RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 PLEKHH1Q9ULM0 1364 aa31.41■■■□□ 2.62
APOE-204ENST00000446996 PRAM1Q96QH2 718 aa31.4■■■□□ 2.62
APOE-204ENST00000446996 ARHGEF28Q8N1W1 1705 aaKnown RBP31.39■■■□□ 2.62
APOE-204ENST00000446996 POGKQ9P215 609 aa31.39■■■□□ 2.62
APOE-204ENST00000446996 GPRASP1Q5JY77 1395 aa31.39■■■□□ 2.62
APOE-204ENST00000446996 PIP4K2BP78356 416 aa31.38■■■□□ 2.61
APOE-204ENST00000446996 ROCK2O75116 1388 aaKnown RBP31.37■■■□□ 2.61
APOE-204ENST00000446996 CDC42BPGQ6DT37 1551 aa31.37■■■□□ 2.61
APOE-204ENST00000446996 RALGAPBQ86X10 1494 aa31.36■■■□□ 2.61
APOE-204ENST00000446996 MST1RQ04912 1400 aa31.34■■■□□ 2.61
APOE-204ENST00000446996 SCAF1Q9H7N4 1312 aaKnown RBP31.34■■■□□ 2.61
APOE-204ENST00000446996 ADGRB2O60241 1585 aa31.3■■■□□ 2.6
APOE-204ENST00000446996 ROBO1Q9Y6N7 1651 aa31.29■■■□□ 2.6
APOE-204ENST00000446996 SAFB2Q14151 953 aaKnown RBP eCLIP31.27■■■□□ 2.6
APOE-204ENST00000446996 DISP3Q9P2K9 1392 aa31.27■■■□□ 2.6
APOE-204ENST00000446996 C1orf167Q5SNV9 1468 aa31.27■■■□□ 2.6
APOE-204ENST00000446996 FMN2Q9NZ56 1722 aa31.25■■■□□ 2.59
APOE-204ENST00000446996 CARD11Q9BXL7 1154 aa31.25■■■□□ 2.59
APOE-204ENST00000446996 CENPJQ9HC77 1338 aaPredicted RBP31.24■■■□□ 2.59
APOE-204ENST00000446996 EIF3AQ14152 1382 aaKnown RBP31.24■■■□□ 2.59
APOE-204ENST00000446996 BRINP3Q76B58 766 aa31.22■■■□□ 2.59
APOE-204ENST00000446996 MINK1Q8N4C8 1332 aaPredicted RBP31.21■■■□□ 2.59
APOE-204ENST00000446996 WASLO00401 505 aaPredicted RBP31.19■■■□□ 2.58
APOE-204ENST00000446996 HSPA1LP34931 641 aa31.19■■■□□ 2.58
APOE-204ENST00000446996 ANKARQ7Z5J8 1434 aa31.16■■■□□ 2.58
APOE-204ENST00000446996 AHDC1Q5TGY3 1603 aaPredicted RBP31.16■■■□□ 2.58
APOE-204ENST00000446996 QRICH2Q9H0J4 1663 aa31.16■■■□□ 2.58
APOE-204ENST00000446996 HIRIP3Q9BW71 556 aaPredicted RBP31.15■■■□□ 2.58
APOE-204ENST00000446996 ORAI2Q96SN7 254 aa31.13■■■□□ 2.57
APOE-204ENST00000446996 SBNO2Q9Y2G9 1366 aa31.12■■■□□ 2.57
APOE-204ENST00000446996 TULP4Q9NRJ4 1543 aa31.12■■■□□ 2.57
APOE-204ENST00000446996 NHSL1Q5SYE7 1610 aa31.12■■■□□ 2.57
APOE-204ENST00000446996 ESCO1Q5FWF5 840 aa31.11■■■□□ 2.57
APOE-204ENST00000446996 PHLPP1O60346 1717 aa31.1■■■□□ 2.57
APOE-204ENST00000446996 ILDR2Q71H61 639 aa31.1■■■□□ 2.57
APOE-204ENST00000446996 RGPD8O14715 1765 aaPredicted RBP31.1■■■□□ 2.57
APOE-204ENST00000446996 CDK19Q9BWU1 502 aa31.09■■■□□ 2.57
APOE-204ENST00000446996 NUTM2FA1L443 756 aa31.08■■■□□ 2.57
APOE-204ENST00000446996 KIF1AQ12756 1690 aa31.08■■■□□ 2.57
APOE-204ENST00000446996 USP32Q8NFA0 1604 aa31.08■■■□□ 2.57
APOE-204ENST00000446996 SLC24A1O60721 1099 aa31.07■■■□□ 2.56
APOE-204ENST00000446996 COL16A1Q07092 1604 aaPredicted RBP31.05■■■□□ 2.56
APOE-204ENST00000446996 EVC2Q86UK5 1308 aa31.04■■■□□ 2.56
APOE-204ENST00000446996 NPHP3Q7Z494 1330 aa31.03■■■□□ 2.56
APOE-204ENST00000446996 PRR36Q9H6K5 1346 aa31.03■■■□□ 2.56
APOE-204ENST00000446996 PHF8Q9UPP1 1060 aa31.03■■■□□ 2.56
APOE-204ENST00000446996 ITSN1Q15811 1721 aa31.02■■■□□ 2.56
APOE-204ENST00000446996 NUDT16Q96DE0 195 aaKnown RBP31.02■■■□□ 2.56
APOE-204ENST00000446996 ATP7BP35670 1465 aa31.01■■■□□ 2.56
APOE-204ENST00000446996 MED1Q15648 1581 aaPredicted RBP31.01■■■□□ 2.56
APOE-204ENST00000446996 SOS2Q07890 1332 aaPredicted RBP31■■■□□ 2.55
APOE-204ENST00000446996 USP47Q96K76 1375 aa31■■■□□ 2.55
APOE-204ENST00000446996 CCDC61Q9Y6R9 512 aa30.99■■■□□ 2.55
APOE-204ENST00000446996 ST20-MTHFSA0A0A6YYL1 179 aa30.98■■■□□ 2.55
APOE-204ENST00000446996 LRRC59Q96AG4 307 aaKnown RBP30.98■■■□□ 2.55
APOE-204ENST00000446996 SRPK2P78362 688 aaKnown RBP30.97■■■□□ 2.55
APOE-204ENST00000446996 JCADQ9P266 1359 aa30.96■■■□□ 2.55
APOE-204ENST00000446996 FOXO3O43524 673 aa30.96■■■□□ 2.55
APOE-204ENST00000446996 PUS7Q96PZ0 661 aaKnown RBP30.96■■■□□ 2.55
APOE-204ENST00000446996 TOPAZ1Q8N9V7 1692 aa30.95■■■□□ 2.55
APOE-204ENST00000446996 TESK2Q96S53 571 aa30.95■■■□□ 2.55
APOE-204ENST00000446996 PLEKHG3A1L390 1219 aa30.94■■■□□ 2.54
APOE-204ENST00000446996 DDX17Q92841 729 aaKnown RBP30.94■■■□□ 2.54
APOE-204ENST00000446996 CABP2Q9NPB3 220 aa30.93■■■□□ 2.54
APOE-204ENST00000446996 PXDNQ92626 1479 aa30.93■■■□□ 2.54
APOE-204ENST00000446996 PSME1Q06323 249 aa30.91■■■□□ 2.54
APOE-204ENST00000446996 PMFBP1Q8TBY8 1022 aa30.91■■■□□ 2.54
APOE-204ENST00000446996 SHPRHQ149N8 1683 aa30.9■■■□□ 2.54
APOE-204ENST00000446996 ATAD2Q6PL18 1390 aa30.9■■■□□ 2.54
APOE-204ENST00000446996 KRT28Q7Z3Y7 464 aa30.89■■■□□ 2.54
APOE-204ENST00000446996 POLR3AO14802 1390 aaPredicted RBP30.88■■■□□ 2.53
APOE-204ENST00000446996 EIF4G2P78344 907 aaKnown RBP eCLIP30.87■■■□□ 2.53
APOE-204ENST00000446996 NGDNQ8NEJ9 315 aaKnown RBP30.87■■■□□ 2.53
APOE-204ENST00000446996 PPIP5K1Q6PFW1 1433 aa30.86■■■□□ 2.53
APOE-204ENST00000446996 SBNO1A3KN83 1393 aa30.85■■■□□ 2.53
APOE-204ENST00000446996 SPATA31A6Q5VVP1 1343 aa30.85■■■□□ 2.53
APOE-204ENST00000446996 TMF1P82094 1093 aa30.84■■■□□ 2.53
APOE-204ENST00000446996 PNPLA6Q8IY17 1366 aa30.82■■■□□ 2.52
APOE-204ENST00000446996 ACEP12821 1306 aa30.82■■■□□ 2.52
APOE-204ENST00000446996 SPATA31A3Q5VYP0 1347 aa30.81■■■□□ 2.52
APOE-204ENST00000446996 SOCS7O14512 581 aa30.81■■■□□ 2.52
APOE-204ENST00000446996 CABP1Q9NZU7 370 aa30.81■■■□□ 2.52
APOE-204ENST00000446996 XPCQ01831 940 aaPredicted RBP30.8■■■□□ 2.52
APOE-204ENST00000446996 CDCA8Q53HL2 280 aa30.8■■■□□ 2.52
APOE-204ENST00000446996 BRD4O60885 1362 aaPredicted RBP30.79■■■□□ 2.52
APOE-204ENST00000446996 TRPM3Q9HCF6 1732 aaPredicted RBP30.78■■■□□ 2.52
APOE-204ENST00000446996 COL22A1Q8NFW1 1626 aaPredicted RBP30.78■■■□□ 2.52
APOE-204ENST00000446996 HSPA5P11021 654 aaKnown RBP30.77■■■□□ 2.52
APOE-204ENST00000446996 TNS3Q68CZ2 1445 aa30.77■■■□□ 2.52
APOE-204ENST00000446996 ZNF692Q9BU19 519 aaPredicted RBP30.76■■■□□ 2.51
APOE-204ENST00000446996 NINLQ9Y2I6 1382 aa30.75■■■□□ 2.51
APOE-204ENST00000446996 ARHGEF10O15013 1369 aa30.74■■■□□ 2.51
APOE-204ENST00000446996 ALS2Q96Q42 1657 aa30.71■■■□□ 2.51
APOE-204ENST00000446996 AKAP12Q02952 1782 aa30.71■■■□□ 2.51
APOE-204ENST00000446996 CPSF1Q10570 1443 aaKnown RBP30.7■■■□□ 2.5
APOE-204ENST00000446996 USP6P35125 1406 aa30.68■■■□□ 2.5
APOE-204ENST00000446996 TMC1Q8TDI8 760 aa30.66■■■□□ 2.5
APOE-204ENST00000446996 PHF23Q9BUL5 403 aaPredicted RBP30.66■■■□□ 2.5
APOE-204ENST00000446996 SLC12A5Q9H2X9 1139 aa30.65■■■□□ 2.5
APOE-204ENST00000446996 SSH2Q76I76 1423 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms