RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 SOS2Q07890 1332 aaPredicted RBP15.41■□□□□ 0.06
VSTM1-206ENST00000447872 ESCO1Q5FWF5 840 aa15.4■□□□□ 0.06
VSTM1-206ENST00000447872 PRAG1Q86YV5 1406 aa15.4■□□□□ 0.06
VSTM1-206ENST00000447872 KIF1BO60333 1816 aa15.4■□□□□ 0.06
VSTM1-206ENST00000447872 ACIN1Q9UKV3 1341 aaKnown RBP15.4■□□□□ 0.06
VSTM1-206ENST00000447872 ANKRD30BQ9BXX2 1392 aa15.39■□□□□ 0.05
VSTM1-206ENST00000447872 RBM6P78332 1123 aaKnown RBP15.38■□□□□ 0.05
VSTM1-206ENST00000447872 TMEM132EQ6IEE7 984 aa15.37■□□□□ 0.05
VSTM1-206ENST00000447872 WAPLQ7Z5K2 1190 aa15.37■□□□□ 0.05
VSTM1-206ENST00000447872 NPHP3Q7Z494 1330 aa15.37■□□□□ 0.05
VSTM1-206ENST00000447872 NHSL1Q5SYE7 1610 aa15.36■□□□□ 0.05
VSTM1-206ENST00000447872 SPATA31E1Q6ZUB1 1445 aa15.36■□□□□ 0.05
VSTM1-206ENST00000447872 NALCNQ8IZF0 1738 aa15.35■□□□□ 0.05
VSTM1-206ENST00000447872 FOXO3O43524 673 aa15.35■□□□□ 0.05
VSTM1-206ENST00000447872 LRPPRCP42704 1394 aaKnown RBP15.35■□□□□ 0.05
VSTM1-206ENST00000447872 ABCC11Q96J66 1382 aa15.35■□□□□ 0.05
VSTM1-206ENST00000447872 USP21Q9UK80 565 aa15.34■□□□□ 0.05
VSTM1-206ENST00000447872 NUTM2FA1L443 756 aa15.33■□□□□ 0.04
VSTM1-206ENST00000447872 XPCQ01831 940 aaPredicted RBP15.32■□□□□ 0.04
VSTM1-206ENST00000447872 FNBP4Q8N3X1 1017 aaPredicted RBP15.32■□□□□ 0.04
VSTM1-206ENST00000447872 RGS12O14924 1447 aa15.32■□□□□ 0.04
VSTM1-206ENST00000447872 SIRT1Q96EB6 747 aa15.31■□□□□ 0.04
VSTM1-206ENST00000447872 C14orf93Q9H972 538 aaKnown RBP15.31■□□□□ 0.04
VSTM1-206ENST00000447872 TRPC5Q9UL62 973 aaPredicted RBP15.31■□□□□ 0.04
VSTM1-206ENST00000447872 TECPR2O15040 1411 aa15.31■□□□□ 0.04
VSTM1-206ENST00000447872 ATAD2Q6PL18 1390 aa15.3■□□□□ 0.04
VSTM1-206ENST00000447872 PPLO60437 1756 aa15.29■□□□□ 0.04
VSTM1-206ENST00000447872 PIK3C2GO75747 1445 aa15.29■□□□□ 0.04
VSTM1-206ENST00000447872 PLEKHH1Q9ULM0 1364 aa15.29■□□□□ 0.04
VSTM1-206ENST00000447872 LAMC1P11047 1609 aa15.28■□□□□ 0.04
VSTM1-206ENST00000447872 CDC42BPGQ6DT37 1551 aa15.28■□□□□ 0.04
VSTM1-206ENST00000447872 YTHDC2Q9H6S0 1430 aaKnown RBP15.28■□□□□ 0.04
VSTM1-206ENST00000447872 CFAP70Q5T0N1 1121 aa15.28■□□□□ 0.04
VSTM1-206ENST00000447872 DHX57Q6P158 1386 aaKnown RBP15.27■□□□□ 0.04
VSTM1-206ENST00000447872 PXDNQ92626 1479 aa15.26■□□□□ 0.03
VSTM1-206ENST00000447872 KRT28Q7Z3Y7 464 aa15.25■□□□□ 0.03
VSTM1-206ENST00000447872 MYOM2P54296 1465 aa15.25■□□□□ 0.03
VSTM1-206ENST00000447872 SPATA31A3Q5VYP0 1347 aa15.24■□□□□ 0.03
VSTM1-206ENST00000447872 PSME1Q06323 249 aa15.24■□□□□ 0.03
VSTM1-206ENST00000447872 PRAM1Q96QH2 718 aa15.24■□□□□ 0.03
VSTM1-206ENST00000447872 POGKQ9P215 609 aa15.24■□□□□ 0.03
VSTM1-206ENST00000447872 PHF8Q9UPP1 1060 aa15.24■□□□□ 0.03
VSTM1-206ENST00000447872 LRP5O75197 1615 aa15.24■□□□□ 0.03
VSTM1-206ENST00000447872 SAFB2Q14151 953 aaKnown RBP eCLIP15.23■□□□□ 0.03
VSTM1-206ENST00000447872 ATRNO75882 1429 aa15.23■□□□□ 0.03
VSTM1-206ENST00000447872 RAB3GAP2Q9H2M9 1393 aa15.23■□□□□ 0.03
VSTM1-206ENST00000447872 HAP1P54257 671 aaPredicted RBP15.22■□□□□ 0.03
VSTM1-206ENST00000447872 CCDC125Q86Z20 511 aa15.21■□□□□ 0.03
VSTM1-206ENST00000447872 GJD4Q96KN9 370 aaPredicted RBP15.21■□□□□ 0.03
VSTM1-206ENST00000447872 BCL9LQ86UU0 1499 aa15.2■□□□□ 0.02
VSTM1-206ENST00000447872 NRXN1Q9ULB1 1477 aa15.2■□□□□ 0.02
VSTM1-206ENST00000447872 UNC5CLQ8IV45 518 aa15.2■□□□□ 0.02
VSTM1-206ENST00000447872 KDM2AQ9Y2K7 1162 aa15.2■□□□□ 0.02
VSTM1-206ENST00000447872 EP400Q96L91 3159 aa15.2■□□□□ 0.02
VSTM1-206ENST00000447872 COL22A1Q8NFW1 1626 aaPredicted RBP15.19■□□□□ 0.02
VSTM1-206ENST00000447872 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
VSTM1-206ENST00000447872 DCAF11Q8TEB1 546 aa15.18■□□□□ 0.02
VSTM1-206ENST00000447872 STAC3Q96MF2 364 aa15.18■□□□□ 0.02
VSTM1-206ENST00000447872 TRAK1Q9UPV9 953 aa15.18■□□□□ 0.02
VSTM1-206ENST00000447872 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
VSTM1-206ENST00000447872 YY1P25490 414 aa15.17■□□□□ 0.02
VSTM1-206ENST00000447872 CABLES1Q8TDN4 633 aa15.17■□□□□ 0.02
VSTM1-206ENST00000447872 SBNO1A3KN83 1393 aa15.16■□□□□ 0.02
VSTM1-206ENST00000447872 ZEB1P37275 1124 aaPredicted RBP15.16■□□□□ 0.02
VSTM1-206ENST00000447872 PMFBP1Q8TBY8 1022 aa15.16■□□□□ 0.02
VSTM1-206ENST00000447872 IFT172Q9UG01 1749 aa15.16■□□□□ 0.02
VSTM1-206ENST00000447872 HIRIP3Q9BW71 556 aaPredicted RBP15.15■□□□□ 0.02
VSTM1-206ENST00000447872 TNS3Q68CZ2 1445 aa15.15■□□□□ 0.02
VSTM1-206ENST00000447872 KNDC1Q76NI1 1749 aa15.14■□□□□ 0.01
VSTM1-206ENST00000447872 ARHGEF10O15013 1369 aa15.14■□□□□ 0.01
VSTM1-206ENST00000447872 MINK1Q8N4C8 1332 aaPredicted RBP15.14■□□□□ 0.01
VSTM1-206ENST00000447872 ANKARQ7Z5J8 1434 aa15.13■□□□□ 0.01
VSTM1-206ENST00000447872 CCDC9Q9Y3X0 531 aaKnown RBP15.13■□□□□ 0.01
VSTM1-206ENST00000447872 KIF1AQ12756 1690 aa15.12■□□□□ 0.01
VSTM1-206ENST00000447872 SLIT2O94813 1529 aa15.12■□□□□ 0.01
VSTM1-206ENST00000447872 FMN2Q9NZ56 1722 aa15.12■□□□□ 0.01
VSTM1-206ENST00000447872 VPS72Q15906 364 aa15.12■□□□□ 0.01
VSTM1-206ENST00000447872 DLC1Q96QB1 1528 aa15.12■□□□□ 0.01
VSTM1-206ENST00000447872 EIF3AQ14152 1382 aaKnown RBP15.11■□□□□ 0.01
VSTM1-206ENST00000447872 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
VSTM1-206ENST00000447872 WASLO00401 505 aaPredicted RBP15.11■□□□□ 0.01
VSTM1-206ENST00000447872 RALGAPBQ86X10 1494 aa15.11■□□□□ 0.01
VSTM1-206ENST00000447872 FAM83GA6ND36 823 aa15.1■□□□□ 0.01
VSTM1-206ENST00000447872 SEPT12Q8IYM1 358 aa15.1■□□□□ 0.01
VSTM1-206ENST00000447872 NGDNQ8NEJ9 315 aaKnown RBP15.1■□□□□ 0.01
VSTM1-206ENST00000447872 ADGRB1O14514 1584 aa15.08■□□□□ 0
VSTM1-206ENST00000447872 ONECUT3O60422 494 aaPredicted RBP15.08■□□□□ 0
VSTM1-206ENST00000447872 PRR36Q9H6K5 1346 aa15.08■□□□□ 0
VSTM1-206ENST00000447872 PAK3O75914 559 aaPredicted RBP15.07■□□□□ 0
VSTM1-206ENST00000447872 SF3B2Q13435 895 aaKnown RBP15.06■□□□□ 0
VSTM1-206ENST00000447872 USP32Q8NFA0 1604 aa15.06■□□□□ 0
VSTM1-206ENST00000447872 A0A0G2JS52 829 aa15.05■□□□□ -0
VSTM1-206ENST00000447872 MYT1Q01538 1121 aa15.05■□□□□ -0
VSTM1-206ENST00000447872 KRT27Q7Z3Y8 459 aa15.05■□□□□ -0
VSTM1-206ENST00000447872 NUDT16Q96DE0 195 aaKnown RBP15.05■□□□□ -0
VSTM1-206ENST00000447872 BTG4Q9NY30 223 aa15.05■□□□□ -0
VSTM1-206ENST00000447872 BLMP54132 1417 aaPredicted RBP15.04■□□□□ -0
VSTM1-206ENST00000447872 ADGRB2O60241 1585 aa15.03■□□□□ -0
VSTM1-206ENST00000447872 CDK19Q9BWU1 502 aa15.03■□□□□ -0
VSTM1-206ENST00000447872 MARF1Q9Y4F3 1742 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms