RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 AHDC1Q5TGY3 1603 aaPredicted RBP15.28■□□□□ 0.04
SMPD4-211ENST00000449159 ABCC11Q96J66 1382 aa15.26■□□□□ 0.03
SMPD4-211ENST00000449159 DLC1Q96QB1 1528 aa15.25■□□□□ 0.03
SMPD4-211ENST00000449159 PLEKHH1Q9ULM0 1364 aa15.24■□□□□ 0.03
SMPD4-211ENST00000449159 RALGAPBQ86X10 1494 aa15.24■□□□□ 0.03
SMPD4-211ENST00000449159 JCADQ9P266 1359 aa15.24■□□□□ 0.03
SMPD4-211ENST00000449159 TRAK1Q9UPV9 953 aa15.23■□□□□ 0.03
SMPD4-211ENST00000449159 NCOA3Q9Y6Q9 1424 aa15.23■□□□□ 0.03
SMPD4-211ENST00000449159 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
SMPD4-211ENST00000449159 ADGRL3Q9HAR2 1447 aa15.22■□□□□ 0.03
SMPD4-211ENST00000449159 ROCK2O75116 1388 aaKnown RBP15.22■□□□□ 0.03
SMPD4-211ENST00000449159 LRP6O75581 1613 aa15.21■□□□□ 0.03
SMPD4-211ENST00000449159 NHSL1Q5SYE7 1610 aa15.21■□□□□ 0.03
SMPD4-211ENST00000449159 C14orf37Q86TY3 774 aa15.21■□□□□ 0.03
SMPD4-211ENST00000449159 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
SMPD4-211ENST00000449159 POTEAQ6S8J7 498 aa15.2■□□□□ 0.02
SMPD4-211ENST00000449159 GPRASP1Q5JY77 1395 aa15.2■□□□□ 0.02
SMPD4-211ENST00000449159 SAFB2Q14151 953 aaKnown RBP eCLIP15.19■□□□□ 0.02
SMPD4-211ENST00000449159 PRAM1Q96QH2 718 aa15.19■□□□□ 0.02
SMPD4-211ENST00000449159 SLAIN2Q9P270 581 aa15.19■□□□□ 0.02
SMPD4-211ENST00000449159 QRICH2Q9H0J4 1663 aa15.19■□□□□ 0.02
SMPD4-211ENST00000449159 CDC42BPGQ6DT37 1551 aa15.18■□□□□ 0.02
SMPD4-211ENST00000449159 DCCP43146 1447 aa15.17■□□□□ 0.02
SMPD4-211ENST00000449159 ADGRB2O60241 1585 aa15.16■□□□□ 0.02
SMPD4-211ENST00000449159 SIRT1Q96EB6 747 aa15.16■□□□□ 0.02
SMPD4-211ENST00000449159 C19orf44Q9H6X5 657 aa15.16■□□□□ 0.02
SMPD4-211ENST00000449159 FMN2Q9NZ56 1722 aa15.16■□□□□ 0.02
SMPD4-211ENST00000449159 SPATA31A6Q5VVP1 1343 aa15.16■□□□□ 0.02
SMPD4-211ENST00000449159 POGKQ9P215 609 aa15.15■□□□□ 0.02
SMPD4-211ENST00000449159 RGPD8O14715 1765 aaPredicted RBP15.14■□□□□ 0.01
SMPD4-211ENST00000449159 CARD11Q9BXL7 1154 aa15.14■□□□□ 0.01
SMPD4-211ENST00000449159 ATF3P18847 181 aa15.13■□□□□ 0.01
SMPD4-211ENST00000449159 MST1RQ04912 1400 aa15.13■□□□□ 0.01
SMPD4-211ENST00000449159 MINK1Q8N4C8 1332 aaPredicted RBP15.13■□□□□ 0.01
SMPD4-211ENST00000449159 CADPS2Q86UW7 1296 aa15.12■□□□□ 0.01
SMPD4-211ENST00000449159 HIRIP3Q9BW71 556 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-211ENST00000449159 USP32Q8NFA0 1604 aa15.11■□□□□ 0.01
SMPD4-211ENST00000449159 CENPJQ9HC77 1338 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-211ENST00000449159 MEX3CQ5U5Q3 659 aaKnown RBP15.1■□□□□ 0.01
SMPD4-211ENST00000449159 EIF3AQ14152 1382 aaKnown RBP15.1■□□□□ 0.01
SMPD4-211ENST00000449159 C1orf167Q5SNV9 1468 aa15.09■□□□□ 0.01
SMPD4-211ENST00000449159 CDK12Q9NYV4 1490 aaPredicted RBP15.09■□□□□ 0.01
SMPD4-211ENST00000449159 TULP4Q9NRJ4 1543 aa15.08■□□□□ 0.01
SMPD4-211ENST00000449159 NUTM2FA1L443 756 aa15.08■□□□□ 0
SMPD4-211ENST00000449159 USP47Q96K76 1375 aa15.08■□□□□ 0
SMPD4-211ENST00000449159 ZNF772Q68DY9 489 aaPredicted RBP15.07■□□□□ 0
SMPD4-211ENST00000449159 TOPAZ1Q8N9V7 1692 aa15.06■□□□□ 0
SMPD4-211ENST00000449159 WASLO00401 505 aaPredicted RBP15.05■□□□□ -0
SMPD4-211ENST00000449159 BRINP3Q76B58 766 aa15.05■□□□□ -0
SMPD4-211ENST00000449159 ITSN1Q15811 1721 aa15.05■□□□□ -0
SMPD4-211ENST00000449159 ATP7BP35670 1465 aa15.04■□□□□ -0
SMPD4-211ENST00000449159 ORAI2Q96SN7 254 aa15.04■□□□□ -0
SMPD4-211ENST00000449159 SBNO2Q9Y2G9 1366 aa15.03■□□□□ -0
SMPD4-211ENST00000449159 PRR36Q9H6K5 1346 aa15.03■□□□□ -0
SMPD4-211ENST00000449159 ST20-MTHFSA0A0A6YYL1 179 aa15.03■□□□□ -0
SMPD4-211ENST00000449159 KIF1AQ12756 1690 aa15.03■□□□□ -0
SMPD4-211ENST00000449159 ANKARQ7Z5J8 1434 aa15.02■□□□□ -0
SMPD4-211ENST00000449159 CDK19Q9BWU1 502 aa15.02■□□□□ -0
SMPD4-211ENST00000449159 MARF1Q9Y4F3 1742 aaKnown RBP15.02□□□□□ -0.01
SMPD4-211ENST00000449159 DDX17Q92841 729 aaKnown RBP15.01□□□□□ -0.01
SMPD4-211ENST00000449159 COL22A1Q8NFW1 1626 aaPredicted RBP15.01□□□□□ -0.01
SMPD4-211ENST00000449159 ESCO1Q5FWF5 840 aa15□□□□□ -0.01
SMPD4-211ENST00000449159 TESK2Q96S53 571 aa15□□□□□ -0.01
SMPD4-211ENST00000449159 CABP2Q9NPB3 220 aa15□□□□□ -0.01
SMPD4-211ENST00000449159 RGS12O14924 1447 aa15□□□□□ -0.01
SMPD4-211ENST00000449159 PNPLA6Q8IY17 1366 aa14.98□□□□□ -0.01
SMPD4-211ENST00000449159 AFF2P51816 1311 aa14.98□□□□□ -0.01
SMPD4-211ENST00000449159 EVC2Q86UK5 1308 aa14.98□□□□□ -0.01
SMPD4-211ENST00000449159 NUTM2BA6NNL0 878 aaPredicted RBP14.98□□□□□ -0.01
SMPD4-211ENST00000449159 NUTM2EB1AL46 878 aaPredicted RBP14.98□□□□□ -0.01
SMPD4-211ENST00000449159 SRPK2P78362 688 aaKnown RBP14.98□□□□□ -0.01
SMPD4-211ENST00000449159 NUTM2AQ8IVF1 878 aaPredicted RBP14.98□□□□□ -0.01
SMPD4-211ENST00000449159 NUDT16Q96DE0 195 aaKnown RBP14.98□□□□□ -0.01
SMPD4-211ENST00000449159 EP400Q96L91 3159 aa14.97□□□□□ -0.01
SMPD4-211ENST00000449159 RXRBP28702 533 aa14.97□□□□□ -0.01
SMPD4-211ENST00000449159 UPF1Q92900 1129 aaKnown RBP eCLIP14.97□□□□□ -0.01
SMPD4-211ENST00000449159 PXDNQ92626 1479 aa14.96□□□□□ -0.01
SMPD4-211ENST00000449159 HSPA5P11021 654 aaKnown RBP14.96□□□□□ -0.01
SMPD4-211ENST00000449159 PMFBP1Q8TBY8 1022 aa14.96□□□□□ -0.01
SMPD4-211ENST00000449159 PHF8Q9UPP1 1060 aa14.96□□□□□ -0.01
SMPD4-211ENST00000449159 PPIP5K1Q6PFW1 1433 aa14.95□□□□□ -0.02
SMPD4-211ENST00000449159 EIF4G2P78344 907 aaKnown RBP eCLIP14.95□□□□□ -0.02
SMPD4-211ENST00000449159 FOXO3O43524 673 aa14.94□□□□□ -0.02
SMPD4-211ENST00000449159 XPCQ01831 940 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-211ENST00000449159 LRRC59Q96AG4 307 aaKnown RBP14.94□□□□□ -0.02
SMPD4-211ENST00000449159 TRPM3Q9HCF6 1732 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-211ENST00000449159 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.93□□□□□ -0.02
SMPD4-211ENST00000449159 CCDC61Q9Y6R9 512 aa14.93□□□□□ -0.02
SMPD4-211ENST00000449159 AKAP12Q02952 1782 aa14.93□□□□□ -0.02
SMPD4-211ENST00000449159 C8orf37Q96NL8 207 aa14.92□□□□□ -0.02
SMPD4-211ENST00000449159 MYOM1P52179 1685 aa14.92□□□□□ -0.02
SMPD4-211ENST00000449159 NPHP3Q7Z494 1330 aa14.92□□□□□ -0.02
SMPD4-211ENST00000449159 ATAD2Q6PL18 1390 aa14.91□□□□□ -0.02
SMPD4-211ENST00000449159 SRCAPQ6ZRS2 3230 aa14.91□□□□□ -0.02
SMPD4-211ENST00000449159 SOS2Q07890 1332 aaPredicted RBP14.91□□□□□ -0.02
SMPD4-211ENST00000449159 POLR3AO14802 1390 aaPredicted RBP14.9□□□□□ -0.02
SMPD4-211ENST00000449159 TMF1P82094 1093 aa14.9□□□□□ -0.02
SMPD4-211ENST00000449159 CABP1Q9NZU7 370 aa14.9□□□□□ -0.02
SMPD4-211ENST00000449159 MON2Q7Z3U7 1717 aa14.89□□□□□ -0.03
SMPD4-211ENST00000449159 PLEKHG3A1L390 1219 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms