RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 NRXN1Q9ULB1 1477 aa25.42■■□□□ 1.66
CLTCL1-203ENST00000449918 DHX57Q6P158 1386 aaKnown RBP25.42■■□□□ 1.66
CLTCL1-203ENST00000449918 SHPRHQ149N8 1683 aa25.42■■□□□ 1.66
CLTCL1-203ENST00000449918 NUTM2BA6NNL0 878 aaPredicted RBP25.41■■□□□ 1.66
CLTCL1-203ENST00000449918 NUTM2EB1AL46 878 aaPredicted RBP25.41■■□□□ 1.66
CLTCL1-203ENST00000449918 NUTM2AQ8IVF1 878 aaPredicted RBP25.41■■□□□ 1.66
CLTCL1-203ENST00000449918 NHSL1Q5SYE7 1610 aa25.41■■□□□ 1.66
CLTCL1-203ENST00000449918 STAC3Q96MF2 364 aa25.4■■□□□ 1.66
CLTCL1-203ENST00000449918 LRP6O75581 1613 aa25.39■■□□□ 1.66
CLTCL1-203ENST00000449918 ESCO1Q5FWF5 840 aa25.39■■□□□ 1.66
CLTCL1-203ENST00000449918 ZNF772Q68DY9 489 aaPredicted RBP25.38■■□□□ 1.65
CLTCL1-203ENST00000449918 CDC42BPGQ6DT37 1551 aa25.37■■□□□ 1.65
CLTCL1-203ENST00000449918 DCAF11Q8TEB1 546 aa25.37■■□□□ 1.65
CLTCL1-203ENST00000449918 KDM2AQ9Y2K7 1162 aa25.37■■□□□ 1.65
CLTCL1-203ENST00000449918 SOS2Q07890 1332 aaPredicted RBP25.37■■□□□ 1.65
CLTCL1-203ENST00000449918 PLEKHH1Q9ULM0 1364 aa25.36■■□□□ 1.65
CLTCL1-203ENST00000449918 LAMC1P11047 1609 aa25.34■■□□□ 1.65
CLTCL1-203ENST00000449918 PNPLA6Q8IY17 1366 aa25.34■■□□□ 1.65
CLTCL1-203ENST00000449918 KNDC1Q76NI1 1749 aa25.34■■□□□ 1.65
CLTCL1-203ENST00000449918 NPHP3Q7Z494 1330 aa25.34■■□□□ 1.65
CLTCL1-203ENST00000449918 NUTM2FA1L443 756 aa25.32■■□□□ 1.64
CLTCL1-203ENST00000449918 PRAM1Q96QH2 718 aa25.31■■□□□ 1.64
CLTCL1-203ENST00000449918 POGKQ9P215 609 aa25.3■■□□□ 1.64
CLTCL1-203ENST00000449918 FOXO3O43524 673 aa25.29■■□□□ 1.64
CLTCL1-203ENST00000449918 SAFB2Q14151 953 aaKnown RBP eCLIP25.27■■□□□ 1.64
CLTCL1-203ENST00000449918 C8orf37Q96NL8 207 aa25.26■■□□□ 1.63
CLTCL1-203ENST00000449918 TRAK1Q9UPV9 953 aa25.25■■□□□ 1.63
CLTCL1-203ENST00000449918 AFF2P51816 1311 aa25.25■■□□□ 1.63
CLTCL1-203ENST00000449918 ADAMTS2O95450 1211 aa25.24■■□□□ 1.63
CLTCL1-203ENST00000449918 DLC1Q96QB1 1528 aa25.23■■□□□ 1.63
CLTCL1-203ENST00000449918 RXRBP28702 533 aa25.23■■□□□ 1.63
CLTCL1-203ENST00000449918 XPCQ01831 940 aaPredicted RBP25.22■■□□□ 1.63
CLTCL1-203ENST00000449918 ADGRB1O14514 1584 aa25.22■■□□□ 1.63
CLTCL1-203ENST00000449918 NGLY1Q96IV0 654 aa25.21■■□□□ 1.63
CLTCL1-203ENST00000449918 PXDNQ92626 1479 aa25.2■■□□□ 1.62
CLTCL1-203ENST00000449918 FMN2Q9NZ56 1722 aa25.2■■□□□ 1.62
CLTCL1-203ENST00000449918 PHF8Q9UPP1 1060 aa25.19■■□□□ 1.62
CLTCL1-203ENST00000449918 KRT28Q7Z3Y7 464 aa25.17■■□□□ 1.62
CLTCL1-203ENST00000449918 PSME1Q06323 249 aa25.16■■□□□ 1.62
CLTCL1-203ENST00000449918 QTRT2Q9H974 415 aaKnown RBP25.16■■□□□ 1.62
CLTCL1-203ENST00000449918 KIF1AQ12756 1690 aa25.14■■□□□ 1.62
CLTCL1-203ENST00000449918 HIRIP3Q9BW71 556 aaPredicted RBP25.14■■□□□ 1.62
CLTCL1-203ENST00000449918 SPATA31A3Q5VYP0 1347 aa25.13■■□□□ 1.61
CLTCL1-203ENST00000449918 MINK1Q8N4C8 1332 aaPredicted RBP25.13■■□□□ 1.61
CLTCL1-203ENST00000449918 ANKARQ7Z5J8 1434 aa25.13■■□□□ 1.61
CLTCL1-203ENST00000449918 EIF3AQ14152 1382 aaKnown RBP25.13■■□□□ 1.61
CLTCL1-203ENST00000449918 COL22A1Q8NFW1 1626 aaPredicted RBP25.12■■□□□ 1.61
CLTCL1-203ENST00000449918 RBM6P78332 1123 aaKnown RBP25.11■■□□□ 1.61
CLTCL1-203ENST00000449918 FNBP4Q8N3X1 1017 aaPredicted RBP25.11■■□□□ 1.61
CLTCL1-203ENST00000449918 USP21Q9UK80 565 aa25.11■■□□□ 1.61
CLTCL1-203ENST00000449918 WASLO00401 505 aaPredicted RBP25.1■■□□□ 1.61
CLTCL1-203ENST00000449918 ADGRB2O60241 1585 aa25.09■■□□□ 1.61
CLTCL1-203ENST00000449918 CDK12Q9NYV4 1490 aaPredicted RBP25.09■■□□□ 1.61
CLTCL1-203ENST00000449918 PMFBP1Q8TBY8 1022 aa25.08■■□□□ 1.61
CLTCL1-203ENST00000449918 TRPC5Q9UL62 973 aaPredicted RBP25.07■■□□□ 1.6
CLTCL1-203ENST00000449918 SBNO1A3KN83 1393 aa25.06■■□□□ 1.6
CLTCL1-203ENST00000449918 RGPD8O14715 1765 aaPredicted RBP25.04■■□□□ 1.6
CLTCL1-203ENST00000449918 HAP1P54257 671 aaPredicted RBP25.04■■□□□ 1.6
CLTCL1-203ENST00000449918 LMOD2Q6P5Q4 547 aa25.04■■□□□ 1.6
CLTCL1-203ENST00000449918 TNS3Q68CZ2 1445 aa25.03■■□□□ 1.6
CLTCL1-203ENST00000449918 NBPF1Q3BBV0 1214 aa25.02■■□□□ 1.6
CLTCL1-203ENST00000449918 L3MBTL2Q969R5 705 aa25.02■■□□□ 1.6
CLTCL1-203ENST00000449918 PRR36Q9H6K5 1346 aa25.02■■□□□ 1.6
CLTCL1-203ENST00000449918 ARHGEF10O15013 1369 aa25.02■■□□□ 1.6
CLTCL1-203ENST00000449918 GPRASP1Q5JY77 1395 aa25.02■■□□□ 1.6
CLTCL1-203ENST00000449918 TULP4Q9NRJ4 1543 aa25.02■■□□□ 1.6
CLTCL1-203ENST00000449918 KIAA1210Q9ULL0 1709 aa25■■□□□ 1.59
CLTCL1-203ENST00000449918 NGDNQ8NEJ9 315 aaKnown RBP25■■□□□ 1.59
CLTCL1-203ENST00000449918 SIN3AQ96ST3 1273 aa25■■□□□ 1.59
CLTCL1-203ENST00000449918 USP32Q8NFA0 1604 aa25■■□□□ 1.59
CLTCL1-203ENST00000449918 NEUROD1Q13562 356 aa24.99■■□□□ 1.59
CLTCL1-203ENST00000449918 NUDT16Q96DE0 195 aaKnown RBP24.98■■□□□ 1.59
CLTCL1-203ENST00000449918 CDK19Q9BWU1 502 aa24.98■■□□□ 1.59
CLTCL1-203ENST00000449918 ARHGEF28Q8N1W1 1705 aaKnown RBP24.98■■□□□ 1.59
CLTCL1-203ENST00000449918 CABLES1Q8TDN4 633 aa24.97■■□□□ 1.59
CLTCL1-203ENST00000449918 UPF1Q92900 1129 aaKnown RBP eCLIP24.97■■□□□ 1.59
CLTCL1-203ENST00000449918 BCL9LQ86UU0 1499 aa24.96■■□□□ 1.59
CLTCL1-203ENST00000449918 RGS12O14924 1447 aa24.96■■□□□ 1.59
CLTCL1-203ENST00000449918 ATRNO75882 1429 aa24.96■■□□□ 1.59
CLTCL1-203ENST00000449918 PLEKHG5O94827 1062 aa24.96■■□□□ 1.59
CLTCL1-203ENST00000449918 UNC5CLQ8IV45 518 aa24.94■■□□□ 1.58
CLTCL1-203ENST00000449918 PAK3O75914 559 aaPredicted RBP24.92■■□□□ 1.58
CLTCL1-203ENST00000449918 GJD4Q96KN9 370 aaPredicted RBP24.92■■□□□ 1.58
CLTCL1-203ENST00000449918 CCDC61Q9Y6R9 512 aa24.92■■□□□ 1.58
CLTCL1-203ENST00000449918 MARF1Q9Y4F3 1742 aaKnown RBP24.92■■□□□ 1.58
CLTCL1-203ENST00000449918 CENPJQ9HC77 1338 aaPredicted RBP24.91■■□□□ 1.58
CLTCL1-203ENST00000449918 SLIT2O94813 1529 aa24.9■■□□□ 1.58
CLTCL1-203ENST00000449918 ATP7BP35670 1465 aa24.89■■□□□ 1.58
CLTCL1-203ENST00000449918 SRPK2P78362 688 aaKnown RBP24.87■■□□□ 1.57
CLTCL1-203ENST00000449918 TRIM26Q12899 539 aaPredicted RBP24.87■■□□□ 1.57
CLTCL1-203ENST00000449918 PLEKHG3A1L390 1219 aa24.86■■□□□ 1.57
CLTCL1-203ENST00000449918 FAM83GA6ND36 823 aa24.86■■□□□ 1.57
CLTCL1-203ENST00000449918 TRPM3Q9HCF6 1732 aaPredicted RBP24.85■■□□□ 1.57
CLTCL1-203ENST00000449918 ACEP12821 1306 aa24.85■■□□□ 1.57
CLTCL1-203ENST00000449918 ITSN1Q15811 1721 aa24.84■■□□□ 1.57
CLTCL1-203ENST00000449918 ATAD2Q6PL18 1390 aa24.84■■□□□ 1.57
CLTCL1-203ENST00000449918 NBPF8Q3BBV2 869 aa24.84■■□□□ 1.57
CLTCL1-203ENST00000449918 POLR3AO14802 1390 aaPredicted RBP24.83■■□□□ 1.57
CLTCL1-203ENST00000449918 ROCK2O75116 1388 aaKnown RBP24.83■■□□□ 1.57
CLTCL1-203ENST00000449918 VPS72Q15906 364 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms