RNA–Protein interactions for RNA: ENST00000449337.6

RORA-204, Transcript of RAR related orphan receptor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RORA, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-204ENST00000449337 KNDC1Q76NI1 1749 aa29.23■■■□□ 2.27
RORA-204ENST00000449337 CDC42BPGQ6DT37 1551 aa29.22■■■□□ 2.27
RORA-204ENST00000449337 PLEKHH1Q9ULM0 1364 aa29.21■■■□□ 2.27
RORA-204ENST00000449337 NRXN1Q9ULB1 1477 aa29.2■■■□□ 2.27
RORA-204ENST00000449337 PNPLA6Q8IY17 1366 aa29.2■■■□□ 2.27
RORA-204ENST00000449337 ABCC11Q96J66 1382 aa29.2■■■□□ 2.27
RORA-204ENST00000449337 YTHDC2Q9H6S0 1430 aaKnown RBP29.19■■■□□ 2.26
RORA-204ENST00000449337 MYOM2P54296 1465 aa29.19■■■□□ 2.26
RORA-204ENST00000449337 C14orf93Q9H972 538 aaKnown RBP29.17■■■□□ 2.26
RORA-204ENST00000449337 CFAP70Q5T0N1 1121 aa29.16■■■□□ 2.26
RORA-204ENST00000449337 SOS2Q07890 1332 aaPredicted RBP29.15■■■□□ 2.26
RORA-204ENST00000449337 ZNF772Q68DY9 489 aaPredicted RBP29.14■■■□□ 2.25
RORA-204ENST00000449337 NUTM2FA1L443 756 aa29.12■■■□□ 2.25
RORA-204ENST00000449337 ESCO1Q5FWF5 840 aa29.12■■■□□ 2.25
RORA-204ENST00000449337 AFF2P51816 1311 aa29.1■■■□□ 2.25
RORA-204ENST00000449337 FMN2Q9NZ56 1722 aa29.09■■■□□ 2.25
RORA-204ENST00000449337 HRCP23327 699 aa29.07■■■□□ 2.24
RORA-204ENST00000449337 C8orf37Q96NL8 207 aa29.07■■■□□ 2.24
RORA-204ENST00000449337 DHX57Q6P158 1386 aaKnown RBP29.07■■■□□ 2.24
RORA-204ENST00000449337 PXDNQ92626 1479 aa29.06■■■□□ 2.24
RORA-204ENST00000449337 XPCQ01831 940 aaPredicted RBP29.06■■■□□ 2.24
RORA-204ENST00000449337 FOXO3O43524 673 aa29.05■■■□□ 2.24
RORA-204ENST00000449337 ADAMTS2O95450 1211 aa29.04■■■□□ 2.24
RORA-204ENST00000449337 SIRT1Q96EB6 747 aa29.04■■■□□ 2.24
RORA-204ENST00000449337 NPHP3Q7Z494 1330 aa29.04■■■□□ 2.24
RORA-204ENST00000449337 RGPD8O14715 1765 aaPredicted RBP29.03■■■□□ 2.24
RORA-204ENST00000449337 KDM2AQ9Y2K7 1162 aa29.03■■■□□ 2.24
RORA-204ENST00000449337 COL22A1Q8NFW1 1626 aaPredicted RBP29.02■■■□□ 2.24
RORA-204ENST00000449337 ADGRB1O14514 1584 aa29.02■■■□□ 2.24
RORA-204ENST00000449337 SAFB2Q14151 953 aaKnown RBP eCLIP29.02■■■□□ 2.24
RORA-204ENST00000449337 DCAF11Q8TEB1 546 aa29.01■■■□□ 2.23
RORA-204ENST00000449337 PRAM1Q96QH2 718 aa29.01■■■□□ 2.23
RORA-204ENST00000449337 RXRBP28702 533 aa29■■■□□ 2.23
RORA-204ENST00000449337 DLC1Q96QB1 1528 aa28.98■■■□□ 2.23
RORA-204ENST00000449337 NGLY1Q96IV0 654 aa28.97■■■□□ 2.23
RORA-204ENST00000449337 KIF1AQ12756 1690 aa28.96■■■□□ 2.23
RORA-204ENST00000449337 QTRT2Q9H974 415 aaKnown RBP28.94■■■□□ 2.22
RORA-204ENST00000449337 POGKQ9P215 609 aa28.93■■■□□ 2.22
RORA-204ENST00000449337 TRAK1Q9UPV9 953 aa28.93■■■□□ 2.22
RORA-204ENST00000449337 CDK12Q9NYV4 1490 aaPredicted RBP28.91■■■□□ 2.22
RORA-204ENST00000449337 USP32Q8NFA0 1604 aa28.9■■■□□ 2.22
RORA-204ENST00000449337 MARF1Q9Y4F3 1742 aaKnown RBP28.89■■■□□ 2.22
RORA-204ENST00000449337 ADGRB2O60241 1585 aa28.89■■■□□ 2.22
RORA-204ENST00000449337 PHF8Q9UPP1 1060 aa28.89■■■□□ 2.21
RORA-204ENST00000449337 KRT28Q7Z3Y7 464 aa28.87■■■□□ 2.21
RORA-204ENST00000449337 HIRIP3Q9BW71 556 aaPredicted RBP28.87■■■□□ 2.21
RORA-204ENST00000449337 SPATA31A3Q5VYP0 1347 aa28.87■■■□□ 2.21
RORA-204ENST00000449337 RGS12O14924 1447 aa28.87■■■□□ 2.21
RORA-204ENST00000449337 RBM6P78332 1123 aaKnown RBP28.86■■■□□ 2.21
RORA-204ENST00000449337 USP21Q9UK80 565 aa28.86■■■□□ 2.21
RORA-204ENST00000449337 FNBP4Q8N3X1 1017 aaPredicted RBP28.86■■■□□ 2.21
RORA-204ENST00000449337 STAC3Q96MF2 364 aa28.86■■■□□ 2.21
RORA-204ENST00000449337 MINK1Q8N4C8 1332 aaPredicted RBP28.85■■■□□ 2.21
RORA-204ENST00000449337 UPF1Q92900 1129 aaKnown RBP eCLIP28.83■■■□□ 2.21
RORA-204ENST00000449337 ARHGEF28Q8N1W1 1705 aaKnown RBP28.82■■■□□ 2.2
RORA-204ENST00000449337 ANKARQ7Z5J8 1434 aa28.81■■■□□ 2.2
RORA-204ENST00000449337 PMFBP1Q8TBY8 1022 aa28.8■■■□□ 2.2
RORA-204ENST00000449337 TNS3Q68CZ2 1445 aa28.79■■■□□ 2.2
RORA-204ENST00000449337 BCL9LQ86UU0 1499 aa28.79■■■□□ 2.2
RORA-204ENST00000449337 PRR36Q9H6K5 1346 aa28.78■■■□□ 2.2
RORA-204ENST00000449337 TRPC5Q9UL62 973 aaPredicted RBP28.78■■■□□ 2.2
RORA-204ENST00000449337 ATRNO75882 1429 aa28.78■■■□□ 2.2
RORA-204ENST00000449337 TULP4Q9NRJ4 1543 aa28.76■■■□□ 2.19
RORA-204ENST00000449337 PSME1Q06323 249 aa28.76■■■□□ 2.19
RORA-204ENST00000449337 PLEKHG5O94827 1062 aa28.75■■■□□ 2.19
RORA-204ENST00000449337 WASLO00401 505 aaPredicted RBP28.74■■■□□ 2.19
RORA-204ENST00000449337 CABLES1Q8TDN4 633 aa28.74■■■□□ 2.19
RORA-204ENST00000449337 SBNO1A3KN83 1393 aa28.74■■■□□ 2.19
RORA-204ENST00000449337 ABCA3Q99758 1704 aa28.74■■■□□ 2.19
RORA-204ENST00000449337 KIAA1210Q9ULL0 1709 aa28.74■■■□□ 2.19
RORA-204ENST00000449337 TRPM3Q9HCF6 1732 aaPredicted RBP28.73■■■□□ 2.19
RORA-204ENST00000449337 LMOD2Q6P5Q4 547 aa28.72■■■□□ 2.19
RORA-204ENST00000449337 EIF3AQ14152 1382 aaKnown RBP28.7■■■□□ 2.19
RORA-204ENST00000449337 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.7■■■□□ 2.19
RORA-204ENST00000449337 SLIT2O94813 1529 aa28.7■■■□□ 2.18
RORA-204ENST00000449337 NBPF1Q3BBV0 1214 aa28.69■■■□□ 2.18
RORA-204ENST00000449337 ARHGEF10O15013 1369 aa28.68■■■□□ 2.18
RORA-204ENST00000449337 HAP1P54257 671 aaPredicted RBP28.67■■■□□ 2.18
RORA-204ENST00000449337 ALS2Q96Q42 1657 aa28.67■■■□□ 2.18
RORA-204ENST00000449337 ATP7BP35670 1465 aa28.66■■■□□ 2.18
RORA-204ENST00000449337 ITSN1Q15811 1721 aa28.64■■■□□ 2.18
RORA-204ENST00000449337 PLCH1Q4KWH8 1693 aa28.64■■■□□ 2.18
RORA-204ENST00000449337 UNC5CLQ8IV45 518 aa28.64■■■□□ 2.18
RORA-204ENST00000449337 GJD4Q96KN9 370 aaPredicted RBP28.64■■■□□ 2.18
RORA-204ENST00000449337 GPRASP1Q5JY77 1395 aa28.64■■■□□ 2.17
RORA-204ENST00000449337 EP400Q96L91 3159 aa28.63■■■□□ 2.17
RORA-204ENST00000449337 NUDT16Q96DE0 195 aaKnown RBP28.63■■■□□ 2.17
RORA-204ENST00000449337 GLI3P10071 1580 aa28.62■■■□□ 2.17
RORA-204ENST00000449337 NGDNQ8NEJ9 315 aaKnown RBP28.62■■■□□ 2.17
RORA-204ENST00000449337 SIN3AQ96ST3 1273 aa28.62■■■□□ 2.17
RORA-204ENST00000449337 CDK19Q9BWU1 502 aa28.61■■■□□ 2.17
RORA-204ENST00000449337 RALGAPBQ86X10 1494 aa28.6■■■□□ 2.17
RORA-204ENST00000449337 L3MBTL2Q969R5 705 aa28.6■■■□□ 2.17
RORA-204ENST00000449337 ATAD2Q6PL18 1390 aa28.59■■■□□ 2.17
RORA-204ENST00000449337 NWD2Q9ULI1 1742 aa28.58■■■□□ 2.17
RORA-204ENST00000449337 TOPAZ1Q8N9V7 1692 aa28.58■■■□□ 2.17
RORA-204ENST00000449337 CRYBG1Q9Y4K1 1723 aa28.57■■■□□ 2.16
RORA-204ENST00000449337 FAM83GA6ND36 823 aa28.56■■■□□ 2.16
RORA-204ENST00000449337 PAK3O75914 559 aaPredicted RBP28.55■■■□□ 2.16
RORA-204ENST00000449337 NEUROD1Q13562 356 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms