RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 COL22A1Q8NFW1 1626 aaPredicted RBP10.24□□□□□ -0.77
PBRM1-216ENST00000449505 NPHP3Q7Z494 1330 aa10.24□□□□□ -0.77
PBRM1-216ENST00000449505 KIF1AQ12756 1690 aa10.24□□□□□ -0.77
PBRM1-216ENST00000449505 MYOM2P54296 1465 aa10.23□□□□□ -0.77
PBRM1-216ENST00000449505 ADRA2BP18089 450 aa10.23□□□□□ -0.77
PBRM1-216ENST00000449505 RXRBP28702 533 aa10.23□□□□□ -0.77
PBRM1-216ENST00000449505 MPHOSPH9Q99550 1183 aa10.23□□□□□ -0.77
PBRM1-216ENST00000449505 AFF2P51816 1311 aa10.23□□□□□ -0.77
PBRM1-216ENST00000449505 SOS2Q07890 1332 aaPredicted RBP10.22□□□□□ -0.77
PBRM1-216ENST00000449505 C8orf37Q96NL8 207 aa10.21□□□□□ -0.77
PBRM1-216ENST00000449505 ABCC11Q96J66 1382 aa10.21□□□□□ -0.78
PBRM1-216ENST00000449505 RGL3Q3MIN7 710 aa10.2□□□□□ -0.78
PBRM1-216ENST00000449505 ADGRF5Q8IZF2 1346 aa10.2□□□□□ -0.78
PBRM1-216ENST00000449505 NGLY1Q96IV0 654 aa10.2□□□□□ -0.78
PBRM1-216ENST00000449505 YTHDC2Q9H6S0 1430 aaKnown RBP10.2□□□□□ -0.78
PBRM1-216ENST00000449505 FMN2Q9NZ56 1722 aa10.2□□□□□ -0.78
PBRM1-216ENST00000449505 NRXN1Q9ULB1 1477 aa10.19□□□□□ -0.78
PBRM1-216ENST00000449505 RBM6P78332 1123 aaKnown RBP10.19□□□□□ -0.78
PBRM1-216ENST00000449505 ESCO1Q5FWF5 840 aa10.19□□□□□ -0.78
PBRM1-216ENST00000449505 PXDNQ92626 1479 aa10.18□□□□□ -0.78
PBRM1-216ENST00000449505 DHX57Q6P158 1386 aaKnown RBP10.18□□□□□ -0.78
PBRM1-216ENST00000449505 DDX17Q92841 729 aaKnown RBP10.18□□□□□ -0.78
PBRM1-216ENST00000449505 ORAI2Q96SN7 254 aa10.18□□□□□ -0.78
PBRM1-216ENST00000449505 RGS12O14924 1447 aa10.17□□□□□ -0.78
PBRM1-216ENST00000449505 EIF3AQ14152 1382 aaKnown RBP10.17□□□□□ -0.78
PBRM1-216ENST00000449505 MARF1Q9Y4F3 1742 aaKnown RBP10.17□□□□□ -0.78
PBRM1-216ENST00000449505 ADAMTS2O95450 1211 aa10.17□□□□□ -0.78
PBRM1-216ENST00000449505 SIRT1Q96EB6 747 aa10.17□□□□□ -0.78
PBRM1-216ENST00000449505 STK26Q9P289 416 aa10.17□□□□□ -0.78
PBRM1-216ENST00000449505 DLC1Q96QB1 1528 aa10.17□□□□□ -0.78
PBRM1-216ENST00000449505 RAB3GAP2Q9H2M9 1393 aa10.16□□□□□ -0.78
PBRM1-216ENST00000449505 TRPC5Q9UL62 973 aaPredicted RBP10.16□□□□□ -0.78
PBRM1-216ENST00000449505 ADGRB2O60241 1585 aa10.16□□□□□ -0.78
PBRM1-216ENST00000449505 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.16□□□□□ -0.78
PBRM1-216ENST00000449505 ATAD2Q6PL18 1390 aa10.15□□□□□ -0.78
PBRM1-216ENST00000449505 UPF1Q92900 1129 aaKnown RBP eCLIP10.15□□□□□ -0.78
PBRM1-216ENST00000449505 QTRT2Q9H974 415 aaKnown RBP10.15□□□□□ -0.78
PBRM1-216ENST00000449505 USP21Q9UK80 565 aa10.15□□□□□ -0.78
PBRM1-216ENST00000449505 ANKARQ7Z5J8 1434 aa10.15□□□□□ -0.79
PBRM1-216ENST00000449505 STAC3Q96MF2 364 aa10.14□□□□□ -0.79
PBRM1-216ENST00000449505 C14orf93Q9H972 538 aaKnown RBP10.14□□□□□ -0.79
PBRM1-216ENST00000449505 TNS3Q68CZ2 1445 aa10.14□□□□□ -0.79
PBRM1-216ENST00000449505 USP32Q8NFA0 1604 aa10.14□□□□□ -0.79
PBRM1-216ENST00000449505 FOXO3O43524 673 aa10.13□□□□□ -0.79
PBRM1-216ENST00000449505 TMEM132EQ6IEE7 984 aa10.13□□□□□ -0.79
PBRM1-216ENST00000449505 WAPLQ7Z5K2 1190 aa10.13□□□□□ -0.79
PBRM1-216ENST00000449505 FNBP4Q8N3X1 1017 aaPredicted RBP10.13□□□□□ -0.79
PBRM1-216ENST00000449505 ATRNO75882 1429 aa10.13□□□□□ -0.79
PBRM1-216ENST00000449505 ARHGEF10O15013 1369 aa10.13□□□□□ -0.79
PBRM1-216ENST00000449505 PLEKHH1Q9ULM0 1364 aa10.13□□□□□ -0.79
PBRM1-216ENST00000449505 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
PBRM1-216ENST00000449505 PSME1Q06323 249 aa10.12□□□□□ -0.79
PBRM1-216ENST00000449505 ADGRB1O14514 1584 aa10.11□□□□□ -0.79
PBRM1-216ENST00000449505 NUTM2FA1L443 756 aa10.11□□□□□ -0.79
PBRM1-216ENST00000449505 POGKQ9P215 609 aa10.11□□□□□ -0.79
PBRM1-216ENST00000449505 PHF8Q9UPP1 1060 aa10.11□□□□□ -0.79
PBRM1-216ENST00000449505 SBNO1A3KN83 1393 aa10.11□□□□□ -0.79
PBRM1-216ENST00000449505 SPATA31A3Q5VYP0 1347 aa10.1□□□□□ -0.79
PBRM1-216ENST00000449505 HRCP23327 699 aa10.1□□□□□ -0.79
PBRM1-216ENST00000449505 XPCQ01831 940 aaPredicted RBP10.1□□□□□ -0.79
PBRM1-216ENST00000449505 CFAP70Q5T0N1 1121 aa10.1□□□□□ -0.79
PBRM1-216ENST00000449505 PRAM1Q96QH2 718 aa10.1□□□□□ -0.79
PBRM1-216ENST00000449505 TULP4Q9NRJ4 1543 aa10.1□□□□□ -0.79
PBRM1-216ENST00000449505 ITSN1Q15811 1721 aa10.1□□□□□ -0.79
PBRM1-216ENST00000449505 NWD2Q9ULI1 1742 aa10.1□□□□□ -0.79
PBRM1-216ENST00000449505 ABCA3Q99758 1704 aa10.09□□□□□ -0.79
PBRM1-216ENST00000449505 BCL9LQ86UU0 1499 aa10.09□□□□□ -0.79
PBRM1-216ENST00000449505 SLIT2O94813 1529 aa10.08□□□□□ -0.8
PBRM1-216ENST00000449505 KRT28Q7Z3Y7 464 aa10.08□□□□□ -0.8
PBRM1-216ENST00000449505 GPRASP1Q5JY77 1395 aa10.08□□□□□ -0.8
PBRM1-216ENST00000449505 PLCH1Q4KWH8 1693 aa10.08□□□□□ -0.8
PBRM1-216ENST00000449505 RGPD8O14715 1765 aaPredicted RBP10.08□□□□□ -0.8
PBRM1-216ENST00000449505 EP400Q96L91 3159 aa10.07□□□□□ -0.8
PBRM1-216ENST00000449505 CCDC125Q86Z20 511 aa10.07□□□□□ -0.8
PBRM1-216ENST00000449505 UNC5CLQ8IV45 518 aa10.07□□□□□ -0.8
PBRM1-216ENST00000449505 ARHGEF28Q8N1W1 1705 aaKnown RBP10.07□□□□□ -0.8
PBRM1-216ENST00000449505 RALGAPBQ86X10 1494 aa10.06□□□□□ -0.8
PBRM1-216ENST00000449505 SAFB2Q14151 953 aaKnown RBP eCLIP10.06□□□□□ -0.8
PBRM1-216ENST00000449505 DCAF11Q8TEB1 546 aa10.06□□□□□ -0.8
PBRM1-216ENST00000449505 GJD4Q96KN9 370 aaPredicted RBP10.06□□□□□ -0.8
PBRM1-216ENST00000449505 KIAA1210Q9ULL0 1709 aa10.06□□□□□ -0.8
PBRM1-216ENST00000449505 TRPM3Q9HCF6 1732 aaPredicted RBP10.05□□□□□ -0.8
PBRM1-216ENST00000449505 LMOD2Q6P5Q4 547 aa10.05□□□□□ -0.8
PBRM1-216ENST00000449505 TRAK1Q9UPV9 953 aa10.05□□□□□ -0.8
PBRM1-216ENST00000449505 GLI3P10071 1580 aa10.05□□□□□ -0.8
PBRM1-216ENST00000449505 ALS2Q96Q42 1657 aa10.04□□□□□ -0.8
PBRM1-216ENST00000449505 ATP7BP35670 1465 aa10.04□□□□□ -0.8
PBRM1-216ENST00000449505 COL14A1Q05707 1796 aaKnown RBP10.03□□□□□ -0.8
PBRM1-216ENST00000449505 BLMP54132 1417 aaPredicted RBP10.03□□□□□ -0.8
PBRM1-216ENST00000449505 KDM2AQ9Y2K7 1162 aa10.03□□□□□ -0.8
PBRM1-216ENST00000449505 MINK1Q8N4C8 1332 aaPredicted RBP10.03□□□□□ -0.8
PBRM1-216ENST00000449505 WASLO00401 505 aaPredicted RBP10.02□□□□□ -0.81
PBRM1-216ENST00000449505 VPS72Q15906 364 aa10.02□□□□□ -0.81
PBRM1-216ENST00000449505 NGDNQ8NEJ9 315 aaKnown RBP10.02□□□□□ -0.81
PBRM1-216ENST00000449505 CCDC9Q9Y3X0 531 aaKnown RBP10.02□□□□□ -0.81
PBRM1-216ENST00000449505 NRAPQ86VF7 1730 aa10.02□□□□□ -0.81
PBRM1-216ENST00000449505 SF3B2Q13435 895 aaKnown RBP10.01□□□□□ -0.81
PBRM1-216ENST00000449505 PMFBP1Q8TBY8 1022 aa10.01□□□□□ -0.81
PBRM1-216ENST00000449505 HIRIP3Q9BW71 556 aaPredicted RBP10.01□□□□□ -0.81
PBRM1-216ENST00000449505 TOPAZ1Q8N9V7 1692 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms