RNA–Protein interactions for RNA: ENST00000448572.1

SSBP3-209, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-209ENST00000448572 SLC4A1APQ9BWU0 796 aaKnown RBP15.5■□□□□ 0.07
SSBP3-209ENST00000448572 ROBO2Q9HCK4 1378 aa15.49■□□□□ 0.07
SSBP3-209ENST00000448572 ESCO1Q5FWF5 840 aa15.49■□□□□ 0.07
SSBP3-209ENST00000448572 ACIN1Q9UKV3 1341 aaKnown RBP15.47■□□□□ 0.07
SSBP3-209ENST00000448572 NAIPQ13075 1403 aa15.47■□□□□ 0.07
SSBP3-209ENST00000448572 RRBP1Q9P2E9 1410 aaKnown RBP15.46■□□□□ 0.07
SSBP3-209ENST00000448572 CDC42BPGQ6DT37 1551 aa15.45■□□□□ 0.06
SSBP3-209ENST00000448572 ATRNO75882 1429 aa15.45■□□□□ 0.06
SSBP3-209ENST00000448572 ANKRD30BQ9BXX2 1392 aa15.45■□□□□ 0.06
SSBP3-209ENST00000448572 COL22A1Q8NFW1 1626 aaPredicted RBP15.44■□□□□ 0.06
SSBP3-209ENST00000448572 CCDC144AA2RUR9 1427 aa15.43■□□□□ 0.06
SSBP3-209ENST00000448572 SF3B2Q13435 895 aaKnown RBP15.43■□□□□ 0.06
SSBP3-209ENST00000448572 GJD4Q96KN9 370 aaPredicted RBP15.43■□□□□ 0.06
SSBP3-209ENST00000448572 MYOM2P54296 1465 aa15.43■□□□□ 0.06
SSBP3-209ENST00000448572 FOXO3O43524 673 aa15.42■□□□□ 0.06
SSBP3-209ENST00000448572 HAP1P54257 671 aaPredicted RBP15.42■□□□□ 0.06
SSBP3-209ENST00000448572 PSME1Q06323 249 aa15.41■□□□□ 0.06
SSBP3-209ENST00000448572 PPARGC1BQ86YN6 1023 aaKnown RBP15.4■□□□□ 0.06
SSBP3-209ENST00000448572 UNC5CLQ8IV45 518 aa15.4■□□□□ 0.06
SSBP3-209ENST00000448572 TECPR2O15040 1411 aa15.4■□□□□ 0.06
SSBP3-209ENST00000448572 ABCC11Q96J66 1382 aa15.39■□□□□ 0.05
SSBP3-209ENST00000448572 BCL9LQ86UU0 1499 aa15.39■□□□□ 0.05
SSBP3-209ENST00000448572 PXDNQ92626 1479 aa15.39■□□□□ 0.05
SSBP3-209ENST00000448572 SIRT1Q96EB6 747 aa15.38■□□□□ 0.05
SSBP3-209ENST00000448572 STK26Q9P289 416 aa15.38■□□□□ 0.05
SSBP3-209ENST00000448572 BLMP54132 1417 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-209ENST00000448572 SPATA31A3Q5VYP0 1347 aa15.36■□□□□ 0.05
SSBP3-209ENST00000448572 PPLO60437 1756 aa15.36■□□□□ 0.05
SSBP3-209ENST00000448572 RGL3Q3MIN7 710 aa15.35■□□□□ 0.05
SSBP3-209ENST00000448572 KIF1AQ12756 1690 aa15.35■□□□□ 0.05
SSBP3-209ENST00000448572 XPCQ01831 940 aaPredicted RBP15.34■□□□□ 0.05
SSBP3-209ENST00000448572 KRT28Q7Z3Y7 464 aa15.34■□□□□ 0.05
SSBP3-209ENST00000448572 ADGRF5Q8IZF2 1346 aa15.34■□□□□ 0.05
SSBP3-209ENST00000448572 ARHGEF10O15013 1369 aa15.34■□□□□ 0.05
SSBP3-209ENST00000448572 NUTM2FA1L443 756 aa15.33■□□□□ 0.04
SSBP3-209ENST00000448572 WAPLQ7Z5K2 1190 aa15.33■□□□□ 0.04
SSBP3-209ENST00000448572 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.04
SSBP3-209ENST00000448572 SLIT2O94813 1529 aa15.33■□□□□ 0.04
SSBP3-209ENST00000448572 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.32■□□□□ 0.04
SSBP3-209ENST00000448572 PHF8Q9UPP1 1060 aa15.32■□□□□ 0.04
SSBP3-209ENST00000448572 CCDC9Q9Y3X0 531 aaKnown RBP15.32■□□□□ 0.04
SSBP3-209ENST00000448572 VPS72Q15906 364 aa15.31■□□□□ 0.04
SSBP3-209ENST00000448572 PIK3C2GO75747 1445 aa15.31■□□□□ 0.04
SSBP3-209ENST00000448572 TNS3Q68CZ2 1445 aa15.31■□□□□ 0.04
SSBP3-209ENST00000448572 YTHDC2Q9H6S0 1430 aaKnown RBP15.31■□□□□ 0.04
SSBP3-209ENST00000448572 RALGAPBQ86X10 1494 aa15.31■□□□□ 0.04
SSBP3-209ENST00000448572 MARF1Q9Y4F3 1742 aaKnown RBP15.31■□□□□ 0.04
SSBP3-209ENST00000448572 SBNO1A3KN83 1393 aa15.3■□□□□ 0.04
SSBP3-209ENST00000448572 EIF3AQ14152 1382 aaKnown RBP15.3■□□□□ 0.04
SSBP3-209ENST00000448572 SPATA31E1Q6ZUB1 1445 aa15.3■□□□□ 0.04
SSBP3-209ENST00000448572 MPHOSPH9Q99550 1183 aa15.3■□□□□ 0.04
SSBP3-209ENST00000448572 LMOD2Q6P5Q4 547 aa15.29■□□□□ 0.04
SSBP3-209ENST00000448572 KNDC1Q76NI1 1749 aa15.29■□□□□ 0.04
SSBP3-209ENST00000448572 A0A0G2JS52 829 aa15.28■□□□□ 0.04
SSBP3-209ENST00000448572 BAG6P46379 1132 aa15.28■□□□□ 0.04
SSBP3-209ENST00000448572 MYT1Q01538 1121 aa15.28■□□□□ 0.04
SSBP3-209ENST00000448572 TMEM132EQ6IEE7 984 aa15.28■□□□□ 0.04
SSBP3-209ENST00000448572 SEPT12Q8IYM1 358 aa15.28■□□□□ 0.04
SSBP3-209ENST00000448572 USP32Q8NFA0 1604 aa15.28■□□□□ 0.04
SSBP3-209ENST00000448572 KRT27Q7Z3Y8 459 aa15.27■□□□□ 0.04
SSBP3-209ENST00000448572 C14orf93Q9H972 538 aaKnown RBP15.27■□□□□ 0.04
SSBP3-209ENST00000448572 POGKQ9P215 609 aa15.27■□□□□ 0.04
SSBP3-209ENST00000448572 ANKARQ7Z5J8 1434 aa15.26■□□□□ 0.03
SSBP3-209ENST00000448572 FMN2Q9NZ56 1722 aa15.26■□□□□ 0.03
SSBP3-209ENST00000448572 ONECUT3O60422 494 aaPredicted RBP15.26■□□□□ 0.03
SSBP3-209ENST00000448572 GPRASP1Q5JY77 1395 aa15.25■□□□□ 0.03
SSBP3-209ENST00000448572 PLEKHH1Q9ULM0 1364 aa15.24■□□□□ 0.03
SSBP3-209ENST00000448572 STAC3Q96MF2 364 aa15.24■□□□□ 0.03
SSBP3-209ENST00000448572 NRXN1Q9ULB1 1477 aa15.24■□□□□ 0.03
SSBP3-209ENST00000448572 GLI3P10071 1580 aa15.24■□□□□ 0.03
SSBP3-209ENST00000448572 PRAM1Q96QH2 718 aa15.23■□□□□ 0.03
SSBP3-209ENST00000448572 NWD2Q9ULI1 1742 aa15.22■□□□□ 0.03
SSBP3-209ENST00000448572 SRCAPQ6ZRS2 3230 aa15.21■□□□□ 0.03
SSBP3-209ENST00000448572 IFT172Q9UG01 1749 aa15.2■□□□□ 0.02
SSBP3-209ENST00000448572 EP400Q96L91 3159 aa15.2■□□□□ 0.02
SSBP3-209ENST00000448572 DEFB132Q7Z7B7 95 aa15.2■□□□□ 0.02
SSBP3-209ENST00000448572 CABLES1Q8TDN4 633 aa15.2■□□□□ 0.02
SSBP3-209ENST00000448572 DLC1Q96QB1 1528 aa15.2■□□□□ 0.02
SSBP3-209ENST00000448572 CFAP70Q5T0N1 1121 aa15.19■□□□□ 0.02
SSBP3-209ENST00000448572 SAFB2Q14151 953 aaKnown RBP eCLIP15.18■□□□□ 0.02
SSBP3-209ENST00000448572 BTG4Q9NY30 223 aa15.18■□□□□ 0.02
SSBP3-209ENST00000448572 FAM83GA6ND36 823 aa15.17■□□□□ 0.02
SSBP3-209ENST00000448572 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
SSBP3-209ENST00000448572 FAM98CQ17RN3 349 aaKnown RBP15.17■□□□□ 0.02
SSBP3-209ENST00000448572 PMFBP1Q8TBY8 1022 aa15.17■□□□□ 0.02
SSBP3-209ENST00000448572 NGDNQ8NEJ9 315 aaKnown RBP15.16■□□□□ 0.02
SSBP3-209ENST00000448572 PLCH1Q4KWH8 1693 aa15.16■□□□□ 0.02
SSBP3-209ENST00000448572 LRP5O75197 1615 aa15.15■□□□□ 0.02
SSBP3-209ENST00000448572 PRDM11Q9NQV5 511 aa15.15■□□□□ 0.02
SSBP3-209ENST00000448572 ADGRB2O60241 1585 aa15.15■□□□□ 0.02
SSBP3-209ENST00000448572 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
SSBP3-209ENST00000448572 SPATA31A5Q5VU36 1347 aa15.13■□□□□ 0.01
SSBP3-209ENST00000448572 SPATA31A7Q8IWB4 1347 aa15.13■□□□□ 0.01
SSBP3-209ENST00000448572 PARD3Q8TEW0 1356 aa15.12■□□□□ 0.01
SSBP3-209ENST00000448572 COL14A1Q05707 1796 aaKnown RBP15.12■□□□□ 0.01
SSBP3-209ENST00000448572 C11orf95C9JLR9 678 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-209ENST00000448572 WASLO00401 505 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-209ENST00000448572 HRCP23327 699 aa15.12■□□□□ 0.01
SSBP3-209ENST00000448572 FAM196AQ6ZSG2 479 aa15.12■□□□□ 0.01
SSBP3-209ENST00000448572 TRAK1Q9UPV9 953 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms