RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 STK26Q9P289 416 aa26.99■■□□□ 1.91
COL9A1-205ENST00000447041 TMEM132EQ6IEE7 984 aa26.98■■□□□ 1.91
COL9A1-205ENST00000447041 MYOM2P54296 1465 aa26.96■■□□□ 1.91
COL9A1-205ENST00000447041 NRXN1Q9ULB1 1477 aa26.96■■□□□ 1.91
COL9A1-205ENST00000447041 ZNF772Q68DY9 489 aaPredicted RBP26.95■■□□□ 1.9
COL9A1-205ENST00000447041 PLEKHH1Q9ULM0 1364 aa26.95■■□□□ 1.9
COL9A1-205ENST00000447041 YTHDC2Q9H6S0 1430 aaKnown RBP26.94■■□□□ 1.9
COL9A1-205ENST00000447041 WAPLQ7Z5K2 1190 aa26.94■■□□□ 1.9
COL9A1-205ENST00000447041 ABCC11Q96J66 1382 aa26.94■■□□□ 1.9
COL9A1-205ENST00000447041 SOS2Q07890 1332 aaPredicted RBP26.92■■□□□ 1.9
COL9A1-205ENST00000447041 AFF2P51816 1311 aa26.9■■□□□ 1.9
COL9A1-205ENST00000447041 FMN2Q9NZ56 1722 aa26.89■■□□□ 1.9
COL9A1-205ENST00000447041 C14orf93Q9H972 538 aaKnown RBP26.88■■□□□ 1.89
COL9A1-205ENST00000447041 ESCO1Q5FWF5 840 aa26.87■■□□□ 1.89
COL9A1-205ENST00000447041 CFAP70Q5T0N1 1121 aa26.87■■□□□ 1.89
COL9A1-205ENST00000447041 C8orf37Q96NL8 207 aa26.87■■□□□ 1.89
COL9A1-205ENST00000447041 PXDNQ92626 1479 aa26.87■■□□□ 1.89
COL9A1-205ENST00000447041 COL22A1Q8NFW1 1626 aaPredicted RBP26.87■■□□□ 1.89
COL9A1-205ENST00000447041 NUTM2FA1L443 756 aa26.86■■□□□ 1.89
COL9A1-205ENST00000447041 NPHP3Q7Z494 1330 aa26.83■■□□□ 1.89
COL9A1-205ENST00000447041 ADAMTS2O95450 1211 aa26.82■■□□□ 1.88
COL9A1-205ENST00000447041 DHX57Q6P158 1386 aaKnown RBP26.82■■□□□ 1.88
COL9A1-205ENST00000447041 RXRBP28702 533 aa26.81■■□□□ 1.88
COL9A1-205ENST00000447041 KIF1AQ12756 1690 aa26.8■■□□□ 1.88
COL9A1-205ENST00000447041 XPCQ01831 940 aaPredicted RBP26.8■■□□□ 1.88
COL9A1-205ENST00000447041 FOXO3O43524 673 aa26.79■■□□□ 1.88
COL9A1-205ENST00000447041 SIRT1Q96EB6 747 aa26.79■■□□□ 1.88
COL9A1-205ENST00000447041 CDK12Q9NYV4 1490 aaPredicted RBP26.79■■□□□ 1.88
COL9A1-205ENST00000447041 ADGRB1O14514 1584 aa26.79■■□□□ 1.88
COL9A1-205ENST00000447041 RGPD8O14715 1765 aaPredicted RBP26.78■■□□□ 1.88
COL9A1-205ENST00000447041 DLC1Q96QB1 1528 aa26.77■■□□□ 1.88
COL9A1-205ENST00000447041 PRAM1Q96QH2 718 aa26.75■■□□□ 1.87
COL9A1-205ENST00000447041 HRCP23327 699 aa26.74■■□□□ 1.87
COL9A1-205ENST00000447041 SAFB2Q14151 953 aaKnown RBP eCLIP26.74■■□□□ 1.87
COL9A1-205ENST00000447041 NGLY1Q96IV0 654 aa26.74■■□□□ 1.87
COL9A1-205ENST00000447041 RGS12O14924 1447 aa26.73■■□□□ 1.87
COL9A1-205ENST00000447041 MARF1Q9Y4F3 1742 aaKnown RBP26.73■■□□□ 1.87
COL9A1-205ENST00000447041 QTRT2Q9H974 415 aaKnown RBP26.73■■□□□ 1.87
COL9A1-205ENST00000447041 KDM2AQ9Y2K7 1162 aa26.72■■□□□ 1.87
COL9A1-205ENST00000447041 ADGRB2O60241 1585 aa26.71■■□□□ 1.87
COL9A1-205ENST00000447041 DCAF11Q8TEB1 546 aa26.71■■□□□ 1.87
COL9A1-205ENST00000447041 USP32Q8NFA0 1604 aa26.7■■□□□ 1.86
COL9A1-205ENST00000447041 RBM6P78332 1123 aaKnown RBP26.68■■□□□ 1.86
COL9A1-205ENST00000447041 USP21Q9UK80 565 aa26.68■■□□□ 1.86
COL9A1-205ENST00000447041 UPF1Q92900 1129 aaKnown RBP eCLIP26.67■■□□□ 1.86
COL9A1-205ENST00000447041 POGKQ9P215 609 aa26.67■■□□□ 1.86
COL9A1-205ENST00000447041 TRAK1Q9UPV9 953 aa26.67■■□□□ 1.86
COL9A1-205ENST00000447041 SPATA31A3Q5VYP0 1347 aa26.65■■□□□ 1.86
COL9A1-205ENST00000447041 FNBP4Q8N3X1 1017 aaPredicted RBP26.65■■□□□ 1.86
COL9A1-205ENST00000447041 PHF8Q9UPP1 1060 aa26.65■■□□□ 1.86
COL9A1-205ENST00000447041 KRT28Q7Z3Y7 464 aa26.64■■□□□ 1.86
COL9A1-205ENST00000447041 ATRNO75882 1429 aa26.63■■□□□ 1.85
COL9A1-205ENST00000447041 TNS3Q68CZ2 1445 aa26.63■■□□□ 1.85
COL9A1-205ENST00000447041 ANKARQ7Z5J8 1434 aa26.63■■□□□ 1.85
COL9A1-205ENST00000447041 ARHGEF28Q8N1W1 1705 aaKnown RBP26.62■■□□□ 1.85
COL9A1-205ENST00000447041 HIRIP3Q9BW71 556 aaPredicted RBP26.62■■□□□ 1.85
COL9A1-205ENST00000447041 TRPC5Q9UL62 973 aaPredicted RBP26.61■■□□□ 1.85
COL9A1-205ENST00000447041 BCL9LQ86UU0 1499 aa26.61■■□□□ 1.85
COL9A1-205ENST00000447041 MINK1Q8N4C8 1332 aaPredicted RBP26.6■■□□□ 1.85
COL9A1-205ENST00000447041 ABCA3Q99758 1704 aa26.59■■□□□ 1.85
COL9A1-205ENST00000447041 STAC3Q96MF2 364 aa26.59■■□□□ 1.85
COL9A1-205ENST00000447041 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.58■■□□□ 1.85
COL9A1-205ENST00000447041 TULP4Q9NRJ4 1543 aa26.58■■□□□ 1.85
COL9A1-205ENST00000447041 PMFBP1Q8TBY8 1022 aa26.57■■□□□ 1.84
COL9A1-205ENST00000447041 SBNO1A3KN83 1393 aa26.56■■□□□ 1.84
COL9A1-205ENST00000447041 TRPM3Q9HCF6 1732 aaPredicted RBP26.56■■□□□ 1.84
COL9A1-205ENST00000447041 PSME1Q06323 249 aa26.55■■□□□ 1.84
COL9A1-205ENST00000447041 PRR36Q9H6K5 1346 aa26.54■■□□□ 1.84
COL9A1-205ENST00000447041 SLIT2O94813 1529 aa26.54■■□□□ 1.84
COL9A1-205ENST00000447041 KIAA1210Q9ULL0 1709 aa26.53■■□□□ 1.84
COL9A1-205ENST00000447041 EIF3AQ14152 1382 aaKnown RBP26.52■■□□□ 1.84
COL9A1-205ENST00000447041 WASLO00401 505 aaPredicted RBP26.51■■□□□ 1.83
COL9A1-205ENST00000447041 PLEKHG5O94827 1062 aa26.51■■□□□ 1.83
COL9A1-205ENST00000447041 CABLES1Q8TDN4 633 aa26.51■■□□□ 1.83
COL9A1-205ENST00000447041 PLCH1Q4KWH8 1693 aa26.5■■□□□ 1.83
COL9A1-205ENST00000447041 ARHGEF10O15013 1369 aa26.5■■□□□ 1.83
COL9A1-205ENST00000447041 LMOD2Q6P5Q4 547 aa26.5■■□□□ 1.83
COL9A1-205ENST00000447041 ALS2Q96Q42 1657 aa26.5■■□□□ 1.83
COL9A1-205ENST00000447041 GLI3P10071 1580 aa26.49■■□□□ 1.83
COL9A1-205ENST00000447041 ITSN1Q15811 1721 aa26.48■■□□□ 1.83
COL9A1-205ENST00000447041 HAP1P54257 671 aaPredicted RBP26.48■■□□□ 1.83
COL9A1-205ENST00000447041 ATP7BP35670 1465 aa26.48■■□□□ 1.83
COL9A1-205ENST00000447041 ATAD2Q6PL18 1390 aa26.46■■□□□ 1.83
COL9A1-205ENST00000447041 UNC5CLQ8IV45 518 aa26.46■■□□□ 1.83
COL9A1-205ENST00000447041 GJD4Q96KN9 370 aaPredicted RBP26.46■■□□□ 1.83
COL9A1-205ENST00000447041 NWD2Q9ULI1 1742 aa26.45■■□□□ 1.83
COL9A1-205ENST00000447041 RALGAPBQ86X10 1494 aa26.45■■□□□ 1.82
COL9A1-205ENST00000447041 GPRASP1Q5JY77 1395 aa26.44■■□□□ 1.82
COL9A1-205ENST00000447041 CRYBG1Q9Y4K1 1723 aa26.42■■□□□ 1.82
COL9A1-205ENST00000447041 TOPAZ1Q8N9V7 1692 aa26.42■■□□□ 1.82
COL9A1-205ENST00000447041 NBPF1Q3BBV0 1214 aa26.41■■□□□ 1.82
COL9A1-205ENST00000447041 NGDNQ8NEJ9 315 aaKnown RBP26.39■■□□□ 1.82
COL9A1-205ENST00000447041 EP400Q96L91 3159 aa26.39■■□□□ 1.81
COL9A1-205ENST00000447041 NRAPQ86VF7 1730 aa26.39■■□□□ 1.81
COL9A1-205ENST00000447041 NUDT16Q96DE0 195 aaKnown RBP26.38■■□□□ 1.81
COL9A1-205ENST00000447041 CDK19Q9BWU1 502 aa26.36■■□□□ 1.81
COL9A1-205ENST00000447041 BRWD3Q6RI45 1802 aa26.36■■□□□ 1.81
COL9A1-205ENST00000447041 FAM83GA6ND36 823 aa26.35■■□□□ 1.81
COL9A1-205ENST00000447041 COL14A1Q05707 1796 aaKnown RBP26.35■■□□□ 1.81
COL9A1-205ENST00000447041 PAK3O75914 559 aaPredicted RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms