RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 TRAK1Q9UPV9 953 aa17.15■□□□□ 0.34
RFC4-208ENST00000447345 MST1RQ04912 1400 aa17.14■□□□□ 0.33
RFC4-208ENST00000447345 FAM135BQ49AJ0 1406 aa17.14■□□□□ 0.33
RFC4-208ENST00000447345 HSPA1LP34931 641 aa17.14■□□□□ 0.33
RFC4-208ENST00000447345 SAFB2Q14151 953 aaKnown RBP eCLIP17.14■□□□□ 0.33
RFC4-208ENST00000447345 SLAIN2Q9P270 581 aa17.14■□□□□ 0.33
RFC4-208ENST00000447345 PRAM1Q96QH2 718 aa17.13■□□□□ 0.33
RFC4-208ENST00000447345 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
RFC4-208ENST00000447345 NBPF1Q3BBV0 1214 aa17.12■□□□□ 0.33
RFC4-208ENST00000447345 CCER1Q8TC90 406 aaPredicted RBP17.12■□□□□ 0.33
RFC4-208ENST00000447345 ADGRB2O60241 1585 aa17.11■□□□□ 0.33
RFC4-208ENST00000447345 NHSL1Q5SYE7 1610 aa17.11■□□□□ 0.33
RFC4-208ENST00000447345 POGKQ9P215 609 aa17.11■□□□□ 0.33
RFC4-208ENST00000447345 COL16A1Q07092 1604 aaPredicted RBP17.09■□□□□ 0.33
RFC4-208ENST00000447345 AHDC1Q5TGY3 1603 aaPredicted RBP17.08■□□□□ 0.32
RFC4-208ENST00000447345 C1orf167Q5SNV9 1468 aa17.08■□□□□ 0.32
RFC4-208ENST00000447345 ROCK2O75116 1388 aaKnown RBP17.08■□□□□ 0.32
RFC4-208ENST00000447345 NUTM2FA1L443 756 aa17.08■□□□□ 0.32
RFC4-208ENST00000447345 NBPF8Q3BBV2 869 aa17.08■□□□□ 0.32
RFC4-208ENST00000447345 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
RFC4-208ENST00000447345 MINK1Q8N4C8 1332 aaPredicted RBP17.07■□□□□ 0.32
RFC4-208ENST00000447345 RALGAPBQ86X10 1494 aa17.06■□□□□ 0.32
RFC4-208ENST00000447345 BRINP3Q76B58 766 aa17.06■□□□□ 0.32
RFC4-208ENST00000447345 SIRT1Q96EB6 747 aa17.06■□□□□ 0.32
RFC4-208ENST00000447345 HIRIP3Q9BW71 556 aaPredicted RBP17.06■□□□□ 0.32
RFC4-208ENST00000447345 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
RFC4-208ENST00000447345 ITSN1Q15811 1721 aa17.04■□□□□ 0.32
RFC4-208ENST00000447345 KIF1AQ12756 1690 aa17.04■□□□□ 0.32
RFC4-208ENST00000447345 ORAI2Q96SN7 254 aa17.02■□□□□ 0.32
RFC4-208ENST00000447345 DDX17Q92841 729 aaKnown RBP17.01■□□□□ 0.31
RFC4-208ENST00000447345 TULP4Q9NRJ4 1543 aa17.01■□□□□ 0.31
RFC4-208ENST00000447345 SHPRHQ149N8 1683 aa17.01■□□□□ 0.31
RFC4-208ENST00000447345 ESCO1Q5FWF5 840 aa17■□□□□ 0.31
RFC4-208ENST00000447345 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
RFC4-208ENST00000447345 MED1Q15648 1581 aaPredicted RBP16.99■□□□□ 0.31
RFC4-208ENST00000447345 TOPAZ1Q8N9V7 1692 aa16.99■□□□□ 0.31
RFC4-208ENST00000447345 GPRASP1Q5JY77 1395 aa16.99■□□□□ 0.31
RFC4-208ENST00000447345 EIF3AQ14152 1382 aaKnown RBP16.98■□□□□ 0.31
RFC4-208ENST00000447345 CARD11Q9BXL7 1154 aa16.97■□□□□ 0.31
RFC4-208ENST00000447345 ANKARQ7Z5J8 1434 aa16.96■□□□□ 0.31
RFC4-208ENST00000447345 WASLO00401 505 aaPredicted RBP16.96■□□□□ 0.31
RFC4-208ENST00000447345 ATP7BP35670 1465 aa16.96■□□□□ 0.31
RFC4-208ENST00000447345 XPCQ01831 940 aaPredicted RBP16.94■□□□□ 0.3
RFC4-208ENST00000447345 PRR36Q9H6K5 1346 aa16.94■□□□□ 0.3
RFC4-208ENST00000447345 PXDNQ92626 1479 aa16.93■□□□□ 0.3
RFC4-208ENST00000447345 JCADQ9P266 1359 aa16.93■□□□□ 0.3
RFC4-208ENST00000447345 FOXO3O43524 673 aa16.92■□□□□ 0.3
RFC4-208ENST00000447345 CDK19Q9BWU1 502 aa16.92■□□□□ 0.3
RFC4-208ENST00000447345 TIMELESSQ9UNS1 1208 aa16.92■□□□□ 0.3
RFC4-208ENST00000447345 PMFBP1Q8TBY8 1022 aa16.91■□□□□ 0.3
RFC4-208ENST00000447345 PHF8Q9UPP1 1060 aa16.91■□□□□ 0.3
RFC4-208ENST00000447345 NPHP3Q7Z494 1330 aa16.91■□□□□ 0.3
RFC4-208ENST00000447345 TRPM3Q9HCF6 1732 aaPredicted RBP16.9■□□□□ 0.3
RFC4-208ENST00000447345 SRPK2P78362 688 aaKnown RBP16.89■□□□□ 0.29
RFC4-208ENST00000447345 SOS2Q07890 1332 aaPredicted RBP16.89■□□□□ 0.29
RFC4-208ENST00000447345 LRP6O75581 1613 aa16.88■□□□□ 0.29
RFC4-208ENST00000447345 COL22A1Q8NFW1 1626 aaPredicted RBP16.88■□□□□ 0.29
RFC4-208ENST00000447345 NUDT16Q96DE0 195 aaKnown RBP16.88■□□□□ 0.29
RFC4-208ENST00000447345 CABP2Q9NPB3 220 aa16.88■□□□□ 0.29
RFC4-208ENST00000447345 PNPLA6Q8IY17 1366 aa16.88■□□□□ 0.29
RFC4-208ENST00000447345 DISP3Q9P2K9 1392 aa16.88■□□□□ 0.29
RFC4-208ENST00000447345 LRRC59Q96AG4 307 aaKnown RBP16.87■□□□□ 0.29
RFC4-208ENST00000447345 USP47Q96K76 1375 aa16.87■□□□□ 0.29
RFC4-208ENST00000447345 ABCA3Q99758 1704 aa16.87■□□□□ 0.29
RFC4-208ENST00000447345 MARF1Q9Y4F3 1742 aaKnown RBP16.86■□□□□ 0.29
RFC4-208ENST00000447345 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
RFC4-208ENST00000447345 PPIP5K1Q6PFW1 1433 aa16.86■□□□□ 0.29
RFC4-208ENST00000447345 ALS2Q96Q42 1657 aa16.85■□□□□ 0.29
RFC4-208ENST00000447345 AKAP12Q02952 1782 aa16.85■□□□□ 0.29
RFC4-208ENST00000447345 NUTM2BA6NNL0 878 aaPredicted RBP16.84■□□□□ 0.29
RFC4-208ENST00000447345 NUTM2EB1AL46 878 aaPredicted RBP16.84■□□□□ 0.29
RFC4-208ENST00000447345 KRT28Q7Z3Y7 464 aa16.84■□□□□ 0.29
RFC4-208ENST00000447345 NUTM2AQ8IVF1 878 aaPredicted RBP16.84■□□□□ 0.29
RFC4-208ENST00000447345 SBNO2Q9Y2G9 1366 aa16.84■□□□□ 0.29
RFC4-208ENST00000447345 PSME1Q06323 249 aa16.83■□□□□ 0.28
RFC4-208ENST00000447345 SPATA31A6Q5VVP1 1343 aa16.83■□□□□ 0.28
RFC4-208ENST00000447345 TNS3Q68CZ2 1445 aa16.83■□□□□ 0.28
RFC4-208ENST00000447345 NGDNQ8NEJ9 315 aaKnown RBP16.83■□□□□ 0.28
RFC4-208ENST00000447345 ST20-MTHFSA0A0A6YYL1 179 aa16.82■□□□□ 0.28
RFC4-208ENST00000447345 PLEKHG5O94827 1062 aa16.82■□□□□ 0.28
RFC4-208ENST00000447345 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
RFC4-208ENST00000447345 CCDC61Q9Y6R9 512 aa16.81■□□□□ 0.28
RFC4-208ENST00000447345 CRYBG1Q9Y4K1 1723 aa16.81■□□□□ 0.28
RFC4-208ENST00000447345 SPATA31A3Q5VYP0 1347 aa16.8■□□□□ 0.28
RFC4-208ENST00000447345 MON2Q7Z3U7 1717 aa16.8■□□□□ 0.28
RFC4-208ENST00000447345 MEX3CQ5U5Q3 659 aaKnown RBP16.8■□□□□ 0.28
RFC4-208ENST00000447345 LMOD2Q6P5Q4 547 aa16.8■□□□□ 0.28
RFC4-208ENST00000447345 ACEP12821 1306 aa16.79■□□□□ 0.28
RFC4-208ENST00000447345 POLR3AO14802 1390 aaPredicted RBP16.78■□□□□ 0.28
RFC4-208ENST00000447345 PHRF1Q9P1Y6 1649 aaKnown RBP16.78■□□□□ 0.28
RFC4-208ENST00000447345 SBNO1A3KN83 1393 aa16.77■□□□□ 0.28
RFC4-208ENST00000447345 ATAD2Q6PL18 1390 aa16.77■□□□□ 0.28
RFC4-208ENST00000447345 NRKQ7Z2Y5 1582 aa16.77■□□□□ 0.28
RFC4-208ENST00000447345 PAK3O75914 559 aaPredicted RBP16.77■□□□□ 0.28
RFC4-208ENST00000447345 TESK2Q96S53 571 aa16.77■□□□□ 0.28
RFC4-208ENST00000447345 CABP1Q9NZU7 370 aa16.77■□□□□ 0.28
RFC4-208ENST00000447345 ADAMTS2O95450 1211 aa16.76■□□□□ 0.27
RFC4-208ENST00000447345 PLEKHG3A1L390 1219 aa16.75■□□□□ 0.27
RFC4-208ENST00000447345 ARHGEF10O15013 1369 aa16.75■□□□□ 0.27
RFC4-208ENST00000447345 PIK3C2AO00443 1686 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms