RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 STRCP1A6NGW2 1772 aa12.47□□□□□ -0.41
NPHP1-208ENST00000449600 KIF14Q15058 1648 aa12.47□□□□□ -0.41
NPHP1-208ENST00000449600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.46□□□□□ -0.41
NPHP1-208ENST00000449600 RGL2O15211 777 aa12.46□□□□□ -0.41
NPHP1-208ENST00000449600 CDK11AQ9UQ88 783 aaPredicted RBP12.46□□□□□ -0.41
NPHP1-208ENST00000449600 AXIN2Q9Y2T1 843 aa12.46□□□□□ -0.41
NPHP1-208ENST00000449600 THEMISQ8N1K5 641 aaPredicted RBP12.45□□□□□ -0.42
NPHP1-208ENST00000449600 TROQ12816 1431 aaPredicted RBP12.45□□□□□ -0.42
NPHP1-208ENST00000449600 ITSN2Q9NZM3 1697 aa12.45□□□□□ -0.42
NPHP1-208ENST00000449600 PPP1R37O75864 691 aa12.44□□□□□ -0.42
NPHP1-208ENST00000449600 TRIM26Q12899 539 aaPredicted RBP12.44□□□□□ -0.42
NPHP1-208ENST00000449600 TNRQ92752 1358 aa12.43□□□□□ -0.42
NPHP1-208ENST00000449600 SAMD9LQ8IVG5 1584 aa12.43□□□□□ -0.42
NPHP1-208ENST00000449600 CDC42BPBQ9Y5S2 1711 aa12.43□□□□□ -0.42
NPHP1-208ENST00000449600 IQGAP1P46940 1657 aa12.43□□□□□ -0.42
NPHP1-208ENST00000449600 CDK12Q9NYV4 1490 aaPredicted RBP12.43□□□□□ -0.42
NPHP1-208ENST00000449600 PPARGC1BQ86YN6 1023 aaKnown RBP12.43□□□□□ -0.42
NPHP1-208ENST00000449600 TMC2Q8TDI7 906 aa12.43□□□□□ -0.42
NPHP1-208ENST00000449600 CASKIN1Q8WXD9 1431 aa12.42□□□□□ -0.42
NPHP1-208ENST00000449600 FYCO1Q9BQS8 1478 aa12.41□□□□□ -0.42
NPHP1-208ENST00000449600 ZNF772Q68DY9 489 aaPredicted RBP12.41□□□□□ -0.42
NPHP1-208ENST00000449600 A2MP01023 1474 aa12.4□□□□□ -0.42
NPHP1-208ENST00000449600 NLRP1Q9C000 1473 aa12.4□□□□□ -0.42
NPHP1-208ENST00000449600 KDM5DQ9BY66 1539 aa12.4□□□□□ -0.42
NPHP1-208ENST00000449600 PREX2Q70Z35 1606 aa12.4□□□□□ -0.42
NPHP1-208ENST00000449600 FAM135AQ9P2D6 1515 aa12.39□□□□□ -0.43
NPHP1-208ENST00000449600 GGT6Q6P531 493 aa12.39□□□□□ -0.43
NPHP1-208ENST00000449600 PZPP20742 1482 aa12.39□□□□□ -0.43
NPHP1-208ENST00000449600 UGGT1Q9NYU2 1555 aa12.39□□□□□ -0.43
NPHP1-208ENST00000449600 SPAG9O60271 1321 aaKnown RBP12.38□□□□□ -0.43
NPHP1-208ENST00000449600 TRIM52Q96A61 297 aa12.38□□□□□ -0.43
NPHP1-208ENST00000449600 JCADQ9P266 1359 aa12.38□□□□□ -0.43
NPHP1-208ENST00000449600 MAP3K1Q13233 1512 aa12.37□□□□□ -0.43
NPHP1-208ENST00000449600 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
NPHP1-208ENST00000449600 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
NPHP1-208ENST00000449600 FBXO31Q5XUX0 539 aaPredicted RBP12.36□□□□□ -0.43
NPHP1-208ENST00000449600 ADGRD1Q6QNK2 874 aa12.36□□□□□ -0.43
NPHP1-208ENST00000449600 PTCD2Q8WV60 388 aaKnown RBP12.36□□□□□ -0.43
NPHP1-208ENST00000449600 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
NPHP1-208ENST00000449600 ROBO1Q9Y6N7 1651 aa12.35□□□□□ -0.43
NPHP1-208ENST00000449600 INO80Q9ULG1 1556 aaPredicted RBP12.35□□□□□ -0.43
NPHP1-208ENST00000449600 CCDC18Q5T9S5 1454 aa12.35□□□□□ -0.43
NPHP1-208ENST00000449600 XIRP1Q702N8 1843 aaKnown RBP12.35□□□□□ -0.43
NPHP1-208ENST00000449600 ARHGAP33O14559 1287 aa12.35□□□□□ -0.43
NPHP1-208ENST00000449600 RXRBP28702 533 aa12.35□□□□□ -0.43
NPHP1-208ENST00000449600 ZC3H13Q5T200 1668 aaKnown RBP12.35□□□□□ -0.43
NPHP1-208ENST00000449600 LRRC9Q6ZRR7 1453 aa12.34□□□□□ -0.43
NPHP1-208ENST00000449600 SPATA31A6Q5VVP1 1343 aa12.34□□□□□ -0.43
NPHP1-208ENST00000449600 PSDA5PKW4 1024 aaPredicted RBP12.33□□□□□ -0.44
NPHP1-208ENST00000449600 TIAM1Q13009 1591 aa12.33□□□□□ -0.44
NPHP1-208ENST00000449600 LRP6O75581 1613 aa12.33□□□□□ -0.44
NPHP1-208ENST00000449600 MTUS2Q5JR59 1369 aa12.32□□□□□ -0.44
NPHP1-208ENST00000449600 KIAA1107Q9UPP5 1409 aa12.32□□□□□ -0.44
NPHP1-208ENST00000449600 FGD6Q6ZV73 1430 aa12.31□□□□□ -0.44
NPHP1-208ENST00000449600 HRO43593 1189 aa12.31□□□□□ -0.44
NPHP1-208ENST00000449600 FOXK1P85037 733 aa12.31□□□□□ -0.44
NPHP1-208ENST00000449600 DMRTA1Q5VZB9 504 aa12.3□□□□□ -0.44
NPHP1-208ENST00000449600 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
NPHP1-208ENST00000449600 HCSTQ9UBK5 93 aa12.3□□□□□ -0.44
NPHP1-208ENST00000449600 SYCP2Q9BX26 1530 aa12.3□□□□□ -0.44
NPHP1-208ENST00000449600 TK2O00142 265 aa12.29□□□□□ -0.44
NPHP1-208ENST00000449600 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
NPHP1-208ENST00000449600 SETBP1Q9Y6X0 1596 aa12.29□□□□□ -0.44
NPHP1-208ENST00000449600 TMEM94Q12767 1356 aa12.29□□□□□ -0.44
NPHP1-208ENST00000449600 ADGBQ8N7X0 1667 aa12.28□□□□□ -0.44
NPHP1-208ENST00000449600 COL16A1Q07092 1604 aaPredicted RBP12.27□□□□□ -0.44
NPHP1-208ENST00000449600 PSEN2P49810 448 aa12.27□□□□□ -0.45
NPHP1-208ENST00000449600 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.45
NPHP1-208ENST00000449600 PLPP6Q8IY26 295 aa12.27□□□□□ -0.45
NPHP1-208ENST00000449600 SCAF11Q99590 1463 aaKnown RBP12.27□□□□□ -0.45
NPHP1-208ENST00000449600 PHLPP1O60346 1717 aa12.26□□□□□ -0.45
NPHP1-208ENST00000449600 CDC42BPAQ5VT25 1732 aa12.26□□□□□ -0.45
NPHP1-208ENST00000449600 GPHNQ9NQX3 736 aaPredicted RBP12.26□□□□□ -0.45
NPHP1-208ENST00000449600 PLEKHH2Q8IVE3 1493 aa12.26□□□□□ -0.45
NPHP1-208ENST00000449600 MEX3CQ5U5Q3 659 aaKnown RBP12.25□□□□□ -0.45
NPHP1-208ENST00000449600 DHX29Q7Z478 1369 aaKnown RBP12.25□□□□□ -0.45
NPHP1-208ENST00000449600 RGS12O14924 1447 aa12.25□□□□□ -0.45
NPHP1-208ENST00000449600 ARHGAP23Q9P227 1491 aa12.25□□□□□ -0.45
NPHP1-208ENST00000449600 EHBP1L1Q8N3D4 1523 aa12.24□□□□□ -0.45
NPHP1-208ENST00000449600 SLAIN2Q9P270 581 aa12.24□□□□□ -0.45
NPHP1-208ENST00000449600 SLIT1O75093 1534 aa12.23□□□□□ -0.45
NPHP1-208ENST00000449600 WASHC2CQ9Y4E1 1318 aa12.23□□□□□ -0.45
NPHP1-208ENST00000449600 DSG2Q14126 1118 aa12.23□□□□□ -0.45
NPHP1-208ENST00000449600 GPATCH8Q9UKJ3 1502 aaKnown RBP12.22□□□□□ -0.45
NPHP1-208ENST00000449600 RTEL1-TNFRSF6BF6WH68 1400 aa12.22□□□□□ -0.45
NPHP1-208ENST00000449600 LTKP29376 864 aa12.22□□□□□ -0.45
NPHP1-208ENST00000449600 KCNA6P17658 529 aa12.21□□□□□ -0.45
NPHP1-208ENST00000449600 HS6ST3Q8IZP7 471 aa12.21□□□□□ -0.45
NPHP1-208ENST00000449600 ZNF777Q9ULD5 760 aaPredicted RBP12.21□□□□□ -0.45
NPHP1-208ENST00000449600 ABCC3O15438 1527 aa12.21□□□□□ -0.46
NPHP1-208ENST00000449600 PRDM15P57071 1507 aaPredicted RBP12.21□□□□□ -0.46
NPHP1-208ENST00000449600 ATAD2Q6PL18 1390 aa12.2□□□□□ -0.46
NPHP1-208ENST00000449600 SHPRHQ149N8 1683 aa12.2□□□□□ -0.46
NPHP1-208ENST00000449600 RBM6P78332 1123 aaKnown RBP12.2□□□□□ -0.46
NPHP1-208ENST00000449600 PPP4R3BQ5MIZ7 849 aa12.2□□□□□ -0.46
NPHP1-208ENST00000449600 RBM33Q96EV2 1170 aaKnown RBP12.2□□□□□ -0.46
NPHP1-208ENST00000449600 NCOA2Q15596 1464 aa12.2□□□□□ -0.46
NPHP1-208ENST00000449600 LRRIQ1Q96JM4 1722 aa12.2□□□□□ -0.46
NPHP1-208ENST00000449600 EP400Q96L91 3159 aa12.19□□□□□ -0.46
NPHP1-208ENST00000449600 TXNDC2Q86VQ3 553 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms