29
TCEA3-203ENST00000450454 AFF2P51816 1311 aa16.86■□□□□ 0.29
TCEA3-203ENST00000450454 FOXO3O43524 673 aa16.86■□□□□ 0.29
TCEA3-203ENST00000450454 POGKQ9P215 609 aa16.86■□□□□ 0.29
TCEA3-203ENST00000450454 DLC1Q96QB1 1528 aa16.86■□□□□ 0.29
TCEA3-203ENST00000450454 FMN2Q9NZ56 1722 aa16.86■□□□□ 0.29
TCEA3-203ENST00000450454 C8orf37Q96NL8 207 aa16.85■□□□□ 0.29
TCEA3-203ENST00000450454 ADGRB1O14514 1584 aa16.85■□□□□ 0.29
TCEA3-203ENST00000450454 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
TCEA3-203ENST00000450454 PXDNQ92626 1479 aa16.84■□□□□ 0.29
TCEA3-203ENST00000450454 ADAMTS2O95450 1211 aa16.84■□□□□ 0.29
TCEA3-203ENST00000450454 RXRBP28702 533 aa16.84■□□□□ 0.29
TCEA3-203ENST00000450454 XPCQ01831 940 aaPredicted RBP16.83■□□□□ 0.28
TCEA3-203ENST00000450454 TRAK1Q9UPV9 953 aa16.83■□□□□ 0.28
TCEA3-203ENST00000450454 NGLY1Q96IV0 654 aa16.82■□□□□ 0.28
TCEA3-203ENST00000450454 KIF1AQ12756 1690 aa16.82■□□□□ 0.28
TCEA3-203ENST00000450454 COL22A1Q8NFW1 1626 aaPredicted RBP16.81■□□□□ 0.28
TCEA3-203ENST00000450454 PHF8Q9UPP1 1060 aa16.8■□□□□ 0.28
TCEA3-203ENST00000450454 QTRT2Q9H974 415 aaKnown RBP16.79■□□□□ 0.28
TCEA3-203ENST00000450454 KRT28Q7Z3Y7 464 aa16.78■□□□□ 0.28
TCEA3-203ENST00000450454 ADGRB2O60241 1585 aa16.78■□□□□ 0.28
TCEA3-203ENST00000450454 ANKARQ7Z5J8 1434 aa16.78■□□□□ 0.28
TCEA3-203ENST00000450454 PSME1Q06323 249 aa16.77■□□□□ 0.28
TCEA3-203ENST00000450454 CDK12Q9NYV4 1490 aaPredicted RBP16.77■□□□□ 0.28
TCEA3-203ENST00000450454 SPATA31A3Q5VYP0 1347 aa16.77■□□□□ 0.28
TCEA3-203ENST00000450454 RBM6P78332 1123 aaKnown RBP16.77■□□□□ 0.27
TCEA3-203ENST00000450454 HIRIP3Q9BW71 556 aaPredicted RBP16.77■□□□□ 0.27
TCEA3-203ENST00000450454 MINK1Q8N4C8 1332 aaPredicted RBP16.76■□□□□ 0.27
TCEA3-203ENST00000450454 EIF3AQ14152 1382 aaKnown RBP16.76■□□□□ 0.27
TCEA3-203ENST00000450454 USP21Q9UK80 565 aa16.76■□□□□ 0.27
TCEA3-203ENST00000450454 FNBP4Q8N3X1 1017 aaPredicted RBP16.75■□□□□ 0.27
TCEA3-203ENST00000450454 RGPD8O14715 1765 aaPredicted RBP16.75■□□□□ 0.27
TCEA3-203ENST00000450454 WASLO00401 505 aaPredicted RBP16.73■□□□□ 0.27
TCEA3-203ENST00000450454 TNS3Q68CZ2 1445 aa16.73■□□□□ 0.27
TCEA3-203ENST00000450454 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
TCEA3-203ENST00000450454 TRPC5Q9UL62 973 aaPredicted RBP16.72■□□□□ 0.27
TCEA3-203ENST00000450454 USP32Q8NFA0 1604 aa16.72■□□□□ 0.27
TCEA3-203ENST00000450454 SBNO1A3KN83 1393 aa16.72■□□□□ 0.27
TCEA3-203ENST00000450454 TULP4Q9NRJ4 1543 aa16.71■□□□□ 0.27
TCEA3-203ENST00000450454 ARHGEF28Q8N1W1 1705 aaKnown RBP16.71■□□□□ 0.26
TCEA3-203ENST00000450454 KIAA1210Q9ULL0 1709 aa16.71■□□□□ 0.26
TCEA3-203ENST00000450454 RGS12O14924 1447 aa16.7■□□□□ 0.26
TCEA3-203ENST00000450454 HAP1P54257 671 aaPredicted RBP16.7■□□□□ 0.26
TCEA3-203ENST00000450454 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
TCEA3-203ENST00000450454 SIN3AQ96ST3 1273 aa16.7■□□□□ 0.26
TCEA3-203ENST00000450454 TIMELESSQ9UNS1 1208 aa16.7■□□□□ 0.26
TCEA3-203ENST00000450454 ARHGEF10O15013 1369 aa16.69■□□□□ 0.26
TCEA3-203ENST00000450454 PRR36Q9H6K5 1346 aa16.69■□□□□ 0.26
TCEA3-203ENST00000450454 ATRNO75882 1429 aa16.69■□□□□ 0.26
TCEA3-203ENST00000450454 MARF1Q9Y4F3 1742 aaKnown RBP16.69■□□□□ 0.26
TCEA3-203ENST00000450454 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
TCEA3-203ENST00000450454 UPF1Q92900 1129 aaKnown RBP eCLIP16.68■□□□□ 0.26
TCEA3-203ENST00000450454 BCL9LQ86UU0 1499 aa16.68■□□□□ 0.26
TCEA3-203ENST00000450454 NBPF1Q3BBV0 1214 aa16.67■□□□□ 0.26
TCEA3-203ENST00000450454 NGDNQ8NEJ9 315 aaKnown RBP16.66■□□□□ 0.26
TCEA3-203ENST00000450454 CABLES1Q8TDN4 633 aa16.66■□□□□ 0.26
TCEA3-203ENST00000450454 PLEKHG5O94827 1062 aa16.65■□□□□ 0.26
TCEA3-203ENST00000450454 L3MBTL2Q969R5 705 aa16.65■□□□□ 0.26
TCEA3-203ENST00000450454 NUDT16Q96DE0 195 aaKnown RBP16.65■□□□□ 0.26
TCEA3-203ENST00000450454 NEUROD1Q13562 356 aa16.64■□□□□ 0.25
TCEA3-203ENST00000450454 UNC5CLQ8IV45 518 aa16.64■□□□□ 0.25
TCEA3-203ENST00000450454 CDK19Q9BWU1 502 aa16.64■□□□□ 0.25
TCEA3-203ENST00000450454 SLIT2O94813 1529 aa16.64■□□□□ 0.25
TCEA3-203ENST00000450454 ATP7BP35670 1465 aa16.64■□□□□ 0.25
TCEA3-203ENST00000450454 GJD4Q96KN9 370 aaPredicted RBP16.63■□□□□ 0.25
TCEA3-203ENST00000450454 ITSN1Q15811 1721 aa16.62■□□□□ 0.25
TCEA3-203ENST00000450454 TRPM3Q9HCF6 1732 aaPredicted RBP16.62■□□□□ 0.25
TCEA3-203ENST00000450454 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.62■□□□□ 0.25
TCEA3-203ENST00000450454 CENPJQ9HC77 1338 aaPredicted RBP16.62■□□□□ 0.25
TCEA3-203ENST00000450454 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
TCEA3-203ENST00000450454 TONSLQ96HA7 1378 aa16.6■□□□□ 0.25
TCEA3-203ENST00000450454 ABCA3Q99758 1704 aa16.6■□□□□ 0.25
TCEA3-203ENST00000450454 ATAD2Q6PL18 1390 aa16.6■□□□□ 0.25
TCEA3-203ENST00000450454 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms