RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 LRPPRCP42704 1394 aaKnown RBP9.54□□□□□ -0.88
TRIM49C-201ENST00000448984 OFD1O75665 1012 aa9.54□□□□□ -0.88
TRIM49C-201ENST00000448984 KIF20AO95235 890 aa9.54□□□□□ -0.88
TRIM49C-201ENST00000448984 RAPGEF3O95398 923 aa9.54□□□□□ -0.88
TRIM49C-201ENST00000448984 CC2D1BQ5T0F9 858 aaKnown RBP9.54□□□□□ -0.88
TRIM49C-201ENST00000448984 EFCAB6Q5THR3 1501 aa9.54□□□□□ -0.88
TRIM49C-201ENST00000448984 KDM2BQ8NHM5 1336 aa9.53□□□□□ -0.88
TRIM49C-201ENST00000448984 TNNT2P45379 298 aaPredicted RBP9.53□□□□□ -0.88
TRIM49C-201ENST00000448984 RIPK4P57078 832 aa9.53□□□□□ -0.88
TRIM49C-201ENST00000448984 GGT6Q6P531 493 aa9.53□□□□□ -0.88
TRIM49C-201ENST00000448984 TESK2Q96S53 571 aa9.53□□□□□ -0.88
TRIM49C-201ENST00000448984 CHGAP10645 457 aaKnown RBP9.53□□□□□ -0.88
TRIM49C-201ENST00000448984 PDE3BQ13370 1112 aa9.53□□□□□ -0.88
TRIM49C-201ENST00000448984 CENPQQ7L2Z9 268 aaPredicted RBP9.53□□□□□ -0.88
TRIM49C-201ENST00000448984 GRPEL1Q9HAV7 217 aa9.52□□□□□ -0.89
TRIM49C-201ENST00000448984 ZHX1Q9UKY1 873 aaPredicted RBP9.52□□□□□ -0.89
TRIM49C-201ENST00000448984 MROH2AA6NES4 1674 aa9.52□□□□□ -0.89
TRIM49C-201ENST00000448984 TAF3Q5VWG9 929 aa9.51□□□□□ -0.89
TRIM49C-201ENST00000448984 TMC1Q8TDI8 760 aa9.51□□□□□ -0.89
TRIM49C-201ENST00000448984 ARID4BQ4LE39 1312 aaPredicted RBP9.51□□□□□ -0.89
TRIM49C-201ENST00000448984 NUTM2DQ5VT03 806 aaPredicted RBP9.51□□□□□ -0.89
TRIM49C-201ENST00000448984 ARXQ96QS3 562 aa9.51□□□□□ -0.89
TRIM49C-201ENST00000448984 GTPBP4Q9BZE4 634 aaKnown RBP9.51□□□□□ -0.89
TRIM49C-201ENST00000448984 PTPRTO14522 1441 aa9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 MADDQ8WXG6 1647 aa9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 PPP4R3BQ5MIZ7 849 aa9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 ANTXR1Q9H6X2 564 aa9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 PANK3Q9H999 370 aa9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 SIGLEC1Q9BZZ2 1709 aa9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 YEATS2Q9ULM3 1422 aa9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 ZMYM4Q5VZL5 1548 aa9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 KIF1BO60333 1816 aa9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 VGFO15240 615 aaPredicted RBP9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 LETM1O95202 739 aaPredicted RBP9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 CFAP70Q5T0N1 1121 aa9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 KLHL34Q8N239 644 aa9.5□□□□□ -0.89
TRIM49C-201ENST00000448984 CAMSAP1Q5T5Y3 1602 aa9.49□□□□□ -0.89
TRIM49C-201ENST00000448984 DYNC1I1O14576 645 aa9.49□□□□□ -0.89
TRIM49C-201ENST00000448984 PNISRQ8TF01 805 aaKnown RBP9.49□□□□□ -0.89
TRIM49C-201ENST00000448984 IFT172Q9UG01 1749 aa9.49□□□□□ -0.89
TRIM49C-201ENST00000448984 ADGRF5Q8IZF2 1346 aa9.49□□□□□ -0.89
TRIM49C-201ENST00000448984 KANK1Q14678 1352 aa9.49□□□□□ -0.89
TRIM49C-201ENST00000448984 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
TRIM49C-201ENST00000448984 TMEM51Q9NW97 253 aa9.48□□□□□ -0.89
TRIM49C-201ENST00000448984 LMTK2Q8IWU2 1503 aa9.48□□□□□ -0.89
TRIM49C-201ENST00000448984 NLRP1Q9C000 1473 aa9.48□□□□□ -0.89
TRIM49C-201ENST00000448984 GPRASP1Q5JY77 1395 aa9.48□□□□□ -0.89
TRIM49C-201ENST00000448984 PER1O15534 1290 aaPredicted RBP9.48□□□□□ -0.89
TRIM49C-201ENST00000448984 MCM4P33991 863 aa9.48□□□□□ -0.89
TRIM49C-201ENST00000448984 FAM69CQ0P6D2 419 aa9.48□□□□□ -0.89
TRIM49C-201ENST00000448984 ZSCAN30Q86W11 494 aa9.48□□□□□ -0.89
TRIM49C-201ENST00000448984 LAMC1P11047 1609 aa9.47□□□□□ -0.89
TRIM49C-201ENST00000448984 ABCC3O15438 1527 aa9.47□□□□□ -0.89
TRIM49C-201ENST00000448984 CCDC173Q0VFZ6 552 aa9.47□□□□□ -0.89
TRIM49C-201ENST00000448984 FTSJ3Q8IY81 847 aaKnown RBP9.47□□□□□ -0.89
TRIM49C-201ENST00000448984 ANP32BQ92688 251 aaKnown RBP9.47□□□□□ -0.89
TRIM49C-201ENST00000448984 CCDC94Q9BW85 323 aaPredicted RBP9.47□□□□□ -0.89
TRIM49C-201ENST00000448984 FAM13BQ9NYF5 915 aa9.47□□□□□ -0.89
TRIM49C-201ENST00000448984 ZSCAN20P17040 1043 aaPredicted RBP9.47□□□□□ -0.89
TRIM49C-201ENST00000448984 BRD4O60885 1362 aaPredicted RBP9.46□□□□□ -0.89
TRIM49C-201ENST00000448984 COL17A1Q9UMD9 1497 aaPredicted RBP9.46□□□□□ -0.89
TRIM49C-201ENST00000448984 INSRP06213 1382 aa9.46□□□□□ -0.9
TRIM49C-201ENST00000448984 NPATQ14207 1427 aa9.46□□□□□ -0.9
TRIM49C-201ENST00000448984 DDX11L8A8MPP1 907 aa9.46□□□□□ -0.9
TRIM49C-201ENST00000448984 TMF1P82094 1093 aa9.46□□□□□ -0.9
TRIM49C-201ENST00000448984 IQGAP1P46940 1657 aa9.46□□□□□ -0.9
TRIM49C-201ENST00000448984 MYBBP1AQ9BQG0 1328 aaKnown RBP9.45□□□□□ -0.9
TRIM49C-201ENST00000448984 MSNP26038 577 aaKnown RBP9.45□□□□□ -0.9
TRIM49C-201ENST00000448984 PPP1R9BQ96SB3 815 aa9.45□□□□□ -0.9
TRIM49C-201ENST00000448984 CRBNQ96SW2 442 aa9.45□□□□□ -0.9
TRIM49C-201ENST00000448984 USP19O94966 1318 aa9.45□□□□□ -0.9
TRIM49C-201ENST00000448984 ZC3H13Q5T200 1668 aaKnown RBP9.45□□□□□ -0.9
TRIM49C-201ENST00000448984 TRAK2O60296 914 aa9.44□□□□□ -0.9
TRIM49C-201ENST00000448984 TEX2Q8IWB9 1127 aa9.44□□□□□ -0.9
TRIM49C-201ENST00000448984 SLKQ9H2G2 1235 aaPredicted RBP9.44□□□□□ -0.9
TRIM49C-201ENST00000448984 TAOK2Q9UL54 1235 aa9.44□□□□□ -0.9
TRIM49C-201ENST00000448984 UQCRHLA0A096LP55 91 aa9.44□□□□□ -0.9
TRIM49C-201ENST00000448984 UQCRHP07919 91 aa9.44□□□□□ -0.9
TRIM49C-201ENST00000448984 HS1BP3Q53T59 392 aa9.44□□□□□ -0.9
TRIM49C-201ENST00000448984 TMEM132EQ6IEE7 984 aa9.44□□□□□ -0.9
TRIM49C-201ENST00000448984 ADGRB3O60242 1522 aa9.43□□□□□ -0.9
TRIM49C-201ENST00000448984 SYNMO15061 1565 aa9.43□□□□□ -0.9
TRIM49C-201ENST00000448984 NEURL4Q96JN8 1562 aa9.43□□□□□ -0.9
TRIM49C-201ENST00000448984 BRD2P25440 801 aaKnown RBP9.43□□□□□ -0.9
TRIM49C-201ENST00000448984 MYO5BQ9ULV0 1848 aa9.43□□□□□ -0.9
TRIM49C-201ENST00000448984 PPLO60437 1756 aa9.43□□□□□ -0.9
TRIM49C-201ENST00000448984 PRDM10Q9NQV6 1147 aa9.43□□□□□ -0.9
TRIM49C-201ENST00000448984 ZMYM3Q14202 1370 aa9.43□□□□□ -0.9
TRIM49C-201ENST00000448984 PIK3C2BO00750 1634 aa9.42□□□□□ -0.9
TRIM49C-201ENST00000448984 CHRM1P11229 460 aaPredicted RBP9.42□□□□□ -0.9
TRIM49C-201ENST00000448984 PTMSP20962 102 aa9.42□□□□□ -0.9
TRIM49C-201ENST00000448984 RALBP1Q15311 655 aa9.42□□□□□ -0.9
TRIM49C-201ENST00000448984 SKAP1Q86WV1 359 aa9.42□□□□□ -0.9
TRIM49C-201ENST00000448984 TRAK1Q9UPV9 953 aa9.42□□□□□ -0.9
TRIM49C-201ENST00000448984 PARD3Q8TEW0 1356 aa9.42□□□□□ -0.9
TRIM49C-201ENST00000448984 KIAA1210Q9ULL0 1709 aa9.42□□□□□ -0.9
TRIM49C-201ENST00000448984 NOS1P29475 1434 aa9.41□□□□□ -0.9
TRIM49C-201ENST00000448984 ZNF500O60304 480 aaPredicted RBP9.41□□□□□ -0.9
TRIM49C-201ENST00000448984 CSPP1Q1MSJ5 1256 aa9.41□□□□□ -0.9
TRIM49C-201ENST00000448984 ZNF830Q96NB3 372 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms