RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 NALCNQ8IZF0 1738 aa25.34■■□□□ 1.65
TRAPPC4-203ENST00000447216 LRRC7Q96NW7 1537 aa25.32■■□□□ 1.64
TRAPPC4-203ENST00000447216 MINK1Q8N4C8 1332 aaPredicted RBP25.31■■□□□ 1.64
TRAPPC4-203ENST00000447216 TMEM94Q12767 1356 aa25.31■■□□□ 1.64
TRAPPC4-203ENST00000447216 TESK2Q96S53 571 aa25.27■■□□□ 1.64
TRAPPC4-203ENST00000447216 C14orf37Q86TY3 774 aa25.26■■□□□ 1.63
TRAPPC4-203ENST00000447216 ADGRB2O60241 1585 aa25.24■■□□□ 1.63
TRAPPC4-203ENST00000447216 ADGRL3Q9HAR2 1447 aa25.24■■□□□ 1.63
TRAPPC4-203ENST00000447216 TULP4Q9NRJ4 1543 aa25.23■■□□□ 1.63
TRAPPC4-203ENST00000447216 SBNO2Q9Y2G9 1366 aa25.23■■□□□ 1.63
TRAPPC4-203ENST00000447216 NCOA3Q9Y6Q9 1424 aa25.2■■□□□ 1.63
TRAPPC4-203ENST00000447216 DISP3Q9P2K9 1392 aa25.19■■□□□ 1.62
TRAPPC4-203ENST00000447216 FMN2Q9NZ56 1722 aa25.19■■□□□ 1.62
TRAPPC4-203ENST00000447216 CDC42BPGQ6DT37 1551 aa25.18■■□□□ 1.62
TRAPPC4-203ENST00000447216 RGPD8O14715 1765 aaPredicted RBP25.18■■□□□ 1.62
TRAPPC4-203ENST00000447216 EVC2Q86UK5 1308 aa25.16■■□□□ 1.62
TRAPPC4-203ENST00000447216 C11orf95C9JLR9 678 aaPredicted RBP25.16■■□□□ 1.62
TRAPPC4-203ENST00000447216 WASLO00401 505 aaPredicted RBP25.16■■□□□ 1.62
TRAPPC4-203ENST00000447216 TMF1P82094 1093 aa25.16■■□□□ 1.62
TRAPPC4-203ENST00000447216 CDK19Q9BWU1 502 aa25.16■■□□□ 1.62
TRAPPC4-203ENST00000447216 MSH6P52701 1360 aa25.16■■□□□ 1.62
TRAPPC4-203ENST00000447216 C19orf44Q9H6X5 657 aa25.15■■□□□ 1.62
TRAPPC4-203ENST00000447216 NUTM2FA1L443 756 aa25.13■■□□□ 1.61
TRAPPC4-203ENST00000447216 CABP2Q9NPB3 220 aa25.13■■□□□ 1.61
TRAPPC4-203ENST00000447216 USP32Q8NFA0 1604 aa25.12■■□□□ 1.61
TRAPPC4-203ENST00000447216 SRPK2P78362 688 aaKnown RBP25.12■■□□□ 1.61
TRAPPC4-203ENST00000447216 POLR3GLQ9BT43 218 aa25.11■■□□□ 1.61
TRAPPC4-203ENST00000447216 SLC24A1O60721 1099 aa25.1■■□□□ 1.61
TRAPPC4-203ENST00000447216 DCCP43146 1447 aa25.1■■□□□ 1.61
TRAPPC4-203ENST00000447216 ATF3P18847 181 aa25.09■■□□□ 1.61
TRAPPC4-203ENST00000447216 PRR36Q9H6K5 1346 aa25.09■■□□□ 1.61
TRAPPC4-203ENST00000447216 ZNF316A6NFI3 1004 aaPredicted RBP25.07■■□□□ 1.6
TRAPPC4-203ENST00000447216 CERKQ8TCT0 537 aa25.07■■□□□ 1.6
TRAPPC4-203ENST00000447216 ATP7BP35670 1465 aa25.07■■□□□ 1.6
TRAPPC4-203ENST00000447216 KIF7Q2M1P5 1343 aa25.07■■□□□ 1.6
TRAPPC4-203ENST00000447216 ITSN1Q15811 1721 aa25.06■■□□□ 1.6
TRAPPC4-203ENST00000447216 TOPAZ1Q8N9V7 1692 aa25.06■■□□□ 1.6
TRAPPC4-203ENST00000447216 CCDC7Q96M83 1385 aa25.05■■□□□ 1.6
TRAPPC4-203ENST00000447216 MST1RQ04912 1400 aa25.05■■□□□ 1.6
TRAPPC4-203ENST00000447216 MYOM1P52179 1685 aa25.05■■□□□ 1.6
TRAPPC4-203ENST00000447216 CADPS2Q86UW7 1296 aa25.05■■□□□ 1.6
TRAPPC4-203ENST00000447216 NUDT16Q96DE0 195 aaKnown RBP25.05■■□□□ 1.6
TRAPPC4-203ENST00000447216 WASHC2AQ641Q2 1341 aa25.05■■□□□ 1.6
TRAPPC4-203ENST00000447216 CDCA8Q53HL2 280 aa25.04■■□□□ 1.6
TRAPPC4-203ENST00000447216 ANKARQ7Z5J8 1434 aa25.03■■□□□ 1.6
TRAPPC4-203ENST00000447216 IQSEC2Q5JU85 1478 aa25.02■■□□□ 1.6
TRAPPC4-203ENST00000447216 C1orf167Q5SNV9 1468 aa25.02■■□□□ 1.6
TRAPPC4-203ENST00000447216 ATAD2Q6PL18 1390 aa25.01■■□□□ 1.59
TRAPPC4-203ENST00000447216 PUS7Q96PZ0 661 aaKnown RBP25■■□□□ 1.59
TRAPPC4-203ENST00000447216 PPIP5K1Q6PFW1 1433 aa24.98■■□□□ 1.59
TRAPPC4-203ENST00000447216 TMC1Q8TDI8 760 aa24.98■■□□□ 1.59
TRAPPC4-203ENST00000447216 ORAI2Q96SN7 254 aa24.97■■□□□ 1.59
TRAPPC4-203ENST00000447216 SLAIN2Q9P270 581 aa24.97■■□□□ 1.59
TRAPPC4-203ENST00000447216 CCDC61Q9Y6R9 512 aa24.97■■□□□ 1.59
TRAPPC4-203ENST00000447216 ESCO1Q5FWF5 840 aa24.96■■□□□ 1.59
TRAPPC4-203ENST00000447216 SLC12A5Q9H2X9 1139 aa24.96■■□□□ 1.59
TRAPPC4-203ENST00000447216 CABP1Q9NZU7 370 aa24.96■■□□□ 1.59
TRAPPC4-203ENST00000447216 PMFBP1Q8TBY8 1022 aa24.95■■□□□ 1.58
TRAPPC4-203ENST00000447216 UBAP1LF5GYI3 381 aa24.94■■□□□ 1.58
TRAPPC4-203ENST00000447216 AKAP12Q02952 1782 aa24.94■■□□□ 1.58
TRAPPC4-203ENST00000447216 KIF1AQ12756 1690 aa24.94■■□□□ 1.58
TRAPPC4-203ENST00000447216 ROBO1Q9Y6N7 1651 aa24.92■■□□□ 1.58
TRAPPC4-203ENST00000447216 PHF8Q9UPP1 1060 aa24.92■■□□□ 1.58
TRAPPC4-203ENST00000447216 TOM1O60784 492 aa24.91■■□□□ 1.58
TRAPPC4-203ENST00000447216 PLEKHG3A1L390 1219 aa24.9■■□□□ 1.58
TRAPPC4-203ENST00000447216 BRINP3Q76B58 766 aa24.9■■□□□ 1.58
TRAPPC4-203ENST00000447216 CD163L1Q9NR16 1453 aa24.89■■□□□ 1.58
TRAPPC4-203ENST00000447216 NINLQ9Y2I6 1382 aa24.89■■□□□ 1.57
TRAPPC4-203ENST00000447216 ACEP12821 1306 aa24.88■■□□□ 1.57
TRAPPC4-203ENST00000447216 PIP4K2BP78356 416 aa24.88■■□□□ 1.57
TRAPPC4-203ENST00000447216 MON2Q7Z3U7 1717 aa24.88■■□□□ 1.57
TRAPPC4-203ENST00000447216 NGDNQ8NEJ9 315 aaKnown RBP24.87■■□□□ 1.57
TRAPPC4-203ENST00000447216 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
TRAPPC4-203ENST00000447216 DDX10Q13206 875 aaKnown RBP24.86■■□□□ 1.57
TRAPPC4-203ENST00000447216 DDX17Q92841 729 aaKnown RBP24.86■■□□□ 1.57
TRAPPC4-203ENST00000447216 A0A1W2PP64 1363 aa24.85■■□□□ 1.57
TRAPPC4-203ENST00000447216 PANK3Q9H999 370 aa24.85■■□□□ 1.57
TRAPPC4-203ENST00000447216 POLR3AO14802 1390 aaPredicted RBP24.84■■□□□ 1.57
TRAPPC4-203ENST00000447216 NHSL1Q5SYE7 1610 aa24.84■■□□□ 1.57
TRAPPC4-203ENST00000447216 FOXO3O43524 673 aa24.84■■□□□ 1.57
TRAPPC4-203ENST00000447216 CPSF1Q10570 1443 aaKnown RBP24.84■■□□□ 1.57
TRAPPC4-203ENST00000447216 ANKRD36BQ8N2N9 1353 aa24.83■■□□□ 1.57
TRAPPC4-203ENST00000447216 HDGFL2Q7Z4V5 671 aaPredicted RBP24.83■■□□□ 1.57
TRAPPC4-203ENST00000447216 TERF2IPQ9NYB0 399 aa24.83■■□□□ 1.57
TRAPPC4-203ENST00000447216 XPCQ01831 940 aaPredicted RBP24.82■■□□□ 1.56
TRAPPC4-203ENST00000447216 KTN1Q86UP2 1357 aaKnown RBP24.81■■□□□ 1.56
TRAPPC4-203ENST00000447216 NRKQ7Z2Y5 1582 aa24.8■■□□□ 1.56
TRAPPC4-203ENST00000447216 USP6P35125 1406 aa24.79■■□□□ 1.56
TRAPPC4-203ENST00000447216 TRPM3Q9HCF6 1732 aaPredicted RBP24.79■■□□□ 1.56
TRAPPC4-203ENST00000447216 PSME1Q06323 249 aa24.79■■□□□ 1.56
TRAPPC4-203ENST00000447216 CARD14Q9BXL6 1004 aa24.79■■□□□ 1.56
TRAPPC4-203ENST00000447216 PHLPP1O60346 1717 aa24.78■■□□□ 1.56
TRAPPC4-203ENST00000447216 NSD3Q9BZ95 1437 aa24.78■■□□□ 1.56
TRAPPC4-203ENST00000447216 KRT28Q7Z3Y7 464 aa24.77■■□□□ 1.56
TRAPPC4-203ENST00000447216 ZNF692Q9BU19 519 aaPredicted RBP24.77■■□□□ 1.56
TRAPPC4-203ENST00000447216 NPHP3Q7Z494 1330 aa24.77■■□□□ 1.56
TRAPPC4-203ENST00000447216 PXDNQ92626 1479 aa24.77■■□□□ 1.56
TRAPPC4-203ENST00000447216 AHDC1Q5TGY3 1603 aaPredicted RBP24.76■■□□□ 1.55
TRAPPC4-203ENST00000447216 KIF20BQ96Q89 1820 aa24.75■■□□□ 1.55
TRAPPC4-203ENST00000447216 EDC4Q6P2E9 1401 aaKnown RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms