RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 RBSNQ9H1K0 784 aa11.71□□□□□ -0.54
SYNPO2-204ENST00000448416 KDM5DQ9BY66 1539 aa11.71□□□□□ -0.54
SYNPO2-204ENST00000448416 BAG4O95429 457 aaKnown RBP11.71□□□□□ -0.54
SYNPO2-204ENST00000448416 CBX1P83916 185 aa11.7□□□□□ -0.54
SYNPO2-204ENST00000448416 GTPBP4Q9BZE4 634 aaKnown RBP11.7□□□□□ -0.54
SYNPO2-204ENST00000448416 DNTTIP2Q5QJE6 756 aaKnown RBP11.7□□□□□ -0.54
SYNPO2-204ENST00000448416 ABCC2Q92887 1545 aa11.7□□□□□ -0.54
SYNPO2-204ENST00000448416 KIF20AO95235 890 aa11.69□□□□□ -0.54
SYNPO2-204ENST00000448416 GTF2E1P29083 439 aaPredicted RBP11.69□□□□□ -0.54
SYNPO2-204ENST00000448416 ZSCAN23Q3MJ62 389 aa11.69□□□□□ -0.54
SYNPO2-204ENST00000448416 CCDC39Q9UFE4 941 aa11.69□□□□□ -0.54
SYNPO2-204ENST00000448416 K7ELQ4 463 aaPredicted RBP11.69□□□□□ -0.54
SYNPO2-204ENST00000448416 MCTP1Q6DN14 999 aa11.69□□□□□ -0.54
SYNPO2-204ENST00000448416 MVPQ14764 893 aaKnown RBP11.68□□□□□ -0.54
SYNPO2-204ENST00000448416 FTSJ3Q8IY81 847 aaKnown RBP11.68□□□□□ -0.54
SYNPO2-204ENST00000448416 BCL11BQ9C0K0 894 aaPredicted RBP11.68□□□□□ -0.54
SYNPO2-204ENST00000448416 ZBTB7CA1YPR0 619 aa11.68□□□□□ -0.54
SYNPO2-204ENST00000448416 STAC3Q96MF2 364 aa11.68□□□□□ -0.54
SYNPO2-204ENST00000448416 PRDM15P57071 1507 aaPredicted RBP11.68□□□□□ -0.54
SYNPO2-204ENST00000448416 PRIM1P49642 420 aaKnown RBP11.68□□□□□ -0.54
SYNPO2-204ENST00000448416 PLXNC1O60486 1568 aa11.67□□□□□ -0.54
SYNPO2-204ENST00000448416 LAMC3Q9Y6N6 1575 aa11.67□□□□□ -0.54
SYNPO2-204ENST00000448416 WDR7Q9Y4E6 1490 aa11.67□□□□□ -0.54
SYNPO2-204ENST00000448416 LETM1O95202 739 aaPredicted RBP11.67□□□□□ -0.54
SYNPO2-204ENST00000448416 CD2BP2O95400 341 aaKnown RBP11.67□□□□□ -0.54
SYNPO2-204ENST00000448416 CLEC17AQ6ZS10 378 aa11.67□□□□□ -0.54
SYNPO2-204ENST00000448416 FAM135AQ9P2D6 1515 aa11.67□□□□□ -0.54
SYNPO2-204ENST00000448416 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
SYNPO2-204ENST00000448416 PTMAP06454 111 aaKnown RBP11.66□□□□□ -0.54
SYNPO2-204ENST00000448416 GAS2L2Q8NHY3 880 aa11.66□□□□□ -0.54
SYNPO2-204ENST00000448416 MYRIPQ8NFW9 859 aa11.66□□□□□ -0.54
SYNPO2-204ENST00000448416 RRP7AQ9Y3A4 280 aaKnown RBP11.66□□□□□ -0.54
SYNPO2-204ENST00000448416 TSPY4P0CV99 314 aa11.66□□□□□ -0.54
SYNPO2-204ENST00000448416 TSPY10P0CW01 314 aa11.66□□□□□ -0.54
SYNPO2-204ENST00000448416 CDCA8Q53HL2 280 aa11.66□□□□□ -0.54
SYNPO2-204ENST00000448416 ASXL1Q8IXJ9 1541 aa11.65□□□□□ -0.54
SYNPO2-204ENST00000448416 NAP1L2Q9ULW6 460 aaPredicted RBP11.65□□□□□ -0.54
SYNPO2-204ENST00000448416 DZIP1LQ8IYY4 767 aaKnown RBP11.65□□□□□ -0.54
SYNPO2-204ENST00000448416 KIAA2012Q0VF49 1180 aa11.65□□□□□ -0.55
SYNPO2-204ENST00000448416 ZKSCAN2Q63HK3 967 aa11.65□□□□□ -0.55
SYNPO2-204ENST00000448416 TSC1Q92574 1164 aa11.65□□□□□ -0.55
SYNPO2-204ENST00000448416 JARID2Q92833 1246 aaPredicted RBP11.64□□□□□ -0.55
SYNPO2-204ENST00000448416 RBM42Q9BTD8 480 aaKnown RBP11.64□□□□□ -0.55
SYNPO2-204ENST00000448416 KIF2CQ99661 725 aa11.64□□□□□ -0.55
SYNPO2-204ENST00000448416 HDAC1Q13547 482 aaPredicted RBP11.64□□□□□ -0.55
SYNPO2-204ENST00000448416 PRG4Q92954 1404 aaPredicted RBP11.64□□□□□ -0.55
SYNPO2-204ENST00000448416 GPATCH8Q9UKJ3 1502 aaKnown RBP11.63□□□□□ -0.55
SYNPO2-204ENST00000448416 LMBRD1Q9NUN5 540 aa11.63□□□□□ -0.55
SYNPO2-204ENST00000448416 LAMC1P11047 1609 aa11.63□□□□□ -0.55
SYNPO2-204ENST00000448416 IQGAP2Q13576 1575 aa11.63□□□□□ -0.55
SYNPO2-204ENST00000448416 A2MP01023 1474 aa11.63□□□□□ -0.55
SYNPO2-204ENST00000448416 CROCC2H7BZ55 1655 aa11.63□□□□□ -0.55
SYNPO2-204ENST00000448416 PDIA4P13667 645 aaKnown RBP11.63□□□□□ -0.55
SYNPO2-204ENST00000448416 NUCB2P80303 420 aa11.63□□□□□ -0.55
SYNPO2-204ENST00000448416 HMGN5P82970 282 aaKnown RBP11.63□□□□□ -0.55
SYNPO2-204ENST00000448416 RBM27Q9P2N5 1060 aaKnown RBP11.63□□□□□ -0.55
SYNPO2-204ENST00000448416 AK9Q5TCS8 1911 aa11.63□□□□□ -0.55
SYNPO2-204ENST00000448416 PRIMPOLQ96LW4 560 aa11.62□□□□□ -0.55
SYNPO2-204ENST00000448416 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
SYNPO2-204ENST00000448416 C9orf84Q5VXU9 1444 aa11.62□□□□□ -0.55
SYNPO2-204ENST00000448416 ZNF710Q8N1W2 664 aa11.62□□□□□ -0.55
SYNPO2-204ENST00000448416 LNPKQ9C0E8 428 aa11.62□□□□□ -0.55
SYNPO2-204ENST00000448416 ITSN2Q9NZM3 1697 aa11.62□□□□□ -0.55
SYNPO2-204ENST00000448416 PRPF40AO75400 957 aaKnown RBP11.62□□□□□ -0.55
SYNPO2-204ENST00000448416 ATP2B3Q16720 1220 aa11.62□□□□□ -0.55
SYNPO2-204ENST00000448416 ITPRIPQ8IWB1 547 aa11.61□□□□□ -0.55
SYNPO2-204ENST00000448416 RNF214Q8ND24 703 aa11.61□□□□□ -0.55
SYNPO2-204ENST00000448416 TROQ12816 1431 aaPredicted RBP11.61□□□□□ -0.55
SYNPO2-204ENST00000448416 KIF16BQ96L93 1317 aa11.61□□□□□ -0.55
SYNPO2-204ENST00000448416 LRSAM1Q6UWE0 723 aa11.61□□□□□ -0.55
SYNPO2-204ENST00000448416 PTPRGP23470 1445 aa11.61□□□□□ -0.55
SYNPO2-204ENST00000448416 NPC1L1Q9UHC9 1359 aa11.61□□□□□ -0.55
SYNPO2-204ENST00000448416 NUP153P49790 1475 aaKnown RBP11.61□□□□□ -0.55
SYNPO2-204ENST00000448416 SYCE3A1L190 88 aa11.6□□□□□ -0.55
SYNPO2-204ENST00000448416 DDX19BQ9UMR2 479 aa11.6□□□□□ -0.55
SYNPO2-204ENST00000448416 WDR63Q8IWG1 891 aa11.6□□□□□ -0.55
SYNPO2-204ENST00000448416 TCP11L2Q8N4U5 519 aa11.6□□□□□ -0.55
SYNPO2-204ENST00000448416 TMEM51Q9NW97 253 aa11.6□□□□□ -0.55
SYNPO2-204ENST00000448416 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
SYNPO2-204ENST00000448416 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.6□□□□□ -0.55
SYNPO2-204ENST00000448416 ABCC10Q5T3U5 1492 aa11.6□□□□□ -0.55
SYNPO2-204ENST00000448416 RUNDC1Q96C34 613 aa11.6□□□□□ -0.55
SYNPO2-204ENST00000448416 KIF3AQ9Y496 699 aa11.6□□□□□ -0.55
SYNPO2-204ENST00000448416 FAM177BA6PVY3 158 aa11.59□□□□□ -0.55
SYNPO2-204ENST00000448416 TAF3Q5VWG9 929 aa11.59□□□□□ -0.55
SYNPO2-204ENST00000448416 EIF2AK4Q9P2K8 1649 aaKnown RBP11.59□□□□□ -0.55
SYNPO2-204ENST00000448416 IGSF3O75054 1194 aa11.58□□□□□ -0.56
SYNPO2-204ENST00000448416 GPT2Q8TD30 523 aa11.58□□□□□ -0.56
SYNPO2-204ENST00000448416 NUCB1Q02818 461 aa11.58□□□□□ -0.56
SYNPO2-204ENST00000448416 BMP2KLQ5H9B9 411 aa11.58□□□□□ -0.56
SYNPO2-204ENST00000448416 SMC4Q9NTJ3 1288 aa11.58□□□□□ -0.56
SYNPO2-204ENST00000448416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.58□□□□□ -0.56
SYNPO2-204ENST00000448416 ARHGAP31Q2M1Z3 1444 aa11.58□□□□□ -0.56
SYNPO2-204ENST00000448416 CHD1LQ86WJ1 897 aa11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 PDCL2Q8N4E4 241 aa11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 TMEM63CQ9P1W3 806 aa11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 SYNMO15061 1565 aa11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 GTF2F1P35269 517 aaKnown RBP eCLIP11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 CGNQ9P2M7 1197 aaKnown RBP11.57□□□□□ -0.56
SYNPO2-204ENST00000448416 NUP160Q12769 1436 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms