RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 ESCO1Q5FWF5 840 aa20.2■□□□□ 0.82
TOM1-211ENST00000449508 PNPLA6Q8IY17 1366 aa20.2■□□□□ 0.82
TOM1-211ENST00000449508 C14orf93Q9H972 538 aaKnown RBP20.19■□□□□ 0.82
TOM1-211ENST00000449508 SOS2Q07890 1332 aaPredicted RBP20.19■□□□□ 0.82
TOM1-211ENST00000449508 TECPR2O15040 1411 aa20.19■□□□□ 0.82
TOM1-211ENST00000449508 NUTM2FA1L443 756 aa20.18■□□□□ 0.82
TOM1-211ENST00000449508 CFAP70Q5T0N1 1121 aa20.18■□□□□ 0.82
TOM1-211ENST00000449508 YTHDC2Q9H6S0 1430 aaKnown RBP20.18■□□□□ 0.82
TOM1-211ENST00000449508 LAMC1P11047 1609 aa20.17■□□□□ 0.82
TOM1-211ENST00000449508 AFF2P51816 1311 aa20.17■□□□□ 0.82
TOM1-211ENST00000449508 CDC42BPGQ6DT37 1551 aa20.17■□□□□ 0.82
TOM1-211ENST00000449508 C8orf37Q96NL8 207 aa20.16■□□□□ 0.82
TOM1-211ENST00000449508 PLEKHH1Q9ULM0 1364 aa20.16■□□□□ 0.82
TOM1-211ENST00000449508 KNDC1Q76NI1 1749 aa20.16■□□□□ 0.82
TOM1-211ENST00000449508 RXRBP28702 533 aa20.15■□□□□ 0.82
TOM1-211ENST00000449508 DHX57Q6P158 1386 aaKnown RBP20.15■□□□□ 0.82
TOM1-211ENST00000449508 NPHP3Q7Z494 1330 aa20.14■□□□□ 0.81
TOM1-211ENST00000449508 FOXO3O43524 673 aa20.14■□□□□ 0.81
TOM1-211ENST00000449508 ADAMTS2O95450 1211 aa20.14■□□□□ 0.81
TOM1-211ENST00000449508 HRCP23327 699 aa20.14■□□□□ 0.81
TOM1-211ENST00000449508 SIRT1Q96EB6 747 aa20.14■□□□□ 0.81
TOM1-211ENST00000449508 MYOM2P54296 1465 aa20.13■□□□□ 0.81
TOM1-211ENST00000449508 NRXN1Q9ULB1 1477 aa20.13■□□□□ 0.81
TOM1-211ENST00000449508 NGLY1Q96IV0 654 aa20.12■□□□□ 0.81
TOM1-211ENST00000449508 XPCQ01831 940 aaPredicted RBP20.11■□□□□ 0.81
TOM1-211ENST00000449508 QTRT2Q9H974 415 aaKnown RBP20.11■□□□□ 0.81
TOM1-211ENST00000449508 KDM2AQ9Y2K7 1162 aa20.11■□□□□ 0.81
TOM1-211ENST00000449508 SAFB2Q14151 953 aaKnown RBP eCLIP20.09■□□□□ 0.81
TOM1-211ENST00000449508 DCAF11Q8TEB1 546 aa20.09■□□□□ 0.81
TOM1-211ENST00000449508 PRAM1Q96QH2 718 aa20.08■□□□□ 0.81
TOM1-211ENST00000449508 FMN2Q9NZ56 1722 aa20.07■□□□□ 0.8
TOM1-211ENST00000449508 POGKQ9P215 609 aa20.07■□□□□ 0.8
TOM1-211ENST00000449508 PXDNQ92626 1479 aa20.06■□□□□ 0.8
TOM1-211ENST00000449508 RBM6P78332 1123 aaKnown RBP20.05■□□□□ 0.8
TOM1-211ENST00000449508 RGPD8O14715 1765 aaPredicted RBP20.05■□□□□ 0.8
TOM1-211ENST00000449508 STAC3Q96MF2 364 aa20.04■□□□□ 0.8
TOM1-211ENST00000449508 USP21Q9UK80 565 aa20.04■□□□□ 0.8
TOM1-211ENST00000449508 COL22A1Q8NFW1 1626 aaPredicted RBP20.04■□□□□ 0.8
TOM1-211ENST00000449508 KRT28Q7Z3Y7 464 aa20.03■□□□□ 0.8
TOM1-211ENST00000449508 TRAK1Q9UPV9 953 aa20.03■□□□□ 0.8
TOM1-211ENST00000449508 CDK12Q9NYV4 1490 aaPredicted RBP20.03■□□□□ 0.8
TOM1-211ENST00000449508 PHF8Q9UPP1 1060 aa20.02■□□□□ 0.8
TOM1-211ENST00000449508 KIF1AQ12756 1690 aa20.01■□□□□ 0.79
TOM1-211ENST00000449508 FNBP4Q8N3X1 1017 aaPredicted RBP20.01■□□□□ 0.79
TOM1-211ENST00000449508 UPF1Q92900 1129 aaKnown RBP eCLIP20.01■□□□□ 0.79
TOM1-211ENST00000449508 DLC1Q96QB1 1528 aa20.01■□□□□ 0.79
TOM1-211ENST00000449508 SPATA31A3Q5VYP0 1347 aa20■□□□□ 0.79
TOM1-211ENST00000449508 ADGRB1O14514 1584 aa20■□□□□ 0.79
TOM1-211ENST00000449508 PSME1Q06323 249 aa19.99■□□□□ 0.79
TOM1-211ENST00000449508 TRPC5Q9UL62 973 aaPredicted RBP19.99■□□□□ 0.79
TOM1-211ENST00000449508 HIRIP3Q9BW71 556 aaPredicted RBP19.98■□□□□ 0.79
TOM1-211ENST00000449508 MARF1Q9Y4F3 1742 aaKnown RBP19.97■□□□□ 0.79
TOM1-211ENST00000449508 PMFBP1Q8TBY8 1022 aa19.96■□□□□ 0.79
TOM1-211ENST00000449508 MINK1Q8N4C8 1332 aaPredicted RBP19.96■□□□□ 0.79
TOM1-211ENST00000449508 RGS12O14924 1447 aa19.95■□□□□ 0.78
TOM1-211ENST00000449508 LMOD2Q6P5Q4 547 aa19.94■□□□□ 0.78
TOM1-211ENST00000449508 PLEKHG5O94827 1062 aa19.93■□□□□ 0.78
TOM1-211ENST00000449508 HAP1P54257 671 aaPredicted RBP19.93■□□□□ 0.78
TOM1-211ENST00000449508 ANKARQ7Z5J8 1434 aa19.93■□□□□ 0.78
TOM1-211ENST00000449508 USP32Q8NFA0 1604 aa19.92■□□□□ 0.78
TOM1-211ENST00000449508 WASLO00401 505 aaPredicted RBP19.92■□□□□ 0.78
TOM1-211ENST00000449508 ATRNO75882 1429 aa19.92■□□□□ 0.78
TOM1-211ENST00000449508 ADGRB2O60241 1585 aa19.91■□□□□ 0.78
TOM1-211ENST00000449508 TNS3Q68CZ2 1445 aa19.91■□□□□ 0.78
TOM1-211ENST00000449508 BCL9LQ86UU0 1499 aa19.91■□□□□ 0.78
TOM1-211ENST00000449508 CABLES1Q8TDN4 633 aa19.9■□□□□ 0.78
TOM1-211ENST00000449508 SBNO1A3KN83 1393 aa19.9■□□□□ 0.78
TOM1-211ENST00000449508 EIF3AQ14152 1382 aaKnown RBP19.89■□□□□ 0.77
TOM1-211ENST00000449508 PRR36Q9H6K5 1346 aa19.88■□□□□ 0.77
TOM1-211ENST00000449508 GJD4Q96KN9 370 aaPredicted RBP19.88■□□□□ 0.77
TOM1-211ENST00000449508 UNC5CLQ8IV45 518 aa19.87■□□□□ 0.77
TOM1-211ENST00000449508 ARHGEF10O15013 1369 aa19.86■□□□□ 0.77
TOM1-211ENST00000449508 GPRASP1Q5JY77 1395 aa19.86■□□□□ 0.77
TOM1-211ENST00000449508 ARHGEF28Q8N1W1 1705 aaKnown RBP19.86■□□□□ 0.77
TOM1-211ENST00000449508 TULP4Q9NRJ4 1543 aa19.86■□□□□ 0.77
TOM1-211ENST00000449508 NGDNQ8NEJ9 315 aaKnown RBP19.85■□□□□ 0.77
TOM1-211ENST00000449508 SLIT2O94813 1529 aa19.84■□□□□ 0.77
TOM1-211ENST00000449508 ATAD2Q6PL18 1390 aa19.83■□□□□ 0.77
TOM1-211ENST00000449508 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.83■□□□□ 0.77
TOM1-211ENST00000449508 NBPF1Q3BBV0 1214 aa19.83■□□□□ 0.77
TOM1-211ENST00000449508 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.77
TOM1-211ENST00000449508 KIAA1210Q9ULL0 1709 aa19.82■□□□□ 0.76
TOM1-211ENST00000449508 CDK19Q9BWU1 502 aa19.82■□□□□ 0.76
TOM1-211ENST00000449508 PAK3O75914 559 aaPredicted RBP19.81■□□□□ 0.76
TOM1-211ENST00000449508 TRPM3Q9HCF6 1732 aaPredicted RBP19.81■□□□□ 0.76
TOM1-211ENST00000449508 ABCA3Q99758 1704 aa19.79■□□□□ 0.76
TOM1-211ENST00000449508 FAM83GA6ND36 823 aa19.79■□□□□ 0.76
TOM1-211ENST00000449508 ITSN1Q15811 1721 aa19.79■□□□□ 0.76
TOM1-211ENST00000449508 RALGAPBQ86X10 1494 aa19.79■□□□□ 0.76
TOM1-211ENST00000449508 CCDC9Q9Y3X0 531 aaKnown RBP19.78■□□□□ 0.76
TOM1-211ENST00000449508 PLCH1Q4KWH8 1693 aa19.78■□□□□ 0.76
TOM1-211ENST00000449508 ALS2Q96Q42 1657 aa19.78■□□□□ 0.76
TOM1-211ENST00000449508 VPS72Q15906 364 aa19.77■□□□□ 0.76
TOM1-211ENST00000449508 L3MBTL2Q969R5 705 aa19.77■□□□□ 0.76
TOM1-211ENST00000449508 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
TOM1-211ENST00000449508 ATP7BP35670 1465 aa19.77■□□□□ 0.76
TOM1-211ENST00000449508 GLI3P10071 1580 aa19.77■□□□□ 0.76
TOM1-211ENST00000449508 NWD2Q9ULI1 1742 aa19.76■□□□□ 0.75
TOM1-211ENST00000449508 NEUROD1Q13562 356 aa19.75■□□□□ 0.75
TOM1-211ENST00000449508 CCDC61Q9Y6R9 512 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms