RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
CDCA3-203ENST00000446553 DHX57Q6P158 1386 aaKnown RBP16.57■□□□□ 0.24
CDCA3-203ENST00000446553 TMEM132EQ6IEE7 984 aa16.57■□□□□ 0.24
CDCA3-203ENST00000446553 POTEAQ6S8J7 498 aa16.57■□□□□ 0.24
CDCA3-203ENST00000446553 PNPLA6Q8IY17 1366 aa16.55■□□□□ 0.24
CDCA3-203ENST00000446553 ZNF772Q68DY9 489 aaPredicted RBP16.55■□□□□ 0.24
CDCA3-203ENST00000446553 ORAI2Q96SN7 254 aa16.55■□□□□ 0.24
CDCA3-203ENST00000446553 STK26Q9P289 416 aa16.55■□□□□ 0.24
CDCA3-203ENST00000446553 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
CDCA3-203ENST00000446553 CFAP70Q5T0N1 1121 aa16.54■□□□□ 0.24
CDCA3-203ENST00000446553 WAPLQ7Z5K2 1190 aa16.54■□□□□ 0.24
CDCA3-203ENST00000446553 NPHP3Q7Z494 1330 aa16.53■□□□□ 0.24
CDCA3-203ENST00000446553 MEX3CQ5U5Q3 659 aaKnown RBP16.53■□□□□ 0.24
CDCA3-203ENST00000446553 PLEKHH1Q9ULM0 1364 aa16.52■□□□□ 0.24
CDCA3-203ENST00000446553 DDX17Q92841 729 aaKnown RBP16.52■□□□□ 0.24
CDCA3-203ENST00000446553 ADGRB1O14514 1584 aa16.51■□□□□ 0.23
CDCA3-203ENST00000446553 FMN2Q9NZ56 1722 aa16.51■□□□□ 0.23
CDCA3-203ENST00000446553 ESCO1Q5FWF5 840 aa16.5■□□□□ 0.23
CDCA3-203ENST00000446553 COL22A1Q8NFW1 1626 aaPredicted RBP16.49■□□□□ 0.23
CDCA3-203ENST00000446553 DCAF11Q8TEB1 546 aa16.49■□□□□ 0.23
CDCA3-203ENST00000446553 PXDNQ92626 1479 aa16.48■□□□□ 0.23
CDCA3-203ENST00000446553 KIF1AQ12756 1690 aa16.48■□□□□ 0.23
CDCA3-203ENST00000446553 NUTM2BA6NNL0 878 aaPredicted RBP16.47■□□□□ 0.23
CDCA3-203ENST00000446553 NUTM2EB1AL46 878 aaPredicted RBP16.47■□□□□ 0.23
CDCA3-203ENST00000446553 NUTM2AQ8IVF1 878 aaPredicted RBP16.47■□□□□ 0.23
CDCA3-203ENST00000446553 ADGRB2O60241 1585 aa16.47■□□□□ 0.23
CDCA3-203ENST00000446553 PRAM1Q96QH2 718 aa16.46■□□□□ 0.23
CDCA3-203ENST00000446553 CDK12Q9NYV4 1490 aaPredicted RBP16.46■□□□□ 0.23
CDCA3-203ENST00000446553 ANKARQ7Z5J8 1434 aa16.45■□□□□ 0.22
CDCA3-203ENST00000446553 AFF2P51816 1311 aa16.45■□□□□ 0.22
CDCA3-203ENST00000446553 FOXO3O43524 673 aa16.44■□□□□ 0.22
CDCA3-203ENST00000446553 KDM2AQ9Y2K7 1162 aa16.44■□□□□ 0.22
CDCA3-203ENST00000446553 POGKQ9P215 609 aa16.43■□□□□ 0.22
CDCA3-203ENST00000446553 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
CDCA3-203ENST00000446553 EIF3AQ14152 1382 aaKnown RBP16.42■□□□□ 0.22
CDCA3-203ENST00000446553 RXRBP28702 533 aa16.42■□□□□ 0.22
CDCA3-203ENST00000446553 NUTM2FA1L443 756 aa16.41■□□□□ 0.22
CDCA3-203ENST00000446553 C8orf37Q96NL8 207 aa16.41■□□□□ 0.22
CDCA3-203ENST00000446553 PHF8Q9UPP1 1060 aa16.41■□□□□ 0.22
CDCA3-203ENST00000446553 FNBP4Q8N3X1 1017 aaPredicted RBP16.4■□□□□ 0.22
CDCA3-203ENST00000446553 TRAK1Q9UPV9 953 aa16.4■□□□□ 0.22
CDCA3-203ENST00000446553 RGPD8O14715 1765 aaPredicted RBP16.4■□□□□ 0.22
CDCA3-203ENST00000446553 SPATA31A3Q5VYP0 1347 aa16.4■□□□□ 0.22
CDCA3-203ENST00000446553 NGLY1Q96IV0 654 aa16.39■□□□□ 0.21
CDCA3-203ENST00000446553 SBNO1A3KN83 1393 aa16.38■□□□□ 0.21
CDCA3-203ENST00000446553 RBM6P78332 1123 aaKnown RBP16.38■□□□□ 0.21
CDCA3-203ENST00000446553 PSME1Q06323 249 aa16.38■□□□□ 0.21
CDCA3-203ENST00000446553 SAFB2Q14151 953 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDCA3-203ENST00000446553 KRT28Q7Z3Y7 464 aa16.38■□□□□ 0.21
CDCA3-203ENST00000446553 USP32Q8NFA0 1604 aa16.37■□□□□ 0.21
CDCA3-203ENST00000446553 ARHGEF28Q8N1W1 1705 aaKnown RBP16.37■□□□□ 0.21
CDCA3-203ENST00000446553 MARF1Q9Y4F3 1742 aaKnown RBP16.37■□□□□ 0.21
CDCA3-203ENST00000446553 TULP4Q9NRJ4 1543 aa16.37■□□□□ 0.21
CDCA3-203ENST00000446553 ADAMTS2O95450 1211 aa16.37■□□□□ 0.21
CDCA3-203ENST00000446553 QTRT2Q9H974 415 aaKnown RBP16.37■□□□□ 0.21
CDCA3-203ENST00000446553 TNS3Q68CZ2 1445 aa16.36■□□□□ 0.21
CDCA3-203ENST00000446553 WASLO00401 505 aaPredicted RBP16.36■□□□□ 0.21
CDCA3-203ENST00000446553 XPCQ01831 940 aaPredicted RBP16.36■□□□□ 0.21
CDCA3-203ENST00000446553 USP21Q9UK80 565 aa16.34■□□□□ 0.21
CDCA3-203ENST00000446553 TRPC5Q9UL62 973 aaPredicted RBP16.34■□□□□ 0.21
CDCA3-203ENST00000446553 ARHGEF10O15013 1369 aa16.34■□□□□ 0.21
CDCA3-203ENST00000446553 MINK1Q8N4C8 1332 aaPredicted RBP16.33■□□□□ 0.2
CDCA3-203ENST00000446553 ATRNO75882 1429 aa16.33■□□□□ 0.2
CDCA3-203ENST00000446553 PRR36Q9H6K5 1346 aa16.32■□□□□ 0.2
CDCA3-203ENST00000446553 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.31■□□□□ 0.2
CDCA3-203ENST00000446553 BCL9LQ86UU0 1499 aa16.31■□□□□ 0.2
CDCA3-203ENST00000446553 HIRIP3Q9BW71 556 aaPredicted RBP16.31■□□□□ 0.2
CDCA3-203ENST00000446553 RGS12O14924 1447 aa16.3■□□□□ 0.2
CDCA3-203ENST00000446553 GPRASP1Q5JY77 1395 aa16.3■□□□□ 0.2
CDCA3-203ENST00000446553 ITSN1Q15811 1721 aa16.3■□□□□ 0.2
CDCA3-203ENST00000446553 TRPM3Q9HCF6 1732 aaPredicted RBP16.3■□□□□ 0.2
CDCA3-203ENST00000446553 SLIT2O94813 1529 aa16.29■□□□□ 0.2
CDCA3-203ENST00000446553 ATP7BP35670 1465 aa16.29■□□□□ 0.2
CDCA3-203ENST00000446553 PMFBP1Q8TBY8 1022 aa16.29■□□□□ 0.2
CDCA3-203ENST00000446553 UPF1Q92900 1129 aaKnown RBP eCLIP16.28■□□□□ 0.2
CDCA3-203ENST00000446553 L3MBTL2Q969R5 705 aa16.28■□□□□ 0.2
CDCA3-203ENST00000446553 ALS2Q96Q42 1657 aa16.27■□□□□ 0.2
CDCA3-203ENST00000446553 NBPF1Q3BBV0 1214 aa16.27■□□□□ 0.2
CDCA3-203ENST00000446553 ABCA3Q99758 1704 aa16.26■□□□□ 0.19
CDCA3-203ENST00000446553 UNC5CLQ8IV45 518 aa16.26■□□□□ 0.19
CDCA3-203ENST00000446553 NUDT16Q96DE0 195 aaKnown RBP16.26■□□□□ 0.19
CDCA3-203ENST00000446553 NWD2Q9ULI1 1742 aa16.25■□□□□ 0.19
CDCA3-203ENST00000446553 NGDNQ8NEJ9 315 aaKnown RBP16.25■□□□□ 0.19
CDCA3-203ENST00000446553 CDK19Q9BWU1 502 aa16.25■□□□□ 0.19
CDCA3-203ENST00000446553 POLR3AO14802 1390 aaPredicted RBP16.25■□□□□ 0.19
CDCA3-203ENST00000446553 TOPAZ1Q8N9V7 1692 aa16.24■□□□□ 0.19
CDCA3-203ENST00000446553 CENPJQ9HC77 1338 aaPredicted RBP16.24■□□□□ 0.19
CDCA3-203ENST00000446553 PLEKHG3A1L390 1219 aa16.24■□□□□ 0.19
CDCA3-203ENST00000446553 GJD4Q96KN9 370 aaPredicted RBP16.24■□□□□ 0.19
CDCA3-203ENST00000446553 CCDC61Q9Y6R9 512 aa16.24■□□□□ 0.19
CDCA3-203ENST00000446553 HAP1P54257 671 aaPredicted RBP16.23■□□□□ 0.19
CDCA3-203ENST00000446553 SIN3AQ96ST3 1273 aa16.23■□□□□ 0.19
CDCA3-203ENST00000446553 LMOD2Q6P5Q4 547 aa16.22■□□□□ 0.19
CDCA3-203ENST00000446553 TRPM1Q7Z4N2 1603 aa16.22■□□□□ 0.19
CDCA3-203ENST00000446553 CABLES1Q8TDN4 633 aa16.21■□□□□ 0.19
CDCA3-203ENST00000446553 ATAD2Q6PL18 1390 aa16.21■□□□□ 0.19
CDCA3-203ENST00000446553 VPS72Q15906 364 aa16.2■□□□□ 0.18
CDCA3-203ENST00000446553 BRD4O60885 1362 aaPredicted RBP16.2■□□□□ 0.18
CDCA3-203ENST00000446553 PLCH1Q4KWH8 1693 aa16.2■□□□□ 0.18
CDCA3-203ENST00000446553 CRYBG1Q9Y4K1 1723 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms