RNA–Protein interactions for RNA: ENST00000448062.1

RPL23AP28-201, Transcript of ribosomal protein L23a pseudogene 28, humanhuman

BASIC

Gene RPL23AP28, Length 470 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23AP28-201ENST00000448062 PTCH1Q13635 1447 aa9.6□□□□□ -0.87
RPL23AP28-201ENST00000448062 FAM135BQ49AJ0 1406 aa9.6□□□□□ -0.87
RPL23AP28-201ENST00000448062 NKTRP30414 1462 aaKnown RBP9.59□□□□□ -0.87
RPL23AP28-201ENST00000448062 NUTM2FA1L443 756 aa9.58□□□□□ -0.88
RPL23AP28-201ENST00000448062 C14orf37Q86TY3 774 aa9.58□□□□□ -0.88
RPL23AP28-201ENST00000448062 EIF3AQ14152 1382 aaKnown RBP9.58□□□□□ -0.88
RPL23AP28-201ENST00000448062 XIRP1Q702N8 1843 aaKnown RBP9.58□□□□□ -0.88
RPL23AP28-201ENST00000448062 QRICH2Q9H0J4 1663 aa9.58□□□□□ -0.88
RPL23AP28-201ENST00000448062 CDK19Q9BWU1 502 aa9.57□□□□□ -0.88
RPL23AP28-201ENST00000448062 DISP3Q9P2K9 1392 aa9.57□□□□□ -0.88
RPL23AP28-201ENST00000448062 TULP4Q9NRJ4 1543 aa9.56□□□□□ -0.88
RPL23AP28-201ENST00000448062 NALCNQ8IZF0 1738 aa9.56□□□□□ -0.88
RPL23AP28-201ENST00000448062 CABP2Q9NPB3 220 aa9.56□□□□□ -0.88
RPL23AP28-201ENST00000448062 ADGRL3Q9HAR2 1447 aa9.56□□□□□ -0.88
RPL23AP28-201ENST00000448062 WASLO00401 505 aaPredicted RBP9.55□□□□□ -0.88
RPL23AP28-201ENST00000448062 C19orf44Q9H6X5 657 aa9.55□□□□□ -0.88
RPL23AP28-201ENST00000448062 PRR36Q9H6K5 1346 aa9.55□□□□□ -0.88
RPL23AP28-201ENST00000448062 SBNO2Q9Y2G9 1366 aa9.54□□□□□ -0.88
RPL23AP28-201ENST00000448062 POLR3GLQ9BT43 218 aa9.54□□□□□ -0.88
RPL23AP28-201ENST00000448062 SRPK2P78362 688 aaKnown RBP9.53□□□□□ -0.88
RPL23AP28-201ENST00000448062 TMF1P82094 1093 aa9.53□□□□□ -0.88
RPL23AP28-201ENST00000448062 CERKQ8TCT0 537 aa9.53□□□□□ -0.88
RPL23AP28-201ENST00000448062 KIF7Q2M1P5 1343 aa9.53□□□□□ -0.88
RPL23AP28-201ENST00000448062 WASHC2AQ641Q2 1341 aa9.53□□□□□ -0.88
RPL23AP28-201ENST00000448062 EVC2Q86UK5 1308 aa9.53□□□□□ -0.88
RPL23AP28-201ENST00000448062 ADGRB2O60241 1585 aa9.52□□□□□ -0.89
RPL23AP28-201ENST00000448062 ATF3P18847 181 aa9.52□□□□□ -0.89
RPL23AP28-201ENST00000448062 NUDT16Q96DE0 195 aaKnown RBP9.52□□□□□ -0.89
RPL23AP28-201ENST00000448062 NCOA3Q9Y6Q9 1424 aa9.52□□□□□ -0.89
RPL23AP28-201ENST00000448062 MSH6P52701 1360 aa9.51□□□□□ -0.89
RPL23AP28-201ENST00000448062 ZNF316A6NFI3 1004 aaPredicted RBP9.51□□□□□ -0.89
RPL23AP28-201ENST00000448062 ORAI2Q96SN7 254 aa9.51□□□□□ -0.89
RPL23AP28-201ENST00000448062 USP32Q8NFA0 1604 aa9.51□□□□□ -0.89
RPL23AP28-201ENST00000448062 CCDC7Q96M83 1385 aa9.5□□□□□ -0.89
RPL23AP28-201ENST00000448062 CDC42BPGQ6DT37 1551 aa9.5□□□□□ -0.89
RPL23AP28-201ENST00000448062 MST1RQ04912 1400 aa9.5□□□□□ -0.89
RPL23AP28-201ENST00000448062 SLC12A5Q9H2X9 1139 aa9.5□□□□□ -0.89
RPL23AP28-201ENST00000448062 SLAIN2Q9P270 581 aa9.5□□□□□ -0.89
RPL23AP28-201ENST00000448062 FMN2Q9NZ56 1722 aa9.5□□□□□ -0.89
RPL23AP28-201ENST00000448062 ATP7BP35670 1465 aa9.49□□□□□ -0.89
RPL23AP28-201ENST00000448062 C1orf167Q5SNV9 1468 aa9.49□□□□□ -0.89
RPL23AP28-201ENST00000448062 CADPS2Q86UW7 1296 aa9.49□□□□□ -0.89
RPL23AP28-201ENST00000448062 PMFBP1Q8TBY8 1022 aa9.49□□□□□ -0.89
RPL23AP28-201ENST00000448062 TMC1Q8TDI8 760 aa9.49□□□□□ -0.89
RPL23AP28-201ENST00000448062 DDX17Q92841 729 aaKnown RBP9.49□□□□□ -0.89
RPL23AP28-201ENST00000448062 CABP1Q9NZU7 370 aa9.49□□□□□ -0.89
RPL23AP28-201ENST00000448062 RGPD8O14715 1765 aaPredicted RBP9.49□□□□□ -0.89
RPL23AP28-201ENST00000448062 ESCO1Q5FWF5 840 aa9.48□□□□□ -0.89
RPL23AP28-201ENST00000448062 CCDC61Q9Y6R9 512 aa9.48□□□□□ -0.89
RPL23AP28-201ENST00000448062 DCCP43146 1447 aa9.48□□□□□ -0.89
RPL23AP28-201ENST00000448062 PPIP5K1Q6PFW1 1433 aa9.48□□□□□ -0.89
RPL23AP28-201ENST00000448062 UBAP1LF5GYI3 381 aa9.47□□□□□ -0.89
RPL23AP28-201ENST00000448062 SLC24A1O60721 1099 aa9.47□□□□□ -0.89
RPL23AP28-201ENST00000448062 PIP4K2BP78356 416 aa9.47□□□□□ -0.89
RPL23AP28-201ENST00000448062 DDX10Q13206 875 aaKnown RBP9.46□□□□□ -0.9
RPL23AP28-201ENST00000448062 CDCA8Q53HL2 280 aa9.46□□□□□ -0.9
RPL23AP28-201ENST00000448062 BRINP3Q76B58 766 aa9.46□□□□□ -0.9
RPL23AP28-201ENST00000448062 PUS7Q96PZ0 661 aaKnown RBP9.46□□□□□ -0.9
RPL23AP28-201ENST00000448062 PHF8Q9UPP1 1060 aa9.46□□□□□ -0.9
RPL23AP28-201ENST00000448062 ANKARQ7Z5J8 1434 aa9.46□□□□□ -0.9
RPL23AP28-201ENST00000448062 CD163L1Q9NR16 1453 aa9.46□□□□□ -0.9
RPL23AP28-201ENST00000448062 MYOM1P52179 1685 aa9.45□□□□□ -0.9
RPL23AP28-201ENST00000448062 PLEKHG3A1L390 1219 aa9.45□□□□□ -0.9
RPL23AP28-201ENST00000448062 FOXO3O43524 673 aa9.45□□□□□ -0.9
RPL23AP28-201ENST00000448062 XPCQ01831 940 aaPredicted RBP9.45□□□□□ -0.9
RPL23AP28-201ENST00000448062 CARD14Q9BXL6 1004 aa9.45□□□□□ -0.9
RPL23AP28-201ENST00000448062 PANK3Q9H999 370 aa9.45□□□□□ -0.9
RPL23AP28-201ENST00000448062 ACEP12821 1306 aa9.45□□□□□ -0.9
RPL23AP28-201ENST00000448062 ATAD2Q6PL18 1390 aa9.45□□□□□ -0.9
RPL23AP28-201ENST00000448062 TOPAZ1Q8N9V7 1692 aa9.45□□□□□ -0.9
RPL23AP28-201ENST00000448062 TOM1O60784 492 aa9.44□□□□□ -0.9
RPL23AP28-201ENST00000448062 NGDNQ8NEJ9 315 aaKnown RBP9.44□□□□□ -0.9
RPL23AP28-201ENST00000448062 SCAF1Q9H7N4 1312 aaKnown RBP9.44□□□□□ -0.9
RPL23AP28-201ENST00000448062 IQSEC2Q5JU85 1478 aa9.44□□□□□ -0.9
RPL23AP28-201ENST00000448062 A0A1W2PP64 1363 aa9.43□□□□□ -0.9
RPL23AP28-201ENST00000448062 CPSF1Q10570 1443 aaKnown RBP9.42□□□□□ -0.9
RPL23AP28-201ENST00000448062 POLR3AO14802 1390 aaPredicted RBP9.42□□□□□ -0.9
RPL23AP28-201ENST00000448062 ROBO1Q9Y6N7 1651 aa9.42□□□□□ -0.9
RPL23AP28-201ENST00000448062 PER1O15534 1290 aaPredicted RBP9.41□□□□□ -0.9
RPL23AP28-201ENST00000448062 PSME1Q06323 249 aa9.41□□□□□ -0.9
RPL23AP28-201ENST00000448062 KRT28Q7Z3Y7 464 aa9.41□□□□□ -0.9
RPL23AP28-201ENST00000448062 ZRANB1Q9UGI0 708 aa9.41□□□□□ -0.9
RPL23AP28-201ENST00000448062 ITSN1Q15811 1721 aa9.41□□□□□ -0.9
RPL23AP28-201ENST00000448062 KTN1Q86UP2 1357 aaKnown RBP9.4□□□□□ -0.9
RPL23AP28-201ENST00000448062 ANKRD36BQ8N2N9 1353 aa9.4□□□□□ -0.9
RPL23AP28-201ENST00000448062 CNGB1Q14028 1251 aaPredicted RBP9.4□□□□□ -0.9
RPL23AP28-201ENST00000448062 HDGFL2Q7Z4V5 671 aaPredicted RBP9.4□□□□□ -0.9
RPL23AP28-201ENST00000448062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.4□□□□□ -0.9
RPL23AP28-201ENST00000448062 TERF2IPQ9NYB0 399 aa9.4□□□□□ -0.9
RPL23AP28-201ENST00000448062 USP6P35125 1406 aa9.39□□□□□ -0.91
RPL23AP28-201ENST00000448062 SSH2Q76I76 1423 aa9.39□□□□□ -0.91
RPL23AP28-201ENST00000448062 NINLQ9Y2I6 1382 aa9.39□□□□□ -0.91
RPL23AP28-201ENST00000448062 PAK3O75914 559 aaPredicted RBP9.39□□□□□ -0.91
RPL23AP28-201ENST00000448062 PLEKHG5O94827 1062 aa9.39□□□□□ -0.91
RPL23AP28-201ENST00000448062 ZNF692Q9BU19 519 aaPredicted RBP9.39□□□□□ -0.91
RPL23AP28-201ENST00000448062 PXDNQ92626 1479 aa9.39□□□□□ -0.91
RPL23AP28-201ENST00000448062 NSD3Q9BZ95 1437 aa9.39□□□□□ -0.91
RPL23AP28-201ENST00000448062 SOS2Q07890 1332 aaPredicted RBP9.38□□□□□ -0.91
RPL23AP28-201ENST00000448062 TTC21BQ7Z4L5 1316 aa9.38□□□□□ -0.91
RPL23AP28-201ENST00000448062 AKAP12Q02952 1782 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms