RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 ERCC6L2Q5T890 1561 aa20.86■□□□□ 0.93
HDAC11-214ENST00000446613 NINLQ9Y2I6 1382 aa20.86■□□□□ 0.93
HDAC11-214ENST00000446613 RWDD1Q9H446 243 aaPredicted RBP20.85■□□□□ 0.93
HDAC11-214ENST00000446613 GOLGA6L3A6NEY3 463 aa20.84■□□□□ 0.93
HDAC11-214ENST00000446613 KIF3BO15066 747 aa20.84■□□□□ 0.93
HDAC11-214ENST00000446613 PTPRTO14522 1441 aa20.84■□□□□ 0.93
HDAC11-214ENST00000446613 C22orf23Q9BZE7 217 aa20.83■□□□□ 0.93
HDAC11-214ENST00000446613 SHPRHQ149N8 1683 aa20.83■□□□□ 0.92
HDAC11-214ENST00000446613 PLCH2O75038 1416 aa20.82■□□□□ 0.92
HDAC11-214ENST00000446613 CHGAP10645 457 aaKnown RBP20.82■□□□□ 0.92
HDAC11-214ENST00000446613 MVPQ14764 893 aaKnown RBP20.82■□□□□ 0.92
HDAC11-214ENST00000446613 NGEFQ8N5V2 710 aa20.82■□□□□ 0.92
HDAC11-214ENST00000446613 PHF23Q9BUL5 403 aaPredicted RBP20.81■□□□□ 0.92
HDAC11-214ENST00000446613 SENP3Q9H4L4 574 aaPredicted RBP20.81■□□□□ 0.92
HDAC11-214ENST00000446613 TMEM132EQ6IEE7 984 aa20.81■□□□□ 0.92
HDAC11-214ENST00000446613 FTSJ3Q8IY81 847 aaKnown RBP20.81■□□□□ 0.92
HDAC11-214ENST00000446613 ABCA6Q8N139 1617 aa20.8■□□□□ 0.92
HDAC11-214ENST00000446613 FSD2A1L4K1 749 aa20.8■□□□□ 0.92
HDAC11-214ENST00000446613 TRAK2O60296 914 aa20.8■□□□□ 0.92
HDAC11-214ENST00000446613 U2AF1L5P0DN76 240 aaPredicted RBP20.79■□□□□ 0.92
HDAC11-214ENST00000446613 U2AF1Q01081 240 aaKnown RBP eCLIP20.79■□□□□ 0.92
HDAC11-214ENST00000446613 RTEL1-TNFRSF6BF6WH68 1400 aa20.79■□□□□ 0.92
HDAC11-214ENST00000446613 IQSEC2Q5JU85 1478 aa20.79■□□□□ 0.92
HDAC11-214ENST00000446613 ABCC1P33527 1531 aa20.78■□□□□ 0.92
HDAC11-214ENST00000446613 WDR63Q8IWG1 891 aa20.78■□□□□ 0.92
HDAC11-214ENST00000446613 DZIP1LQ8IYY4 767 aaKnown RBP20.77■□□□□ 0.92
HDAC11-214ENST00000446613 NAP1L5Q96NT1 182 aaPredicted RBP20.77■□□□□ 0.92
HDAC11-214ENST00000446613 ZKSCAN2Q63HK3 967 aa20.76■□□□□ 0.91
HDAC11-214ENST00000446613 ITPRIPQ8IWB1 547 aa20.76■□□□□ 0.91
HDAC11-214ENST00000446613 TRIM27P14373 513 aa20.75■□□□□ 0.91
HDAC11-214ENST00000446613 STAC3Q96MF2 364 aa20.75■□□□□ 0.91
HDAC11-214ENST00000446613 SMC4Q9NTJ3 1288 aa20.75■□□□□ 0.91
HDAC11-214ENST00000446613 CHMP5Q9NZZ3 219 aa20.75■□□□□ 0.91
HDAC11-214ENST00000446613 EXOSC9Q06265 439 aaKnown RBP20.75■□□□□ 0.91
HDAC11-214ENST00000446613 MAP3K4Q9Y6R4 1608 aa20.74■□□□□ 0.91
HDAC11-214ENST00000446613 NUTM2DQ5VT03 806 aaPredicted RBP20.74■□□□□ 0.91
HDAC11-214ENST00000446613 SSH1Q8WYL5 1049 aa20.72■□□□□ 0.91
HDAC11-214ENST00000446613 MYH16Q9H6N6 1097 aa20.72■□□□□ 0.91
HDAC11-214ENST00000446613 FOXD4L1Q9NU39 408 aa20.72■□□□□ 0.91
HDAC11-214ENST00000446613 ZFYVE16Q7Z3T8 1539 aa20.72■□□□□ 0.91
HDAC11-214ENST00000446613 PNNQ9H307 717 aaKnown RBP20.72■□□□□ 0.91
HDAC11-214ENST00000446613 ZNF692Q9BU19 519 aaPredicted RBP20.71■□□□□ 0.91
HDAC11-214ENST00000446613 NOS1P29475 1434 aa20.71■□□□□ 0.91
HDAC11-214ENST00000446613 U2SURPO15042 1029 aaKnown RBP20.7■□□□□ 0.9
HDAC11-214ENST00000446613 SAFB2Q14151 953 aaKnown RBP eCLIP20.7■□□□□ 0.9
HDAC11-214ENST00000446613 KANK1Q14678 1352 aa20.7■□□□□ 0.9
HDAC11-214ENST00000446613 ZNF518AQ6AHZ1 1483 aa20.7■□□□□ 0.9
HDAC11-214ENST00000446613 TET3O43151 1660 aa20.69■□□□□ 0.9
HDAC11-214ENST00000446613 ERBB4Q15303 1308 aa20.69■□□□□ 0.9
HDAC11-214ENST00000446613 AAMPQ13685 434 aa20.69■□□□□ 0.9
HDAC11-214ENST00000446613 HSCBQ8IWL3 235 aa20.69■□□□□ 0.9
HDAC11-214ENST00000446613 LNPKQ9C0E8 428 aa20.69■□□□□ 0.9
HDAC11-214ENST00000446613 NOB1Q9ULX3 412 aaKnown RBP20.69■□□□□ 0.9
HDAC11-214ENST00000446613 KIAA1210Q9ULL0 1709 aa20.69■□□□□ 0.9
HDAC11-214ENST00000446613 CFAP53Q96M91 514 aa20.69■□□□□ 0.9
HDAC11-214ENST00000446613 TMEM57Q8N5G2 664 aa20.68■□□□□ 0.9
HDAC11-214ENST00000446613 CCDC27Q2M243 656 aa20.68■□□□□ 0.9
HDAC11-214ENST00000446613 GRPEL1Q9HAV7 217 aa20.68■□□□□ 0.9
HDAC11-214ENST00000446613 CHD1O14646 1710 aa20.67■□□□□ 0.9
HDAC11-214ENST00000446613 GAS2L3Q86XJ1 694 aa20.67■□□□□ 0.9
HDAC11-214ENST00000446613 MROH2AA6NES4 1674 aa20.67■□□□□ 0.9
HDAC11-214ENST00000446613 CFAP65Q6ZU64 1925 aaKnown RBP20.67■□□□□ 0.9
HDAC11-214ENST00000446613 CLCN1P35523 988 aa20.67■□□□□ 0.9
HDAC11-214ENST00000446613 ZMYM3Q14202 1370 aa20.66■□□□□ 0.9
HDAC11-214ENST00000446613 SHROOM2Q13796 1616 aa20.66■□□□□ 0.9
HDAC11-214ENST00000446613 SLC24A1O60721 1099 aa20.65■□□□□ 0.9
HDAC11-214ENST00000446613 MYOM2P54296 1465 aa20.65■□□□□ 0.9
HDAC11-214ENST00000446613 CD2BP2O95400 341 aaKnown RBP20.65■□□□□ 0.9
HDAC11-214ENST00000446613 MRE11P49959 708 aa20.65■□□□□ 0.9
HDAC11-214ENST00000446613 ATF7IPQ6VMQ6 1270 aa20.65■□□□□ 0.9
HDAC11-214ENST00000446613 TNPO1Q92973 898 aaKnown RBP20.65■□□□□ 0.9
HDAC11-214ENST00000446613 CABP2Q9NPB3 220 aa20.65■□□□□ 0.9
HDAC11-214ENST00000446613 DEPDC5O75140 1603 aa20.64■□□□□ 0.9
HDAC11-214ENST00000446613 ZCCHC11Q5TAX3 1644 aaKnown RBP20.64■□□□□ 0.9
HDAC11-214ENST00000446613 TRIM35Q9UPQ4 493 aa20.64■□□□□ 0.9
HDAC11-214ENST00000446613 HDAC1Q13547 482 aaPredicted RBP20.64■□□□□ 0.89
HDAC11-214ENST00000446613 CD109Q6YHK3 1445 aa20.63■□□□□ 0.89
HDAC11-214ENST00000446613 SMC5Q8IY18 1101 aa20.63■□□□□ 0.89
HDAC11-214ENST00000446613 GGNBP2Q9H3C7 697 aa20.63■□□□□ 0.89
HDAC11-214ENST00000446613 SBNO2Q9Y2G9 1366 aa20.62■□□□□ 0.89
HDAC11-214ENST00000446613 RBM42Q9BTD8 480 aaKnown RBP20.62■□□□□ 0.89
HDAC11-214ENST00000446613 DDX19BQ9UMR2 479 aa20.62■□□□□ 0.89
HDAC11-214ENST00000446613 TMPOP42166 694 aaKnown RBP20.62■□□□□ 0.89
HDAC11-214ENST00000446613 DDIT3P35638 169 aa20.61■□□□□ 0.89
HDAC11-214ENST00000446613 C1orf115Q9H7X2 142 aa20.61■□□□□ 0.89
HDAC11-214ENST00000446613 ZBTB40Q9NUA8 1239 aa20.61■□□□□ 0.89
HDAC11-214ENST00000446613 KIF1BO60333 1816 aa20.6■□□□□ 0.89
HDAC11-214ENST00000446613 ATP7AQ04656 1500 aa20.6■□□□□ 0.89
HDAC11-214ENST00000446613 DDX11L8A8MPP1 907 aa20.6■□□□□ 0.89
HDAC11-214ENST00000446613 HSP90AB1P08238 724 aaKnown RBP20.59■□□□□ 0.89
HDAC11-214ENST00000446613 PLEKHF1Q96S99 279 aa20.59■□□□□ 0.89
HDAC11-214ENST00000446613 VWDEQ8N2E2 1590 aa20.59■□□□□ 0.89
HDAC11-214ENST00000446613 QRICH2Q9H0J4 1663 aa20.59■□□□□ 0.89
HDAC11-214ENST00000446613 ESPNB1AK53 854 aa20.59■□□□□ 0.89
HDAC11-214ENST00000446613 MYO3AQ8NEV4 1616 aa20.58■□□□□ 0.89
HDAC11-214ENST00000446613 C14orf93Q9H972 538 aaKnown RBP20.58■□□□□ 0.89
HDAC11-214ENST00000446613 MROH1Q8NDA8 1641 aa20.57■□□□□ 0.88
HDAC11-214ENST00000446613 KIF2CQ99661 725 aa20.57■□□□□ 0.88
HDAC11-214ENST00000446613 IFT172Q9UG01 1749 aa20.57■□□□□ 0.88
HDAC11-214ENST00000446613 RBM25P49756 843 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms