RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 SAFB2Q14151 953 aaKnown RBP eCLIP26■■□□□ 1.75
FAM3A-215ENST00000447601 PRAM1Q96QH2 718 aa26■■□□□ 1.75
FAM3A-215ENST00000447601 SENP3Q9H4L4 574 aaPredicted RBP26■■□□□ 1.75
FAM3A-215ENST00000447601 POGKQ9P215 609 aa26■■□□□ 1.75
FAM3A-215ENST00000447601 CGNL1Q0VF96 1302 aa25.98■■□□□ 1.75
FAM3A-215ENST00000447601 CABP2Q9NPB3 220 aa25.98■■□□□ 1.75
FAM3A-215ENST00000447601 ATAD2Q6PL18 1390 aa25.97■■□□□ 1.75
FAM3A-215ENST00000447601 PPP4R2Q9NY27 417 aa25.97■■□□□ 1.75
FAM3A-215ENST00000447601 SALL2Q9Y467 1007 aaPredicted RBP25.97■■□□□ 1.75
FAM3A-215ENST00000447601 HDGFP51858 240 aaKnown RBP25.96■■□□□ 1.75
FAM3A-215ENST00000447601 DLC1Q96QB1 1528 aa25.96■■□□□ 1.75
FAM3A-215ENST00000447601 SRPK2P78362 688 aaKnown RBP25.95■■□□□ 1.75
FAM3A-215ENST00000447601 MORC1Q86VD1 984 aa25.95■■□□□ 1.75
FAM3A-215ENST00000447601 NSD2O96028 1365 aa25.95■■□□□ 1.74
FAM3A-215ENST00000447601 MINK1Q8N4C8 1332 aaPredicted RBP25.93■■□□□ 1.74
FAM3A-215ENST00000447601 POLR3AO14802 1390 aaPredicted RBP25.93■■□□□ 1.74
FAM3A-215ENST00000447601 ABCC11Q96J66 1382 aa25.91■■□□□ 1.74
FAM3A-215ENST00000447601 SETD1AO15047 1707 aaKnown RBP25.88■■□□□ 1.73
FAM3A-215ENST00000447601 TERF2IPQ9NYB0 399 aa25.86■■□□□ 1.73
FAM3A-215ENST00000447601 A0A1W2PP64 1363 aa25.86■■□□□ 1.73
FAM3A-215ENST00000447601 TMEM2Q9UHN6 1383 aa25.86■■□□□ 1.73
FAM3A-215ENST00000447601 NRXN3Q9Y4C0 1643 aa25.86■■□□□ 1.73
FAM3A-215ENST00000447601 RCAN3Q9UKA8 241 aa25.86■■□□□ 1.73
FAM3A-215ENST00000447601 CDCA7LQ96GN5 454 aa25.85■■□□□ 1.73
FAM3A-215ENST00000447601 NLRP1Q9C000 1473 aa25.85■■□□□ 1.73
FAM3A-215ENST00000447601 CDK19Q9BWU1 502 aa25.84■■□□□ 1.73
FAM3A-215ENST00000447601 TSHZ2Q9NRE2 1034 aa25.83■■□□□ 1.73
FAM3A-215ENST00000447601 METP08581 1390 aa25.82■■□□□ 1.72
FAM3A-215ENST00000447601 PLEKHH1Q9ULM0 1364 aa25.82■■□□□ 1.72
FAM3A-215ENST00000447601 NGEFQ8N5V2 710 aa25.81■■□□□ 1.72
FAM3A-215ENST00000447601 UBR1Q8IWV7 1749 aa25.81■■□□□ 1.72
FAM3A-215ENST00000447601 TNNT2P45379 298 aaPredicted RBP25.81■■□□□ 1.72
FAM3A-215ENST00000447601 ZNF521Q96K83 1311 aa25.8■■□□□ 1.72
FAM3A-215ENST00000447601 RRP1P56182 461 aaKnown RBP25.8■■□□□ 1.72
FAM3A-215ENST00000447601 HDGFL2Q7Z4V5 671 aaPredicted RBP25.8■■□□□ 1.72
FAM3A-215ENST00000447601 WAPLQ7Z5K2 1190 aa25.79■■□□□ 1.72
FAM3A-215ENST00000447601 SIRT1Q96EB6 747 aa25.79■■□□□ 1.72
FAM3A-215ENST00000447601 CFAP53Q96M91 514 aa25.79■■□□□ 1.72
FAM3A-215ENST00000447601 CD163L1Q9NR16 1453 aa25.79■■□□□ 1.72
FAM3A-215ENST00000447601 TRHP20396 242 aaPredicted RBP25.79■■□□□ 1.72
FAM3A-215ENST00000447601 TECPR2O15040 1411 aa25.79■■□□□ 1.72
FAM3A-215ENST00000447601 FAM135BQ49AJ0 1406 aa25.78■■□□□ 1.72
FAM3A-215ENST00000447601 CCDC146Q8IYE0 955 aa25.77■■□□□ 1.72
FAM3A-215ENST00000447601 MED14O60244 1454 aa25.76■■□□□ 1.71
FAM3A-215ENST00000447601 MTHFSP49914 203 aa25.76■■□□□ 1.71
FAM3A-215ENST00000447601 GOLGA2Q08379 1002 aa25.76■■□□□ 1.71
FAM3A-215ENST00000447601 PLEKHG1Q9ULL1 1385 aa25.74■■□□□ 1.71
FAM3A-215ENST00000447601 APAF1O14727 1248 aa25.74■■□□□ 1.71
FAM3A-215ENST00000447601 KNDC1Q76NI1 1749 aa25.74■■□□□ 1.71
FAM3A-215ENST00000447601 B4GALNT3Q6L9W6 998 aa25.73■■□□□ 1.71
FAM3A-215ENST00000447601 CABP1Q9NZU7 370 aa25.73■■□□□ 1.71
FAM3A-215ENST00000447601 ATP7BP35670 1465 aa25.73■■□□□ 1.71
FAM3A-215ENST00000447601 CPS1P31327 1500 aa25.72■■□□□ 1.71
FAM3A-215ENST00000447601 CEBPAP49715 358 aaPredicted RBP25.72■■□□□ 1.71
FAM3A-215ENST00000447601 SHPRHQ149N8 1683 aa25.71■■□□□ 1.71
FAM3A-215ENST00000447601 WASLO00401 505 aaPredicted RBP25.71■■□□□ 1.71
FAM3A-215ENST00000447601 TXNDC2Q86VQ3 553 aa25.71■■□□□ 1.71
FAM3A-215ENST00000447601 ADAMTS13Q76LX8 1427 aa25.7■■□□□ 1.71
FAM3A-215ENST00000447601 DUSP27Q5VZP5 1158 aa25.7■■□□□ 1.71
FAM3A-215ENST00000447601 FYB1O15117 783 aa25.7■■□□□ 1.7
FAM3A-215ENST00000447601 GGNBP2Q9H3C7 697 aa25.7■■□□□ 1.7
FAM3A-215ENST00000447601 C3P01024 1663 aa25.69■■□□□ 1.7
FAM3A-215ENST00000447601 EID1Q9Y6B2 187 aa25.68■■□□□ 1.7
FAM3A-215ENST00000447601 SLFN5Q08AF3 891 aa25.67■■□□□ 1.7
FAM3A-215ENST00000447601 RUNDC1Q96C34 613 aa25.67■■□□□ 1.7
FAM3A-215ENST00000447601 FER1L4A9Z1Z3 1794 aa25.66■■□□□ 1.7
FAM3A-215ENST00000447601 LTKP29376 864 aa25.66■■□□□ 1.7
FAM3A-215ENST00000447601 SLIT1O75093 1534 aa25.65■■□□□ 1.7
FAM3A-215ENST00000447601 ARHGAP23Q9P227 1491 aa25.65■■□□□ 1.7
FAM3A-215ENST00000447601 ANKRD26Q9UPS8 1709 aa25.64■■□□□ 1.7
FAM3A-215ENST00000447601 TRMT2AQ8IZ69 625 aaKnown RBP25.64■■□□□ 1.7
FAM3A-215ENST00000447601 CCDC136Q96JN2 1154 aa25.64■■□□□ 1.7
FAM3A-215ENST00000447601 E9PSI1 815 aa25.63■■□□□ 1.69
FAM3A-215ENST00000447601 PPIP5K1Q6PFW1 1433 aa25.62■■□□□ 1.69
FAM3A-215ENST00000447601 ROBO2Q9HCK4 1378 aa25.61■■□□□ 1.69
FAM3A-215ENST00000447601 IQSEC2Q5JU85 1478 aa25.61■■□□□ 1.69
FAM3A-215ENST00000447601 CPSF1Q10570 1443 aaKnown RBP25.61■■□□□ 1.69
FAM3A-215ENST00000447601 THEMISQ8N1K5 641 aaPredicted RBP25.6■■□□□ 1.69
FAM3A-215ENST00000447601 NUDT16Q96DE0 195 aaKnown RBP25.6■■□□□ 1.69
FAM3A-215ENST00000447601 EDC4Q6P2E9 1401 aaKnown RBP25.6■■□□□ 1.69
FAM3A-215ENST00000447601 CCDC61Q9Y6R9 512 aa25.59■■□□□ 1.69
FAM3A-215ENST00000447601 NCBP3Q53F19 620 aaKnown RBP25.58■■□□□ 1.69
FAM3A-215ENST00000447601 WWC1Q8IX03 1113 aa25.58■■□□□ 1.69
FAM3A-215ENST00000447601 U2AF1L5P0DN76 240 aaPredicted RBP25.58■■□□□ 1.68
FAM3A-215ENST00000447601 U2AF1Q01081 240 aaKnown RBP eCLIP25.58■■□□□ 1.68
FAM3A-215ENST00000447601 NKTRP30414 1462 aaKnown RBP25.58■■□□□ 1.68
FAM3A-215ENST00000447601 KIF20BQ96Q89 1820 aa25.57■■□□□ 1.68
FAM3A-215ENST00000447601 TCP11L2Q8N4U5 519 aa25.57■■□□□ 1.68
FAM3A-215ENST00000447601 EXOC6Q8TAG9 804 aa25.57■■□□□ 1.68
FAM3A-215ENST00000447601 COL3A1P02461 1466 aaPredicted RBP25.57■■□□□ 1.68
FAM3A-215ENST00000447601 ADGRB2O60241 1585 aa25.56■■□□□ 1.68
FAM3A-215ENST00000447601 PLPPR3Q6T4P5 718 aa25.56■■□□□ 1.68
FAM3A-215ENST00000447601 CDC42BPGQ6DT37 1551 aa25.56■■□□□ 1.68
FAM3A-215ENST00000447601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.56■■□□□ 1.68
FAM3A-215ENST00000447601 SPINK5Q9NQ38 1064 aaPredicted RBP25.55■■□□□ 1.68
FAM3A-215ENST00000447601 TBX22Q9Y458 520 aa25.55■■□□□ 1.68
FAM3A-215ENST00000447601 CCDC27Q2M243 656 aa25.54■■□□□ 1.68
FAM3A-215ENST00000447601 PHF23Q9BUL5 403 aaPredicted RBP25.54■■□□□ 1.68
FAM3A-215ENST00000447601 PNPLA6Q8IY17 1366 aa25.54■■□□□ 1.68
FAM3A-215ENST00000447601 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms