RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 CENPQQ7L2Z9 268 aaPredicted RBP15.02■□□□□ -0
RFX3-208ENST00000449234 ZFYVE9O95405 1425 aa15.01□□□□□ -0.01
RFX3-208ENST00000449234 NINLQ9Y2I6 1382 aa15.01□□□□□ -0.01
RFX3-208ENST00000449234 VGFO15240 615 aaPredicted RBP15.01□□□□□ -0.01
RFX3-208ENST00000449234 CRBNQ96SW2 442 aa15.01□□□□□ -0.01
RFX3-208ENST00000449234 NOS1P29475 1434 aa15□□□□□ -0.01
RFX3-208ENST00000449234 HECW2Q9P2P5 1572 aa15□□□□□ -0.01
RFX3-208ENST00000449234 CARD14Q9BXL6 1004 aa15□□□□□ -0.01
RFX3-208ENST00000449234 PPLO60437 1756 aa15□□□□□ -0.01
RFX3-208ENST00000449234 NPATQ14207 1427 aa15□□□□□ -0.01
RFX3-208ENST00000449234 NSD2O96028 1365 aa14.99□□□□□ -0.01
RFX3-208ENST00000449234 USP32Q8NFA0 1604 aa14.99□□□□□ -0.01
RFX3-208ENST00000449234 NKTRP30414 1462 aaKnown RBP14.98□□□□□ -0.01
RFX3-208ENST00000449234 PDE3AQ14432 1141 aa14.98□□□□□ -0.01
RFX3-208ENST00000449234 KDM2BQ8NHM5 1336 aa14.97□□□□□ -0.01
RFX3-208ENST00000449234 MROH2AA6NES4 1674 aa14.97□□□□□ -0.01
RFX3-208ENST00000449234 DDRGK1Q96HY6 314 aa14.97□□□□□ -0.01
RFX3-208ENST00000449234 ADGRB1O14514 1584 aa14.97□□□□□ -0.01
RFX3-208ENST00000449234 FRMPD1Q5SYB0 1578 aa14.97□□□□□ -0.01
RFX3-208ENST00000449234 ABCC3O15438 1527 aa14.97□□□□□ -0.01
RFX3-208ENST00000449234 SLC52A1Q9NWF4 448 aa14.96□□□□□ -0.01
RFX3-208ENST00000449234 UGGT1Q9NYU2 1555 aa14.96□□□□□ -0.01
RFX3-208ENST00000449234 SENP3-EIF4A1A0A087X0R7 540 aa14.95□□□□□ -0.02
RFX3-208ENST00000449234 CCDC27Q2M243 656 aa14.95□□□□□ -0.02
RFX3-208ENST00000449234 MORC1Q86VD1 984 aa14.95□□□□□ -0.02
RFX3-208ENST00000449234 WDR63Q8IWG1 891 aa14.95□□□□□ -0.02
RFX3-208ENST00000449234 CGNL1Q0VF96 1302 aa14.94□□□□□ -0.02
RFX3-208ENST00000449234 EVC2Q86UK5 1308 aa14.94□□□□□ -0.02
RFX3-208ENST00000449234 ZC3H13Q5T200 1668 aaKnown RBP14.94□□□□□ -0.02
RFX3-208ENST00000449234 APAF1O14727 1248 aa14.94□□□□□ -0.02
RFX3-208ENST00000449234 PLIN1O60240 522 aa14.94□□□□□ -0.02
RFX3-208ENST00000449234 RUNDC1Q96C34 613 aa14.94□□□□□ -0.02
RFX3-208ENST00000449234 CFAP53Q96M91 514 aa14.94□□□□□ -0.02
RFX3-208ENST00000449234 PIK3C2BO00750 1634 aa14.94□□□□□ -0.02
RFX3-208ENST00000449234 GGT6Q6P531 493 aa14.92□□□□□ -0.02
RFX3-208ENST00000449234 USP35Q9P2H5 1018 aa14.92□□□□□ -0.02
RFX3-208ENST00000449234 CHGAP10645 457 aaKnown RBP14.91□□□□□ -0.02
RFX3-208ENST00000449234 RBM42Q9BTD8 480 aaKnown RBP14.91□□□□□ -0.02
RFX3-208ENST00000449234 CAMSAP1Q5T5Y3 1602 aa14.91□□□□□ -0.02
RFX3-208ENST00000449234 QRICH2Q9H0J4 1663 aa14.9□□□□□ -0.02
RFX3-208ENST00000449234 ANKRD36BQ8N2N9 1353 aa14.9□□□□□ -0.02
RFX3-208ENST00000449234 PPM1GO15355 546 aaPredicted RBP14.9□□□□□ -0.02
RFX3-208ENST00000449234 NSD3Q9BZ95 1437 aa14.9□□□□□ -0.02
RFX3-208ENST00000449234 PAK3O75914 559 aaPredicted RBP14.89□□□□□ -0.03
RFX3-208ENST00000449234 CT47B1P0C2W7 299 aaPredicted RBP14.89□□□□□ -0.03
RFX3-208ENST00000449234 WWC1Q8IX03 1113 aa14.89□□□□□ -0.03
RFX3-208ENST00000449234 TRAK1Q9UPV9 953 aa14.89□□□□□ -0.03
RFX3-208ENST00000449234 C20orf194Q5TEA3 1177 aa14.88□□□□□ -0.03
RFX3-208ENST00000449234 NEXMIFQ5QGS0 1516 aa14.87□□□□□ -0.03
RFX3-208ENST00000449234 FAM161AQ3B820 660 aa14.87□□□□□ -0.03
RFX3-208ENST00000449234 SLC12A5Q9H2X9 1139 aa14.87□□□□□ -0.03
RFX3-208ENST00000449234 ZMYM3Q14202 1370 aa14.86□□□□□ -0.03
RFX3-208ENST00000449234 GLI2P10070 1586 aa14.86□□□□□ -0.03
RFX3-208ENST00000449234 DIP2CQ9Y2E4 1556 aa14.86□□□□□ -0.03
RFX3-208ENST00000449234 CCDC146Q8IYE0 955 aa14.86□□□□□ -0.03
RFX3-208ENST00000449234 MED14O60244 1454 aa14.85□□□□□ -0.03
RFX3-208ENST00000449234 RTL5Q5HYW3 569 aaPredicted RBP14.84□□□□□ -0.03
RFX3-208ENST00000449234 PNNQ9H307 717 aaKnown RBP14.84□□□□□ -0.03
RFX3-208ENST00000449234 ATAD2Q6PL18 1390 aa14.84□□□□□ -0.03
RFX3-208ENST00000449234 SHPRHQ149N8 1683 aa14.84□□□□□ -0.03
RFX3-208ENST00000449234 MYH16Q9H6N6 1097 aa14.83□□□□□ -0.04
RFX3-208ENST00000449234 IQSEC2Q5JU85 1478 aa14.82□□□□□ -0.04
RFX3-208ENST00000449234 MTHFSP49914 203 aa14.82□□□□□ -0.04
RFX3-208ENST00000449234 IDI1Q13907 227 aa14.82□□□□□ -0.04
RFX3-208ENST00000449234 TCP11L2Q8N4U5 519 aa14.82□□□□□ -0.04
RFX3-208ENST00000449234 PMFBP1Q8TBY8 1022 aa14.82□□□□□ -0.04
RFX3-208ENST00000449234 ARHGEF28Q8N1W1 1705 aaKnown RBP14.82□□□□□ -0.04
RFX3-208ENST00000449234 MAPK8IP3Q9UPT6 1336 aa14.82□□□□□ -0.04
RFX3-208ENST00000449234 RICTORQ6R327 1708 aa14.81□□□□□ -0.04
RFX3-208ENST00000449234 TMEM132EQ6IEE7 984 aa14.81□□□□□ -0.04
RFX3-208ENST00000449234 TERF2IPQ9NYB0 399 aa14.81□□□□□ -0.04
RFX3-208ENST00000449234 SIGLEC1Q9BZZ2 1709 aa14.8□□□□□ -0.04
RFX3-208ENST00000449234 IL16Q14005 1332 aa14.8□□□□□ -0.04
RFX3-208ENST00000449234 ABCC11Q96J66 1382 aa14.8□□□□□ -0.04
RFX3-208ENST00000449234 TULP4Q9NRJ4 1543 aa14.8□□□□□ -0.04
RFX3-208ENST00000449234 BCAR3O75815 825 aa14.79□□□□□ -0.04
RFX3-208ENST00000449234 RARSP54136 660 aaKnown RBP14.79□□□□□ -0.04
RFX3-208ENST00000449234 CLUAP1Q96AJ1 413 aa14.79□□□□□ -0.04
RFX3-208ENST00000449234 REREQ9P2R6 1566 aa14.78□□□□□ -0.04
RFX3-208ENST00000449234 RAPGEF3O95398 923 aa14.78□□□□□ -0.04
RFX3-208ENST00000449234 DEKP35659 375 aaKnown RBP14.78□□□□□ -0.04
RFX3-208ENST00000449234 NPM2Q86SE8 214 aaKnown RBP14.77□□□□□ -0.05
RFX3-208ENST00000449234 CLTCQ00610 1675 aaKnown RBP14.77□□□□□ -0.05
RFX3-208ENST00000449234 TMEM131LA2VDJ0 1609 aa14.77□□□□□ -0.05
RFX3-208ENST00000449234 AGLP35573 1532 aa14.76□□□□□ -0.05
RFX3-208ENST00000449234 C8orf34Q49A92 452 aa14.76□□□□□ -0.05
RFX3-208ENST00000449234 ADGRB2O60241 1585 aa14.76□□□□□ -0.05
RFX3-208ENST00000449234 PREX1Q8TCU6 1659 aa14.75□□□□□ -0.05
RFX3-208ENST00000449234 CFAP65Q6ZU64 1925 aaKnown RBP14.75□□□□□ -0.05
RFX3-208ENST00000449234 CANXP27824 592 aaKnown RBP14.75□□□□□ -0.05
RFX3-208ENST00000449234 HDGFL2Q7Z4V5 671 aaPredicted RBP14.75□□□□□ -0.05
RFX3-208ENST00000449234 DAXXQ9UER7 740 aaPredicted RBP14.75□□□□□ -0.05
RFX3-208ENST00000449234 DLC1Q96QB1 1528 aa14.75□□□□□ -0.05
RFX3-208ENST00000449234 RWDD1Q9H446 243 aaPredicted RBP14.74□□□□□ -0.05
RFX3-208ENST00000449234 PTPRMP28827 1452 aa14.74□□□□□ -0.05
RFX3-208ENST00000449234 YTHDC2Q9H6S0 1430 aaKnown RBP14.74□□□□□ -0.05
RFX3-208ENST00000449234 ZNF428Q96B54 188 aa14.73□□□□□ -0.05
RFX3-208ENST00000449234 SIRT1Q96EB6 747 aa14.73□□□□□ -0.05
RFX3-208ENST00000449234 PNPLA6Q8IY17 1366 aa14.73□□□□□ -0.05
RFX3-208ENST00000449234 ANKRD26Q9UPS8 1709 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms