RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 MINK1Q8N4C8 1332 aaPredicted RBP16.74■□□□□ 0.27
RCL1-208ENST00000448872 C14orf37Q86TY3 774 aa16.73■□□□□ 0.27
RCL1-208ENST00000448872 EIF3AQ14152 1382 aaKnown RBP16.72■□□□□ 0.27
RCL1-208ENST00000448872 EIF4G2P78344 907 aaKnown RBP eCLIP16.72■□□□□ 0.27
RCL1-208ENST00000448872 KNDC1Q76NI1 1749 aa16.7■□□□□ 0.26
RCL1-208ENST00000448872 TESK2Q96S53 571 aa16.7■□□□□ 0.26
RCL1-208ENST00000448872 ADGRL3Q9HAR2 1447 aa16.68■□□□□ 0.26
RCL1-208ENST00000448872 ARHGEF28Q8N1W1 1705 aaKnown RBP16.68■□□□□ 0.26
RCL1-208ENST00000448872 CERKQ8TCT0 537 aa16.67■□□□□ 0.26
RCL1-208ENST00000448872 NCOA3Q9Y6Q9 1424 aa16.67■□□□□ 0.26
RCL1-208ENST00000448872 C19orf44Q9H6X5 657 aa16.67■□□□□ 0.26
RCL1-208ENST00000448872 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.66■□□□□ 0.26
RCL1-208ENST00000448872 NUTM2FA1L443 756 aa16.66■□□□□ 0.26
RCL1-208ENST00000448872 MSH6P52701 1360 aa16.65■□□□□ 0.26
RCL1-208ENST00000448872 WASLO00401 505 aaPredicted RBP16.64■□□□□ 0.25
RCL1-208ENST00000448872 CDK19Q9BWU1 502 aa16.64■□□□□ 0.25
RCL1-208ENST00000448872 CABP2Q9NPB3 220 aa16.64■□□□□ 0.25
RCL1-208ENST00000448872 DISP3Q9P2K9 1392 aa16.63■□□□□ 0.25
RCL1-208ENST00000448872 ATF3P18847 181 aa16.63■□□□□ 0.25
RCL1-208ENST00000448872 SBNO2Q9Y2G9 1366 aa16.62■□□□□ 0.25
RCL1-208ENST00000448872 C11orf95C9JLR9 678 aaPredicted RBP16.62■□□□□ 0.25
RCL1-208ENST00000448872 TULP4Q9NRJ4 1543 aa16.62■□□□□ 0.25
RCL1-208ENST00000448872 NALCNQ8IZF0 1738 aa16.62■□□□□ 0.25
RCL1-208ENST00000448872 SRPK2P78362 688 aaKnown RBP16.61■□□□□ 0.25
RCL1-208ENST00000448872 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
RCL1-208ENST00000448872 PRR36Q9H6K5 1346 aa16.6■□□□□ 0.25
RCL1-208ENST00000448872 QRICH2Q9H0J4 1663 aa16.6■□□□□ 0.25
RCL1-208ENST00000448872 CADPS2Q86UW7 1296 aa16.6■□□□□ 0.25
RCL1-208ENST00000448872 DCCP43146 1447 aa16.59■□□□□ 0.25
RCL1-208ENST00000448872 XIRP1Q702N8 1843 aaKnown RBP16.59■□□□□ 0.25
RCL1-208ENST00000448872 TMF1P82094 1093 aa16.59■□□□□ 0.25
RCL1-208ENST00000448872 ADGRB2O60241 1585 aa16.58■□□□□ 0.25
RCL1-208ENST00000448872 CDC42BPGQ6DT37 1551 aa16.58■□□□□ 0.24
RCL1-208ENST00000448872 MST1RQ04912 1400 aa16.57■□□□□ 0.24
RCL1-208ENST00000448872 UBAP1LF5GYI3 381 aa16.57■□□□□ 0.24
RCL1-208ENST00000448872 NUDT16Q96DE0 195 aaKnown RBP16.57■□□□□ 0.24
RCL1-208ENST00000448872 SLAIN2Q9P270 581 aa16.57■□□□□ 0.24
RCL1-208ENST00000448872 ORAI2Q96SN7 254 aa16.56■□□□□ 0.24
RCL1-208ENST00000448872 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
RCL1-208ENST00000448872 IQSEC2Q5JU85 1478 aa16.55■□□□□ 0.24
RCL1-208ENST00000448872 C1orf167Q5SNV9 1468 aa16.55■□□□□ 0.24
RCL1-208ENST00000448872 PIP4K2BP78356 416 aa16.54■□□□□ 0.24
RCL1-208ENST00000448872 ESCO1Q5FWF5 840 aa16.54■□□□□ 0.24
RCL1-208ENST00000448872 TOM1O60784 492 aa16.54■□□□□ 0.24
RCL1-208ENST00000448872 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
RCL1-208ENST00000448872 ATP7BP35670 1465 aa16.54■□□□□ 0.24
RCL1-208ENST00000448872 WASHC2AQ641Q2 1341 aa16.53■□□□□ 0.24
RCL1-208ENST00000448872 SLC24A1O60721 1099 aa16.53■□□□□ 0.24
RCL1-208ENST00000448872 ANKARQ7Z5J8 1434 aa16.52■□□□□ 0.24
RCL1-208ENST00000448872 BRINP3Q76B58 766 aa16.52■□□□□ 0.23
RCL1-208ENST00000448872 PMFBP1Q8TBY8 1022 aa16.52■□□□□ 0.23
RCL1-208ENST00000448872 CABP1Q9NZU7 370 aa16.52■□□□□ 0.23
RCL1-208ENST00000448872 CCDC61Q9Y6R9 512 aa16.52■□□□□ 0.23
RCL1-208ENST00000448872 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
RCL1-208ENST00000448872 TMC1Q8TDI8 760 aa16.51■□□□□ 0.23
RCL1-208ENST00000448872 DDX17Q92841 729 aaKnown RBP16.51■□□□□ 0.23
RCL1-208ENST00000448872 ATAD2Q6PL18 1390 aa16.5■□□□□ 0.23
RCL1-208ENST00000448872 FMN2Q9NZ56 1722 aa16.5■□□□□ 0.23
RCL1-208ENST00000448872 CDCA8Q53HL2 280 aa16.5■□□□□ 0.23
RCL1-208ENST00000448872 SLC12A5Q9H2X9 1139 aa16.5■□□□□ 0.23
RCL1-208ENST00000448872 USP32Q8NFA0 1604 aa16.5■□□□□ 0.23
RCL1-208ENST00000448872 PPIP5K1Q6PFW1 1433 aa16.5■□□□□ 0.23
RCL1-208ENST00000448872 PUS7Q96PZ0 661 aaKnown RBP16.49■□□□□ 0.23
RCL1-208ENST00000448872 PHF8Q9UPP1 1060 aa16.49■□□□□ 0.23
RCL1-208ENST00000448872 CCDC7Q96M83 1385 aa16.49■□□□□ 0.23
RCL1-208ENST00000448872 FOXO3O43524 673 aa16.48■□□□□ 0.23
RCL1-208ENST00000448872 PLEKHG3A1L390 1219 aa16.47■□□□□ 0.23
RCL1-208ENST00000448872 XPCQ01831 940 aaPredicted RBP16.47■□□□□ 0.23
RCL1-208ENST00000448872 ZNF316A6NFI3 1004 aaPredicted RBP16.46■□□□□ 0.23
RCL1-208ENST00000448872 ACEP12821 1306 aa16.45■□□□□ 0.22
RCL1-208ENST00000448872 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
RCL1-208ENST00000448872 NGDNQ8NEJ9 315 aaKnown RBP16.45■□□□□ 0.22
RCL1-208ENST00000448872 CD163L1Q9NR16 1453 aa16.43■□□□□ 0.22
RCL1-208ENST00000448872 POLR3AO14802 1390 aaPredicted RBP16.42■□□□□ 0.22
RCL1-208ENST00000448872 A0A1W2PP64 1363 aa16.42■□□□□ 0.22
RCL1-208ENST00000448872 TOPAZ1Q8N9V7 1692 aa16.41■□□□□ 0.22
RCL1-208ENST00000448872 PSME1Q06323 249 aa16.41■□□□□ 0.22
RCL1-208ENST00000448872 PANK3Q9H999 370 aa16.41■□□□□ 0.22
RCL1-208ENST00000448872 CPSF1Q10570 1443 aaKnown RBP16.4■□□□□ 0.22
RCL1-208ENST00000448872 NINLQ9Y2I6 1382 aa16.4■□□□□ 0.22
RCL1-208ENST00000448872 KRT28Q7Z3Y7 464 aa16.4■□□□□ 0.22
RCL1-208ENST00000448872 CARD14Q9BXL6 1004 aa16.4■□□□□ 0.22
RCL1-208ENST00000448872 ROBO1Q9Y6N7 1651 aa16.4■□□□□ 0.22
RCL1-208ENST00000448872 NPHP3Q7Z494 1330 aa16.39■□□□□ 0.22
RCL1-208ENST00000448872 HDGFL2Q7Z4V5 671 aaPredicted RBP16.39■□□□□ 0.21
RCL1-208ENST00000448872 TERF2IPQ9NYB0 399 aa16.39■□□□□ 0.21
RCL1-208ENST00000448872 ANKRD36BQ8N2N9 1353 aa16.38■□□□□ 0.21
RCL1-208ENST00000448872 KTN1Q86UP2 1357 aaKnown RBP16.38■□□□□ 0.21
RCL1-208ENST00000448872 RGPD8O14715 1765 aaPredicted RBP16.37■□□□□ 0.21
RCL1-208ENST00000448872 USP6P35125 1406 aa16.37■□□□□ 0.21
RCL1-208ENST00000448872 HSPA1LP34931 641 aa16.37■□□□□ 0.21
RCL1-208ENST00000448872 DDX10Q13206 875 aaKnown RBP16.37■□□□□ 0.21
RCL1-208ENST00000448872 FBXO41Q8TF61 875 aa16.37■□□□□ 0.21
RCL1-208ENST00000448872 SOS2Q07890 1332 aaPredicted RBP16.37■□□□□ 0.21
RCL1-208ENST00000448872 PXDNQ92626 1479 aa16.36■□□□□ 0.21
RCL1-208ENST00000448872 PAK3O75914 559 aaPredicted RBP16.36■□□□□ 0.21
RCL1-208ENST00000448872 ZNF692Q9BU19 519 aaPredicted RBP16.36■□□□□ 0.21
RCL1-208ENST00000448872 MYOM1P52179 1685 aa16.36■□□□□ 0.21
RCL1-208ENST00000448872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.35■□□□□ 0.21
RCL1-208ENST00000448872 SSH2Q76I76 1423 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms