RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 PROM2Q8N271 834 aa15.45■□□□□ 0.06
LINC02561-201ENST00000449457 IQGAP3Q86VI3 1631 aa15.45■□□□□ 0.06
LINC02561-201ENST00000449457 METP08581 1390 aa15.45■□□□□ 0.06
LINC02561-201ENST00000449457 SETD5Q9C0A6 1442 aa15.44■□□□□ 0.06
LINC02561-201ENST00000449457 SETBP1Q9Y6X0 1596 aa15.44■□□□□ 0.06
LINC02561-201ENST00000449457 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.43■□□□□ 0.06
LINC02561-201ENST00000449457 QTRT2Q9H974 415 aaKnown RBP15.43■□□□□ 0.06
LINC02561-201ENST00000449457 RTN4Q9NQC3 1192 aaKnown RBP15.42■□□□□ 0.06
LINC02561-201ENST00000449457 PIK3R4Q99570 1358 aa15.41■□□□□ 0.06
LINC02561-201ENST00000449457 ITGAEP38570 1179 aa15.41■□□□□ 0.06
LINC02561-201ENST00000449457 DCCP43146 1447 aa15.41■□□□□ 0.06
LINC02561-201ENST00000449457 SPHKAPQ2M3C7 1700 aa15.4■□□□□ 0.06
LINC02561-201ENST00000449457 HDGFP51858 240 aaKnown RBP15.39■□□□□ 0.05
LINC02561-201ENST00000449457 RBM6P78332 1123 aaKnown RBP15.39■□□□□ 0.05
LINC02561-201ENST00000449457 ADGRL3Q9HAR2 1447 aa15.39■□□□□ 0.05
LINC02561-201ENST00000449457 ZNF326Q5BKZ1 582 aaKnown RBP15.38■□□□□ 0.05
LINC02561-201ENST00000449457 CLTCL1P53675 1640 aa15.38■□□□□ 0.05
LINC02561-201ENST00000449457 NUP155O75694 1391 aa15.37■□□□□ 0.05
LINC02561-201ENST00000449457 NGLY1Q96IV0 654 aa15.37■□□□□ 0.05
LINC02561-201ENST00000449457 C1orf167Q5SNV9 1468 aa15.36■□□□□ 0.05
LINC02561-201ENST00000449457 ORAI2Q96SN7 254 aa15.36■□□□□ 0.05
LINC02561-201ENST00000449457 NEXMIFQ5QGS0 1516 aa15.36■□□□□ 0.05
LINC02561-201ENST00000449457 AMER1Q5JTC6 1135 aaPredicted RBP15.35■□□□□ 0.05
LINC02561-201ENST00000449457 PPARGC1BQ86YN6 1023 aaKnown RBP15.35■□□□□ 0.05
LINC02561-201ENST00000449457 LRRC59Q96AG4 307 aaKnown RBP15.35■□□□□ 0.05
LINC02561-201ENST00000449457 FBXO3Q9UK99 471 aa15.35■□□□□ 0.05
LINC02561-201ENST00000449457 USP21Q9UK80 565 aa15.34■□□□□ 0.05
LINC02561-201ENST00000449457 XPCQ01831 940 aaPredicted RBP15.33■□□□□ 0.04
LINC02561-201ENST00000449457 ATAD2Q6PL18 1390 aa15.33■□□□□ 0.04
LINC02561-201ENST00000449457 ROBO2Q9HCK4 1378 aa15.32■□□□□ 0.04
LINC02561-201ENST00000449457 ZNF692Q9BU19 519 aaPredicted RBP15.31■□□□□ 0.04
LINC02561-201ENST00000449457 ATRNO75882 1429 aa15.31■□□□□ 0.04
LINC02561-201ENST00000449457 LAMC1P11047 1609 aa15.29■□□□□ 0.04
LINC02561-201ENST00000449457 NUTM2FA1L443 756 aa15.28■□□□□ 0.04
LINC02561-201ENST00000449457 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
LINC02561-201ENST00000449457 COL22A1Q8NFW1 1626 aaPredicted RBP15.28■□□□□ 0.04
LINC02561-201ENST00000449457 SOS2Q07890 1332 aaPredicted RBP15.27■□□□□ 0.04
LINC02561-201ENST00000449457 MYOM2P54296 1465 aa15.27■□□□□ 0.03
LINC02561-201ENST00000449457 ROCK1Q13464 1354 aa15.26■□□□□ 0.03
LINC02561-201ENST00000449457 SPDYE2BA6NHP3 402 aa15.26■□□□□ 0.03
LINC02561-201ENST00000449457 SPDYE6P0CI01 402 aa15.26■□□□□ 0.03
LINC02561-201ENST00000449457 SPDYE2Q495Y8 402 aa15.26■□□□□ 0.03
LINC02561-201ENST00000449457 TRPC5Q9UL62 973 aaPredicted RBP15.26■□□□□ 0.03
LINC02561-201ENST00000449457 MARF1Q9Y4F3 1742 aaKnown RBP15.26■□□□□ 0.03
LINC02561-201ENST00000449457 ZRANB1Q9UGI0 708 aa15.25■□□□□ 0.03
LINC02561-201ENST00000449457 BCL9LQ86UU0 1499 aa15.25■□□□□ 0.03
LINC02561-201ENST00000449457 PTCH1Q13635 1447 aa15.25■□□□□ 0.03
LINC02561-201ENST00000449457 KIF1BO60333 1816 aa15.24■□□□□ 0.03
LINC02561-201ENST00000449457 BRWD3Q6RI45 1802 aa15.24■□□□□ 0.03
LINC02561-201ENST00000449457 GLI3P10071 1580 aa15.24■□□□□ 0.03
LINC02561-201ENST00000449457 DEFB132Q7Z7B7 95 aa15.24■□□□□ 0.03
LINC02561-201ENST00000449457 PXDNQ92626 1479 aa15.23■□□□□ 0.03
LINC02561-201ENST00000449457 FNBP4Q8N3X1 1017 aaPredicted RBP15.22■□□□□ 0.03
LINC02561-201ENST00000449457 SSUH2Q9Y2M2 353 aa15.21■□□□□ 0.03
LINC02561-201ENST00000449457 ESCO1Q5FWF5 840 aa15.2■□□□□ 0.02
LINC02561-201ENST00000449457 RALGAPBQ86X10 1494 aa15.2■□□□□ 0.02
LINC02561-201ENST00000449457 FOXO3O43524 673 aa15.19■□□□□ 0.02
LINC02561-201ENST00000449457 PPLO60437 1756 aa15.19■□□□□ 0.02
LINC02561-201ENST00000449457 VASPP50552 380 aaPredicted RBP15.18■□□□□ 0.02
LINC02561-201ENST00000449457 PLEKHH1Q9ULM0 1364 aa15.18■□□□□ 0.02
LINC02561-201ENST00000449457 CDC42BPGQ6DT37 1551 aa15.18■□□□□ 0.02
LINC02561-201ENST00000449457 GJD4Q96KN9 370 aaPredicted RBP15.17■□□□□ 0.02
LINC02561-201ENST00000449457 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.17■□□□□ 0.02
LINC02561-201ENST00000449457 NAIPQ13075 1403 aa15.17■□□□□ 0.02
LINC02561-201ENST00000449457 PSDA5PKW4 1024 aaPredicted RBP15.16■□□□□ 0.02
LINC02561-201ENST00000449457 WAPLQ7Z5K2 1190 aa15.16■□□□□ 0.02
LINC02561-201ENST00000449457 STK26Q9P289 416 aa15.16■□□□□ 0.02
LINC02561-201ENST00000449457 USP32Q8NFA0 1604 aa15.16■□□□□ 0.02
LINC02561-201ENST00000449457 PLCH1Q4KWH8 1693 aa15.15■□□□□ 0.02
LINC02561-201ENST00000449457 CABLES1Q8TDN4 633 aa15.14■□□□□ 0.01
LINC02561-201ENST00000449457 NPHP3Q7Z494 1330 aa15.14■□□□□ 0.01
LINC02561-201ENST00000449457 SLIT2O94813 1529 aa15.13■□□□□ 0.01
LINC02561-201ENST00000449457 HFM1A2PYH4 1435 aa15.13■□□□□ 0.01
LINC02561-201ENST00000449457 BLMP54132 1417 aaPredicted RBP15.13■□□□□ 0.01
LINC02561-201ENST00000449457 RGPD8O14715 1765 aaPredicted RBP15.13■□□□□ 0.01
LINC02561-201ENST00000449457 ABCA3Q99758 1704 aa15.12■□□□□ 0.01
LINC02561-201ENST00000449457 ADGRF5Q8IZF2 1346 aa15.12■□□□□ 0.01
LINC02561-201ENST00000449457 FMN2Q9NZ56 1722 aa15.12■□□□□ 0.01
LINC02561-201ENST00000449457 PRAG1Q86YV5 1406 aa15.11■□□□□ 0.01
LINC02561-201ENST00000449457 LRP5O75197 1615 aa15.1■□□□□ 0.01
LINC02561-201ENST00000449457 FAM182BQ5T319 152 aa15.1■□□□□ 0.01
LINC02561-201ENST00000449457 TMEM132EQ6IEE7 984 aa15.1■□□□□ 0.01
LINC02561-201ENST00000449457 UNC5CLQ8IV45 518 aa15.1■□□□□ 0.01
LINC02561-201ENST00000449457 SEPT12Q8IYM1 358 aa15.09■□□□□ 0.01
LINC02561-201ENST00000449457 CCDC9Q9Y3X0 531 aaKnown RBP15.09■□□□□ 0.01
LINC02561-201ENST00000449457 IFT172Q9UG01 1749 aa15.09■□□□□ 0.01
LINC02561-201ENST00000449457 A0A0G2JS52 829 aa15.07■□□□□ 0
LINC02561-201ENST00000449457 VGFO15240 615 aaPredicted RBP15.07■□□□□ 0
LINC02561-201ENST00000449457 MYT1Q01538 1121 aa15.07■□□□□ 0
LINC02561-201ENST00000449457 SPATA31A3Q5VYP0 1347 aa15.07■□□□□ 0
LINC02561-201ENST00000449457 KNDC1Q76NI1 1749 aa15.06■□□□□ 0
LINC02561-201ENST00000449457 RGL3Q3MIN7 710 aa15.06■□□□□ 0
LINC02561-201ENST00000449457 RRBP1Q9P2E9 1410 aaKnown RBP15.06■□□□□ 0
LINC02561-201ENST00000449457 KIF1AQ12756 1690 aa15.06■□□□□ 0
LINC02561-201ENST00000449457 HAP1P54257 671 aaPredicted RBP15.05■□□□□ -0
LINC02561-201ENST00000449457 SAFB2Q14151 953 aaKnown RBP eCLIP15.05■□□□□ -0
LINC02561-201ENST00000449457 LMOD2Q6P5Q4 547 aa15.05■□□□□ -0
LINC02561-201ENST00000449457 CCDC125Q86Z20 511 aa15.05■□□□□ -0
LINC02561-201ENST00000449457 TNS3Q68CZ2 1445 aa15.05■□□□□ -0
LINC02561-201ENST00000449457 NRAPQ86VF7 1730 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms