RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 ARAP3Q8WWN8 1544 aa14.54□□□□□ -0.08
SYVN1-204ENST00000449943 FRAT2O75474 233 aaPredicted RBP14.54□□□□□ -0.08
SYVN1-204ENST00000449943 NGEFQ8N5V2 710 aa14.53□□□□□ -0.08
SYVN1-204ENST00000449943 SEC24BO95487 1268 aa14.53□□□□□ -0.08
SYVN1-204ENST00000449943 CFAP53Q96M91 514 aa14.53□□□□□ -0.08
SYVN1-204ENST00000449943 KIAA1210Q9ULL0 1709 aa14.53□□□□□ -0.08
SYVN1-204ENST00000449943 U2AF1L5P0DN76 240 aaPredicted RBP14.53□□□□□ -0.08
SYVN1-204ENST00000449943 RARSP54136 660 aaKnown RBP14.53□□□□□ -0.08
SYVN1-204ENST00000449943 U2AF1Q01081 240 aaKnown RBP eCLIP14.53□□□□□ -0.08
SYVN1-204ENST00000449943 MROH1Q8NDA8 1641 aa14.52□□□□□ -0.08
SYVN1-204ENST00000449943 MROH2AA6NES4 1674 aa14.52□□□□□ -0.08
SYVN1-204ENST00000449943 RLBP1P12271 317 aa14.52□□□□□ -0.09
SYVN1-204ENST00000449943 EFCAB6Q5THR3 1501 aa14.52□□□□□ -0.09
SYVN1-204ENST00000449943 KIF1BO60333 1816 aa14.52□□□□□ -0.09
SYVN1-204ENST00000449943 BRPF3Q9ULD4 1205 aa14.51□□□□□ -0.09
SYVN1-204ENST00000449943 ABCA9Q8IUA7 1624 aa14.51□□□□□ -0.09
SYVN1-204ENST00000449943 C14orf93Q9H972 538 aaKnown RBP14.51□□□□□ -0.09
SYVN1-204ENST00000449943 ASXL2Q76L83 1435 aa14.51□□□□□ -0.09
SYVN1-204ENST00000449943 PPRC1Q5VV67 1664 aaKnown RBP14.5□□□□□ -0.09
SYVN1-204ENST00000449943 CABP2Q9NPB3 220 aa14.5□□□□□ -0.09
SYVN1-204ENST00000449943 MAPK8IP3Q9UPT6 1336 aa14.5□□□□□ -0.09
SYVN1-204ENST00000449943 CFAP65Q6ZU64 1925 aaKnown RBP14.5□□□□□ -0.09
SYVN1-204ENST00000449943 PCDHB15Q9Y5E8 787 aa14.5□□□□□ -0.09
SYVN1-204ENST00000449943 SLKQ9H2G2 1235 aaPredicted RBP14.49□□□□□ -0.09
SYVN1-204ENST00000449943 STK26Q9P289 416 aa14.49□□□□□ -0.09
SYVN1-204ENST00000449943 U2SURPO15042 1029 aaKnown RBP14.49□□□□□ -0.09
SYVN1-204ENST00000449943 SBNO2Q9Y2G9 1366 aa14.49□□□□□ -0.09
SYVN1-204ENST00000449943 NINLQ9Y2I6 1382 aa14.48□□□□□ -0.09
SYVN1-204ENST00000449943 PMFBP1Q8TBY8 1022 aa14.48□□□□□ -0.09
SYVN1-204ENST00000449943 TSR2Q969E8 191 aaKnown RBP14.47□□□□□ -0.09
SYVN1-204ENST00000449943 NPATQ14207 1427 aa14.47□□□□□ -0.09
SYVN1-204ENST00000449943 USP19O94966 1318 aa14.47□□□□□ -0.09
SYVN1-204ENST00000449943 FTSJ3Q8IY81 847 aaKnown RBP14.47□□□□□ -0.09
SYVN1-204ENST00000449943 PDZRN3Q9UPQ7 1066 aa14.47□□□□□ -0.09
SYVN1-204ENST00000449943 WDR63Q8IWG1 891 aa14.46□□□□□ -0.09
SYVN1-204ENST00000449943 EVC2Q86UK5 1308 aa14.46□□□□□ -0.09
SYVN1-204ENST00000449943 MYH16Q9H6N6 1097 aa14.46□□□□□ -0.09
SYVN1-204ENST00000449943 NRXN1Q9ULB1 1477 aa14.46□□□□□ -0.09
SYVN1-204ENST00000449943 ADGRB3O60242 1522 aa14.46□□□□□ -0.1
SYVN1-204ENST00000449943 SRPK2P78362 688 aaKnown RBP14.45□□□□□ -0.1
SYVN1-204ENST00000449943 UPF2Q9HAU5 1272 aaKnown RBP14.45□□□□□ -0.1
SYVN1-204ENST00000449943 BECN1Q14457 450 aa14.45□□□□□ -0.1
SYVN1-204ENST00000449943 NEURL4Q96JN8 1562 aa14.45□□□□□ -0.1
SYVN1-204ENST00000449943 GGNBP2Q9H3C7 697 aa14.45□□□□□ -0.1
SYVN1-204ENST00000449943 ZNF518AQ6AHZ1 1483 aa14.45□□□□□ -0.1
SYVN1-204ENST00000449943 KIDINS220Q9ULH0 1771 aa14.44□□□□□ -0.1
SYVN1-204ENST00000449943 POGKQ9P215 609 aa14.44□□□□□ -0.1
SYVN1-204ENST00000449943 RWDD1Q9H446 243 aaPredicted RBP14.44□□□□□ -0.1
SYVN1-204ENST00000449943 QRICH2Q9H0J4 1663 aa14.44□□□□□ -0.1
SYVN1-204ENST00000449943 IFT172Q9UG01 1749 aa14.43□□□□□ -0.1
SYVN1-204ENST00000449943 SPRYD3Q8NCJ5 442 aa14.43□□□□□ -0.1
SYVN1-204ENST00000449943 SMC4Q9NTJ3 1288 aa14.43□□□□□ -0.1
SYVN1-204ENST00000449943 SHPRHQ149N8 1683 aa14.43□□□□□ -0.1
SYVN1-204ENST00000449943 MYO3AQ8NEV4 1616 aa14.43□□□□□ -0.1
SYVN1-204ENST00000449943 IQSEC2Q5JU85 1478 aa14.42□□□□□ -0.1
SYVN1-204ENST00000449943 RAPGEF3O95398 923 aa14.42□□□□□ -0.1
SYVN1-204ENST00000449943 HDGFP51858 240 aaKnown RBP14.42□□□□□ -0.1
SYVN1-204ENST00000449943 ZKSCAN2Q63HK3 967 aa14.42□□□□□ -0.1
SYVN1-204ENST00000449943 PHF23Q9BUL5 403 aaPredicted RBP14.42□□□□□ -0.1
SYVN1-204ENST00000449943 EXOSC9Q06265 439 aaKnown RBP14.41□□□□□ -0.1
SYVN1-204ENST00000449943 SETBP1Q9Y6X0 1596 aa14.41□□□□□ -0.1
SYVN1-204ENST00000449943 VGFO15240 615 aaPredicted RBP14.41□□□□□ -0.1
SYVN1-204ENST00000449943 MVPQ14764 893 aaKnown RBP14.41□□□□□ -0.1
SYVN1-204ENST00000449943 DZIP1LQ8IYY4 767 aaKnown RBP14.41□□□□□ -0.1
SYVN1-204ENST00000449943 MLECQ14165 292 aa14.41□□□□□ -0.1
SYVN1-204ENST00000449943 ITPRIPQ8IWB1 547 aa14.41□□□□□ -0.1
SYVN1-204ENST00000449943 ADGRB1O14514 1584 aa14.41□□□□□ -0.1
SYVN1-204ENST00000449943 MINK1Q8N4C8 1332 aaPredicted RBP14.4□□□□□ -0.1
SYVN1-204ENST00000449943 ANKRD36BQ8N2N9 1353 aa14.4□□□□□ -0.1
SYVN1-204ENST00000449943 RPGRIP1LQ68CZ1 1315 aa14.4□□□□□ -0.1
SYVN1-204ENST00000449943 LMTK2Q8IWU2 1503 aa14.4□□□□□ -0.1
SYVN1-204ENST00000449943 CCDC27Q2M243 656 aa14.4□□□□□ -0.1
SYVN1-204ENST00000449943 ANO8Q9HCE9 1232 aaPredicted RBP14.4□□□□□ -0.1
SYVN1-204ENST00000449943 CD109Q6YHK3 1445 aa14.4□□□□□ -0.1
SYVN1-204ENST00000449943 ARXQ96QS3 562 aa14.38□□□□□ -0.11
SYVN1-204ENST00000449943 POGZQ7Z3K3 1410 aa14.38□□□□□ -0.11
SYVN1-204ENST00000449943 MFAP1P55081 439 aaKnown RBP14.37□□□□□ -0.11
SYVN1-204ENST00000449943 A0A1W2PP64 1363 aa14.37□□□□□ -0.11
SYVN1-204ENST00000449943 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
SYVN1-204ENST00000449943 CYB5RLQ6IPT4 315 aa14.37□□□□□ -0.11
SYVN1-204ENST00000449943 TULP4Q9NRJ4 1543 aa14.37□□□□□ -0.11
SYVN1-204ENST00000449943 TMPOP42166 694 aaKnown RBP14.37□□□□□ -0.11
SYVN1-204ENST00000449943 AAMPQ13685 434 aa14.37□□□□□ -0.11
SYVN1-204ENST00000449943 SSH1Q8WYL5 1049 aa14.37□□□□□ -0.11
SYVN1-204ENST00000449943 IDI1Q13907 227 aa14.36□□□□□ -0.11
SYVN1-204ENST00000449943 PPLO60437 1756 aa14.36□□□□□ -0.11
SYVN1-204ENST00000449943 TRIM27P14373 513 aa14.36□□□□□ -0.11
SYVN1-204ENST00000449943 TBC1D32Q96NH3 1257 aa14.36□□□□□ -0.11
SYVN1-204ENST00000449943 GLI2P10070 1586 aa14.36□□□□□ -0.11
SYVN1-204ENST00000449943 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.36□□□□□ -0.11
SYVN1-204ENST00000449943 FRMPD1Q5SYB0 1578 aa14.35□□□□□ -0.11
SYVN1-204ENST00000449943 RIPK4P57078 832 aa14.35□□□□□ -0.11
SYVN1-204ENST00000449943 TBC1D2Q9BYX2 928 aa14.35□□□□□ -0.11
SYVN1-204ENST00000449943 NOB1Q9ULX3 412 aaKnown RBP14.35□□□□□ -0.11
SYVN1-204ENST00000449943 ZC3H13Q5T200 1668 aaKnown RBP14.35□□□□□ -0.11
SYVN1-204ENST00000449943 PRAM1Q96QH2 718 aa14.35□□□□□ -0.11
SYVN1-204ENST00000449943 ABCC3O15438 1527 aa14.35□□□□□ -0.11
SYVN1-204ENST00000449943 NSD2O96028 1365 aa14.34□□□□□ -0.11
SYVN1-204ENST00000449943 NLRP1Q9C000 1473 aa14.34□□□□□ -0.11
SYVN1-204ENST00000449943 TRIM35Q9UPQ4 493 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms