RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 DAPK1P53355 1430 aa9.05□□□□□ -0.96
LINC01880-201ENST00000446593 VPS8Q8N3P4 1428 aa9.05□□□□□ -0.96
LINC01880-201ENST00000446593 CFAP65Q6ZU64 1925 aaKnown RBP9.05□□□□□ -0.96
LINC01880-201ENST00000446593 RPRD2Q5VT52 1461 aaKnown RBP9.05□□□□□ -0.96
LINC01880-201ENST00000446593 ADAMTS2O95450 1211 aa9.05□□□□□ -0.96
LINC01880-201ENST00000446593 TRPC5Q9UL62 973 aaPredicted RBP9.05□□□□□ -0.96
LINC01880-201ENST00000446593 RGS12O14924 1447 aa9.05□□□□□ -0.96
LINC01880-201ENST00000446593 DCCP43146 1447 aa9.05□□□□□ -0.96
LINC01880-201ENST00000446593 USP21Q9UK80 565 aa9.04□□□□□ -0.96
LINC01880-201ENST00000446593 ADAMTS13Q76LX8 1427 aa9.04□□□□□ -0.96
LINC01880-201ENST00000446593 POTEB2H3BUK9 544 aa9.03□□□□□ -0.96
LINC01880-201ENST00000446593 SHPRHQ149N8 1683 aa9.02□□□□□ -0.97
LINC01880-201ENST00000446593 DDX17Q92841 729 aaKnown RBP9.02□□□□□ -0.97
LINC01880-201ENST00000446593 PNPLA6Q8IY17 1366 aa9.01□□□□□ -0.97
LINC01880-201ENST00000446593 PRR29P0C7W0 189 aa9.01□□□□□ -0.97
LINC01880-201ENST00000446593 FNBP4Q8N3X1 1017 aaPredicted RBP9.01□□□□□ -0.97
LINC01880-201ENST00000446593 ANKRD50Q9ULJ7 1429 aa9.01□□□□□ -0.97
LINC01880-201ENST00000446593 MST1RQ04912 1400 aa9□□□□□ -0.97
LINC01880-201ENST00000446593 FAM50AQ14320 339 aaKnown RBP9□□□□□ -0.97
LINC01880-201ENST00000446593 ASXL1Q8IXJ9 1541 aa9□□□□□ -0.97
LINC01880-201ENST00000446593 DIP2AQ14689 1571 aa8.99□□□□□ -0.97
LINC01880-201ENST00000446593 CHD2O14647 1828 aaKnown RBP8.99□□□□□ -0.97
LINC01880-201ENST00000446593 ZNF326Q5BKZ1 582 aaKnown RBP8.99□□□□□ -0.97
LINC01880-201ENST00000446593 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.99□□□□□ -0.97
LINC01880-201ENST00000446593 TRPM2O94759 1503 aa8.99□□□□□ -0.97
LINC01880-201ENST00000446593 PTPRUQ92729 1446 aa8.98□□□□□ -0.97
LINC01880-201ENST00000446593 PTPN23Q9H3S7 1636 aa8.98□□□□□ -0.97
LINC01880-201ENST00000446593 LOC105371045A0A1W2PR82 267 aa8.97□□□□□ -0.97
LINC01880-201ENST00000446593 SF3B2Q13435 895 aaKnown RBP8.97□□□□□ -0.97
LINC01880-201ENST00000446593 SSUH2Q9Y2M2 353 aa8.97□□□□□ -0.97
LINC01880-201ENST00000446593 SOS2Q07890 1332 aaPredicted RBP8.97□□□□□ -0.97
LINC01880-201ENST00000446593 TMEM131LA2VDJ0 1609 aa8.97□□□□□ -0.97
LINC01880-201ENST00000446593 GJD4Q96KN9 370 aaPredicted RBP8.96□□□□□ -0.98
LINC01880-201ENST00000446593 FARP1Q9Y4F1 1045 aaPredicted RBP8.96□□□□□ -0.98
LINC01880-201ENST00000446593 METP08581 1390 aa8.96□□□□□ -0.98
LINC01880-201ENST00000446593 PTCH1Q13635 1447 aa8.96□□□□□ -0.98
LINC01880-201ENST00000446593 ADGRL3Q9HAR2 1447 aa8.96□□□□□ -0.98
LINC01880-201ENST00000446593 ADGRL2O95490 1459 aa8.96□□□□□ -0.98
LINC01880-201ENST00000446593 ZNF579Q8NAF0 562 aaKnown RBP8.95□□□□□ -0.98
LINC01880-201ENST00000446593 ORAI2Q96SN7 254 aa8.95□□□□□ -0.98
LINC01880-201ENST00000446593 ZNF692Q9BU19 519 aaPredicted RBP8.95□□□□□ -0.98
LINC01880-201ENST00000446593 ATRNO75882 1429 aa8.94□□□□□ -0.98
LINC01880-201ENST00000446593 C1orf167Q5SNV9 1468 aa8.94□□□□□ -0.98
LINC01880-201ENST00000446593 NPHP3Q7Z494 1330 aa8.93□□□□□ -0.98
LINC01880-201ENST00000446593 NUP155O75694 1391 aa8.93□□□□□ -0.98
LINC01880-201ENST00000446593 SETBP1Q9Y6X0 1596 aa8.93□□□□□ -0.98
LINC01880-201ENST00000446593 CROCC2H7BZ55 1655 aa8.93□□□□□ -0.98
LINC01880-201ENST00000446593 BLMP54132 1417 aaPredicted RBP8.92□□□□□ -0.98
LINC01880-201ENST00000446593 VGFO15240 615 aaPredicted RBP8.92□□□□□ -0.98
LINC01880-201ENST00000446593 ESCO1Q5FWF5 840 aa8.92□□□□□ -0.98
LINC01880-201ENST00000446593 DEFB132Q7Z7B7 95 aa8.91□□□□□ -0.98
LINC01880-201ENST00000446593 UNC5CLQ8IV45 518 aa8.91□□□□□ -0.98
LINC01880-201ENST00000446593 GCC2Q8IWJ2 1684 aa8.91□□□□□ -0.98
LINC01880-201ENST00000446593 NHSL1Q5SYE7 1610 aa8.91□□□□□ -0.98
LINC01880-201ENST00000446593 BCL9LQ86UU0 1499 aa8.9□□□□□ -0.98
LINC01880-201ENST00000446593 LRPPRCP42704 1394 aaKnown RBP8.9□□□□□ -0.98
LINC01880-201ENST00000446593 FOXO3O43524 673 aa8.9□□□□□ -0.98
LINC01880-201ENST00000446593 UNC13BO14795 1591 aa8.89□□□□□ -0.99
LINC01880-201ENST00000446593 ROCK1Q13464 1354 aa8.88□□□□□ -0.99
LINC01880-201ENST00000446593 EP400Q96L91 3159 aa8.88□□□□□ -0.99
LINC01880-201ENST00000446593 BAG6P46379 1132 aa8.88□□□□□ -0.99
LINC01880-201ENST00000446593 HAP1P54257 671 aaPredicted RBP8.88□□□□□ -0.99
LINC01880-201ENST00000446593 LCE2DQ5TA82 110 aaPredicted RBP8.88□□□□□ -0.99
LINC01880-201ENST00000446593 SEPT12Q8IYM1 358 aa8.88□□□□□ -0.99
LINC01880-201ENST00000446593 XPCQ01831 940 aaPredicted RBP8.87□□□□□ -0.99
LINC01880-201ENST00000446593 KRT27Q7Z3Y8 459 aa8.87□□□□□ -0.99
LINC01880-201ENST00000446593 CCDC9Q9Y3X0 531 aaKnown RBP8.87□□□□□ -0.99
LINC01880-201ENST00000446593 XRN1Q8IZH2 1706 aaKnown RBP8.87□□□□□ -0.99
LINC01880-201ENST00000446593 MYOM2P54296 1465 aa8.87□□□□□ -0.99
LINC01880-201ENST00000446593 ROBO2Q9HCK4 1378 aa8.86□□□□□ -0.99
LINC01880-201ENST00000446593 GALR2O43603 387 aaPredicted RBP8.86□□□□□ -0.99
LINC01880-201ENST00000446593 ONECUT3O60422 494 aaPredicted RBP8.86□□□□□ -0.99
LINC01880-201ENST00000446593 HRCP23327 699 aa8.86□□□□□ -0.99
LINC01880-201ENST00000446593 HFM1A2PYH4 1435 aa8.86□□□□□ -0.99
LINC01880-201ENST00000446593 RPGRIP1LQ68CZ1 1315 aa8.85□□□□□ -0.99
LINC01880-201ENST00000446593 MYO5BQ9ULV0 1848 aa8.85□□□□□ -0.99
LINC01880-201ENST00000446593 RALGAPBQ86X10 1494 aa8.85□□□□□ -0.99
LINC01880-201ENST00000446593 A0A0G2JS52 829 aa8.85□□□□□ -0.99
LINC01880-201ENST00000446593 PSDA5PKW4 1024 aaPredicted RBP8.85□□□□□ -0.99
LINC01880-201ENST00000446593 ITGAEP38570 1179 aa8.85□□□□□ -0.99
LINC01880-201ENST00000446593 MYT1Q01538 1121 aa8.85□□□□□ -0.99
LINC01880-201ENST00000446593 VPS72Q15906 364 aa8.85□□□□□ -0.99
LINC01880-201ENST00000446593 FAM163AQ96GL9 167 aaPredicted RBP8.85□□□□□ -0.99
LINC01880-201ENST00000446593 FOXD4L1Q9NU39 408 aa8.85□□□□□ -0.99
LINC01880-201ENST00000446593 PSME1Q06323 249 aa8.84□□□□□ -0.99
LINC01880-201ENST00000446593 MAMSTRQ6ZN01 415 aa8.84□□□□□ -0.99
LINC01880-201ENST00000446593 E9PCH4 1651 aa8.84□□□□□ -0.99
LINC01880-201ENST00000446593 SPATA31A3Q5VYP0 1347 aa8.83□□□□□ -1
LINC01880-201ENST00000446593 NUTM2FA1L443 756 aa8.83□□□□□ -1
LINC01880-201ENST00000446593 KRT28Q7Z3Y7 464 aa8.83□□□□□ -1
LINC01880-201ENST00000446593 LAMC1P11047 1609 aa8.83□□□□□ -1
LINC01880-201ENST00000446593 NRXN3Q9Y4C0 1643 aa8.83□□□□□ -1
LINC01880-201ENST00000446593 SLIT2O94813 1529 aa8.82□□□□□ -1
LINC01880-201ENST00000446593 IQGAP3Q86VI3 1631 aa8.82□□□□□ -1
LINC01880-201ENST00000446593 PXDNQ92626 1479 aa8.82□□□□□ -1
LINC01880-201ENST00000446593 COL22A1Q8NFW1 1626 aaPredicted RBP8.81□□□□□ -1
LINC01880-201ENST00000446593 YY1P25490 414 aa8.81□□□□□ -1
LINC01880-201ENST00000446593 EN1Q05925 392 aaPredicted RBP8.81□□□□□ -1
LINC01880-201ENST00000446593 R3HDM1Q15032 1099 aaKnown RBP8.81□□□□□ -1
LINC01880-201ENST00000446593 LMOD2Q6P5Q4 547 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms