RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 KIF1BO60333 1816 aa26.02■■□□□ 1.76
FAM3A-216ENST00000449971 FNBP4Q8N3X1 1017 aaPredicted RBP26.01■■□□□ 1.75
FAM3A-216ENST00000449971 ZRANB1Q9UGI0 708 aa26.01■■□□□ 1.75
FAM3A-216ENST00000449971 EP400Q96L91 3159 aa26■■□□□ 1.75
FAM3A-216ENST00000449971 ACIN1Q9UKV3 1341 aaKnown RBP26■■□□□ 1.75
FAM3A-216ENST00000449971 NUTM2FA1L443 756 aa25.99■■□□□ 1.75
FAM3A-216ENST00000449971 ATRNO75882 1429 aa25.98■■□□□ 1.75
FAM3A-216ENST00000449971 LAMC1P11047 1609 aa25.96■■□□□ 1.75
FAM3A-216ENST00000449971 NPHP3Q7Z494 1330 aa25.95■■□□□ 1.75
FAM3A-216ENST00000449971 FOXO3O43524 673 aa25.95■■□□□ 1.74
FAM3A-216ENST00000449971 RAB3GAP2Q9H2M9 1393 aa25.95■■□□□ 1.74
FAM3A-216ENST00000449971 STK26Q9P289 416 aa25.94■■□□□ 1.74
FAM3A-216ENST00000449971 MYOM2P54296 1465 aa25.91■■□□□ 1.74
FAM3A-216ENST00000449971 PLEKHG5O94827 1062 aa25.9■■□□□ 1.74
FAM3A-216ENST00000449971 GJD4Q96KN9 370 aaPredicted RBP25.9■■□□□ 1.74
FAM3A-216ENST00000449971 BCL9LQ86UU0 1499 aa25.9■■□□□ 1.74
FAM3A-216ENST00000449971 RPGRIP1LQ68CZ1 1315 aa25.89■■□□□ 1.74
FAM3A-216ENST00000449971 CCDC144AA2RUR9 1427 aa25.89■■□□□ 1.74
FAM3A-216ENST00000449971 COL22A1Q8NFW1 1626 aaPredicted RBP25.89■■□□□ 1.74
FAM3A-216ENST00000449971 WAPLQ7Z5K2 1190 aa25.88■■□□□ 1.73
FAM3A-216ENST00000449971 RGL3Q3MIN7 710 aa25.87■■□□□ 1.73
FAM3A-216ENST00000449971 PXDNQ92626 1479 aa25.86■■□□□ 1.73
FAM3A-216ENST00000449971 CCDC125Q86Z20 511 aa25.85■■□□□ 1.73
FAM3A-216ENST00000449971 PRAG1Q86YV5 1406 aa25.84■■□□□ 1.73
FAM3A-216ENST00000449971 CDC42BPGQ6DT37 1551 aa25.83■■□□□ 1.73
FAM3A-216ENST00000449971 ADGRF5Q8IZF2 1346 aa25.83■■□□□ 1.73
FAM3A-216ENST00000449971 LRPPRCP42704 1394 aaKnown RBP25.82■■□□□ 1.72
FAM3A-216ENST00000449971 PPLO60437 1756 aa25.82■■□□□ 1.72
FAM3A-216ENST00000449971 HAP1P54257 671 aaPredicted RBP25.81■■□□□ 1.72
FAM3A-216ENST00000449971 UNC5CLQ8IV45 518 aa25.81■■□□□ 1.72
FAM3A-216ENST00000449971 HRCP23327 699 aa25.8■■□□□ 1.72
FAM3A-216ENST00000449971 TMEM132EQ6IEE7 984 aa25.8■■□□□ 1.72
FAM3A-216ENST00000449971 MARF1Q9Y4F3 1742 aaKnown RBP25.8■■□□□ 1.72
FAM3A-216ENST00000449971 DEFB132Q7Z7B7 95 aa25.79■■□□□ 1.72
FAM3A-216ENST00000449971 PLEKHH1Q9ULM0 1364 aa25.79■■□□□ 1.72
FAM3A-216ENST00000449971 RALGAPBQ86X10 1494 aa25.79■■□□□ 1.72
FAM3A-216ENST00000449971 CCDC9Q9Y3X0 531 aaKnown RBP25.78■■□□□ 1.72
FAM3A-216ENST00000449971 SF3B2Q13435 895 aaKnown RBP25.76■■□□□ 1.71
FAM3A-216ENST00000449971 SPATA31E1Q6ZUB1 1445 aa25.76■■□□□ 1.71
FAM3A-216ENST00000449971 SPATA31A3Q5VYP0 1347 aa25.75■■□□□ 1.71
FAM3A-216ENST00000449971 KRT28Q7Z3Y7 464 aa25.75■■□□□ 1.71
FAM3A-216ENST00000449971 BLMP54132 1417 aaPredicted RBP25.74■■□□□ 1.71
FAM3A-216ENST00000449971 LMOD2Q6P5Q4 547 aa25.74■■□□□ 1.71
FAM3A-216ENST00000449971 CABLES1Q8TDN4 633 aa25.74■■□□□ 1.71
FAM3A-216ENST00000449971 GLI3P10071 1580 aa25.73■■□□□ 1.71
FAM3A-216ENST00000449971 SEPT12Q8IYM1 358 aa25.73■■□□□ 1.71
FAM3A-216ENST00000449971 ANKRD30BQ9BXX2 1392 aa25.72■■□□□ 1.71
FAM3A-216ENST00000449971 SLIT2O94813 1529 aa25.72■■□□□ 1.71
FAM3A-216ENST00000449971 A0A0G2JS52 829 aa25.71■■□□□ 1.71
FAM3A-216ENST00000449971 MYT1Q01538 1121 aa25.71■■□□□ 1.71
FAM3A-216ENST00000449971 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.69■■□□□ 1.7
FAM3A-216ENST00000449971 TECPR2O15040 1411 aa25.68■■□□□ 1.7
FAM3A-216ENST00000449971 ABCC11Q96J66 1382 aa25.68■■□□□ 1.7
FAM3A-216ENST00000449971 BRWD3Q6RI45 1802 aa25.67■■□□□ 1.7
FAM3A-216ENST00000449971 USP32Q8NFA0 1604 aa25.67■■□□□ 1.7
FAM3A-216ENST00000449971 SAFB2Q14151 953 aaKnown RBP eCLIP25.67■■□□□ 1.7
FAM3A-216ENST00000449971 PHF8Q9UPP1 1060 aa25.66■■□□□ 1.7
FAM3A-216ENST00000449971 FMN2Q9NZ56 1722 aa25.66■■□□□ 1.7
FAM3A-216ENST00000449971 VPS72Q15906 364 aa25.65■■□□□ 1.7
FAM3A-216ENST00000449971 YTHDC2Q9H6S0 1430 aaKnown RBP25.64■■□□□ 1.7
FAM3A-216ENST00000449971 PSME1Q06323 249 aa25.64■■□□□ 1.7
FAM3A-216ENST00000449971 KIF1AQ12756 1690 aa25.64■■□□□ 1.69
FAM3A-216ENST00000449971 TNS3Q68CZ2 1445 aa25.63■■□□□ 1.69
FAM3A-216ENST00000449971 PSDA5PKW4 1024 aaPredicted RBP25.63■■□□□ 1.69
FAM3A-216ENST00000449971 KRT27Q7Z3Y8 459 aa25.63■■□□□ 1.69
FAM3A-216ENST00000449971 KNDC1Q76NI1 1749 aa25.6■■□□□ 1.69
FAM3A-216ENST00000449971 PMFBP1Q8TBY8 1022 aa25.6■■□□□ 1.69
FAM3A-216ENST00000449971 PIK3C2GO75747 1445 aa25.6■■□□□ 1.69
FAM3A-216ENST00000449971 RGPD8O14715 1765 aaPredicted RBP25.59■■□□□ 1.69
FAM3A-216ENST00000449971 FAM83GA6ND36 823 aa25.57■■□□□ 1.68
FAM3A-216ENST00000449971 FAM98CQ17RN3 349 aaKnown RBP25.57■■□□□ 1.68
FAM3A-216ENST00000449971 PLCH1Q4KWH8 1693 aa25.57■■□□□ 1.68
FAM3A-216ENST00000449971 CFAP70Q5T0N1 1121 aa25.56■■□□□ 1.68
FAM3A-216ENST00000449971 PRAM1Q96QH2 718 aa25.56■■□□□ 1.68
FAM3A-216ENST00000449971 C14orf93Q9H972 538 aaKnown RBP25.56■■□□□ 1.68
FAM3A-216ENST00000449971 KDM2AQ9Y2K7 1162 aa25.56■■□□□ 1.68
FAM3A-216ENST00000449971 IFT172Q9UG01 1749 aa25.56■■□□□ 1.68
FAM3A-216ENST00000449971 BAG6P46379 1132 aa25.55■■□□□ 1.68
FAM3A-216ENST00000449971 DCAF11Q8TEB1 546 aa25.54■■□□□ 1.68
FAM3A-216ENST00000449971 SBNO1A3KN83 1393 aa25.54■■□□□ 1.68
FAM3A-216ENST00000449971 ARHGEF10O15013 1369 aa25.54■■□□□ 1.68
FAM3A-216ENST00000449971 FAM182BQ5T319 152 aa25.53■■□□□ 1.68
FAM3A-216ENST00000449971 POGKQ9P215 609 aa25.53■■□□□ 1.68
FAM3A-216ENST00000449971 DHX57Q6P158 1386 aaKnown RBP25.53■■□□□ 1.68
FAM3A-216ENST00000449971 ONECUT3O60422 494 aaPredicted RBP25.52■■□□□ 1.68
FAM3A-216ENST00000449971 BTG4Q9NY30 223 aa25.52■■□□□ 1.68
FAM3A-216ENST00000449971 NRXN1Q9ULB1 1477 aa25.52■■□□□ 1.68
FAM3A-216ENST00000449971 SIRT1Q96EB6 747 aa25.51■■□□□ 1.67
FAM3A-216ENST00000449971 NWD2Q9ULI1 1742 aa25.51■■□□□ 1.67
FAM3A-216ENST00000449971 EN1Q05925 392 aaPredicted RBP25.5■■□□□ 1.67
FAM3A-216ENST00000449971 HIRIP3Q9BW71 556 aaPredicted RBP25.49■■□□□ 1.67
FAM3A-216ENST00000449971 ABCA3Q99758 1704 aa25.49■■□□□ 1.67
FAM3A-216ENST00000449971 LRP5O75197 1615 aa25.46■■□□□ 1.67
FAM3A-216ENST00000449971 STAC3Q96MF2 364 aa25.46■■□□□ 1.67
FAM3A-216ENST00000449971 R3HDM1Q15032 1099 aaKnown RBP25.44■■□□□ 1.66
FAM3A-216ENST00000449971 MINK1Q8N4C8 1332 aaPredicted RBP25.43■■□□□ 1.66
FAM3A-216ENST00000449971 PAK3O75914 559 aaPredicted RBP25.43■■□□□ 1.66
FAM3A-216ENST00000449971 TRAK1Q9UPV9 953 aa25.43■■□□□ 1.66
FAM3A-216ENST00000449971 GPRASP1Q5JY77 1395 aa25.43■■□□□ 1.66
FAM3A-216ENST00000449971 NRAPQ86VF7 1730 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms