RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 PRAG1Q86YV5 1406 aa35.85■■■■□ 3.33
NUP50-211ENST00000445721 ZRANB1Q9UGI0 708 aa35.85■■■■□ 3.33
NUP50-211ENST00000445721 NAIPQ13075 1403 aa35.84■■■■□ 3.33
NUP50-211ENST00000445721 FOXD1Q16676 465 aa35.84■■■■□ 3.33
NUP50-211ENST00000445721 COL22A1Q8NFW1 1626 aaPredicted RBP35.83■■■■□ 3.33
NUP50-211ENST00000445721 MYOM2P54296 1465 aa35.81■■■■□ 3.32
NUP50-211ENST00000445721 XPCQ01831 940 aaPredicted RBP35.81■■■■□ 3.32
NUP50-211ENST00000445721 EP400Q96L91 3159 aa35.8■■■■□ 3.32
NUP50-211ENST00000445721 FOXO3O43524 673 aa35.8■■■■□ 3.32
NUP50-211ENST00000445721 BCL9LQ86UU0 1499 aa35.78■■■■□ 3.32
NUP50-211ENST00000445721 SLC4A1APQ9BWU0 796 aaKnown RBP35.77■■■■□ 3.32
NUP50-211ENST00000445721 CCDC125Q86Z20 511 aa35.76■■■■□ 3.32
NUP50-211ENST00000445721 PXDNQ92626 1479 aa35.75■■■■□ 3.31
NUP50-211ENST00000445721 NUTM2FA1L443 756 aa35.74■■■■□ 3.31
NUP50-211ENST00000445721 GJD4Q96KN9 370 aaPredicted RBP35.74■■■■□ 3.31
NUP50-211ENST00000445721 STK26Q9P289 416 aa35.73■■■■□ 3.31
NUP50-211ENST00000445721 CDC42BPGQ6DT37 1551 aa35.72■■■■□ 3.31
NUP50-211ENST00000445721 PPLO60437 1756 aa35.72■■■■□ 3.31
NUP50-211ENST00000445721 LRPPRCP42704 1394 aaKnown RBP35.7■■■■□ 3.31
NUP50-211ENST00000445721 WAPLQ7Z5K2 1190 aa35.7■■■■□ 3.31
NUP50-211ENST00000445721 RRBP1Q9P2E9 1410 aaKnown RBP35.69■■■■□ 3.3
NUP50-211ENST00000445721 ADGRF5Q8IZF2 1346 aa35.67■■■■□ 3.3
NUP50-211ENST00000445721 MARF1Q9Y4F3 1742 aaKnown RBP35.66■■■■□ 3.3
NUP50-211ENST00000445721 UNC5CLQ8IV45 518 aa35.64■■■■□ 3.3
NUP50-211ENST00000445721 RGL3Q3MIN7 710 aa35.62■■■■□ 3.29
NUP50-211ENST00000445721 TMEM132EQ6IEE7 984 aa35.59■■■■□ 3.29
NUP50-211ENST00000445721 SPATA31A3Q5VYP0 1347 aa35.58■■■■□ 3.29
NUP50-211ENST00000445721 TECPR2O15040 1411 aa35.57■■■■□ 3.29
NUP50-211ENST00000445721 RALGAPBQ86X10 1494 aa35.57■■■■□ 3.28
NUP50-211ENST00000445721 PLEKHH1Q9ULM0 1364 aa35.57■■■■□ 3.28
NUP50-211ENST00000445721 ABCC11Q96J66 1382 aa35.55■■■■□ 3.28
NUP50-211ENST00000445721 KRT28Q7Z3Y7 464 aa35.55■■■■□ 3.28
NUP50-211ENST00000445721 SLIT2O94813 1529 aa35.55■■■■□ 3.28
NUP50-211ENST00000445721 GLI3P10071 1580 aa35.53■■■■□ 3.28
NUP50-211ENST00000445721 BLMP54132 1417 aaPredicted RBP35.53■■■■□ 3.28
NUP50-211ENST00000445721 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.53■■■■□ 3.28
NUP50-211ENST00000445721 CCDC144AA2RUR9 1427 aa35.52■■■■□ 3.28
NUP50-211ENST00000445721 ANKRD30BQ9BXX2 1392 aa35.51■■■■□ 3.28
NUP50-211ENST00000445721 HAP1P54257 671 aaPredicted RBP35.51■■■■□ 3.28
NUP50-211ENST00000445721 DEFB132Q7Z7B7 95 aa35.49■■■■□ 3.27
NUP50-211ENST00000445721 PLEKHG5O94827 1062 aa35.48■■■■□ 3.27
NUP50-211ENST00000445721 SEPT12Q8IYM1 358 aa35.48■■■■□ 3.27
NUP50-211ENST00000445721 SPATA31E1Q6ZUB1 1445 aa35.48■■■■□ 3.27
NUP50-211ENST00000445721 FMN2Q9NZ56 1722 aa35.46■■■■□ 3.27
NUP50-211ENST00000445721 SF3B2Q13435 895 aaKnown RBP35.46■■■■□ 3.27
NUP50-211ENST00000445721 CABLES1Q8TDN4 633 aa35.46■■■■□ 3.27
NUP50-211ENST00000445721 KIF1AQ12756 1690 aa35.45■■■■□ 3.27
NUP50-211ENST00000445721 USP32Q8NFA0 1604 aa35.44■■■■□ 3.26
NUP50-211ENST00000445721 YTHDC2Q9H6S0 1430 aaKnown RBP35.44■■■■□ 3.26
NUP50-211ENST00000445721 PHF8Q9UPP1 1060 aa35.44■■■■□ 3.26
NUP50-211ENST00000445721 CCDC9Q9Y3X0 531 aaKnown RBP35.44■■■■□ 3.26
NUP50-211ENST00000445721 PSME1Q06323 249 aa35.43■■■■□ 3.26
NUP50-211ENST00000445721 VPS72Q15906 364 aa35.43■■■■□ 3.26
NUP50-211ENST00000445721 BRWD3Q6RI45 1802 aa35.43■■■■□ 3.26
NUP50-211ENST00000445721 KNDC1Q76NI1 1749 aa35.43■■■■□ 3.26
NUP50-211ENST00000445721 PIK3C2GO75747 1445 aa35.41■■■■□ 3.26
NUP50-211ENST00000445721 LMOD2Q6P5Q4 547 aa35.41■■■■□ 3.26
NUP50-211ENST00000445721 TNS3Q68CZ2 1445 aa35.4■■■■□ 3.26
NUP50-211ENST00000445721 SIRT1Q96EB6 747 aa35.4■■■■□ 3.26
NUP50-211ENST00000445721 IFT172Q9UG01 1749 aa35.38■■■■□ 3.25
NUP50-211ENST00000445721 MPHOSPH9Q99550 1183 aa35.38■■■■□ 3.25
NUP50-211ENST00000445721 ONECUT3O60422 494 aaPredicted RBP35.36■■■■□ 3.25
NUP50-211ENST00000445721 KRT27Q7Z3Y8 459 aa35.36■■■■□ 3.25
NUP50-211ENST00000445721 C14orf93Q9H972 538 aaKnown RBP35.34■■■■□ 3.25
NUP50-211ENST00000445721 RGPD8O14715 1765 aaPredicted RBP35.33■■■■□ 3.25
NUP50-211ENST00000445721 SAFB2Q14151 953 aaKnown RBP eCLIP35.33■■■■□ 3.25
NUP50-211ENST00000445721 SBNO1A3KN83 1393 aa35.32■■■■□ 3.24
NUP50-211ENST00000445721 A0A0G2JS52 829 aa35.3■■■■□ 3.24
NUP50-211ENST00000445721 FAM83GA6ND36 823 aa35.3■■■■□ 3.24
NUP50-211ENST00000445721 MYT1Q01538 1121 aa35.3■■■■□ 3.24
NUP50-211ENST00000445721 ARHGEF10O15013 1369 aa35.29■■■■□ 3.24
NUP50-211ENST00000445721 DHX57Q6P158 1386 aaKnown RBP35.29■■■■□ 3.24
NUP50-211ENST00000445721 CFAP70Q5T0N1 1121 aa35.29■■■■□ 3.24
NUP50-211ENST00000445721 PLCH1Q4KWH8 1693 aa35.28■■■■□ 3.24
NUP50-211ENST00000445721 PRAM1Q96QH2 718 aa35.28■■■■□ 3.24
NUP50-211ENST00000445721 NRXN1Q9ULB1 1477 aa35.28■■■■□ 3.24
NUP50-211ENST00000445721 NWD2Q9ULI1 1742 aa35.27■■■■□ 3.24
NUP50-211ENST00000445721 PMFBP1Q8TBY8 1022 aa35.26■■■■□ 3.24
NUP50-211ENST00000445721 BAG6P46379 1132 aa35.23■■■■□ 3.23
NUP50-211ENST00000445721 POGKQ9P215 609 aa35.23■■■■□ 3.23
NUP50-211ENST00000445721 PSDA5PKW4 1024 aaPredicted RBP35.22■■■■□ 3.23
NUP50-211ENST00000445721 FAM98CQ17RN3 349 aaKnown RBP35.22■■■■□ 3.23
NUP50-211ENST00000445721 ABCA3Q99758 1704 aa35.2■■■■□ 3.23
NUP50-211ENST00000445721 BTG4Q9NY30 223 aa35.19■■■■□ 3.22
NUP50-211ENST00000445721 LRP5O75197 1615 aa35.17■■■■□ 3.22
NUP50-211ENST00000445721 ANKARQ7Z5J8 1434 aa35.15■■■■□ 3.22
NUP50-211ENST00000445721 HRCP23327 699 aa35.14■■■■□ 3.22
NUP50-211ENST00000445721 HIRIP3Q9BW71 556 aaPredicted RBP35.12■■■■□ 3.21
NUP50-211ENST00000445721 EN1Q05925 392 aaPredicted RBP35.11■■■■□ 3.21
NUP50-211ENST00000445721 FAM182BQ5T319 152 aa35.11■■■■□ 3.21
NUP50-211ENST00000445721 GPRASP1Q5JY77 1395 aa35.11■■■■□ 3.21
NUP50-211ENST00000445721 NRAPQ86VF7 1730 aa35.09■■■■□ 3.21
NUP50-211ENST00000445721 DLC1Q96QB1 1528 aa35.08■■■■□ 3.21
NUP50-211ENST00000445721 TRAK1Q9UPV9 953 aa35.07■■■■□ 3.2
NUP50-211ENST00000445721 SPATA31A5Q5VU36 1347 aa35.06■■■■□ 3.2
NUP50-211ENST00000445721 SPATA31A7Q8IWB4 1347 aa35.06■■■■□ 3.2
NUP50-211ENST00000445721 MINK1Q8N4C8 1332 aaPredicted RBP35.06■■■■□ 3.2
NUP50-211ENST00000445721 ACIN1Q9UKV3 1341 aaKnown RBP35.06■■■■□ 3.2
NUP50-211ENST00000445721 TRPM3Q9HCF6 1732 aaPredicted RBP35.05■■■■□ 3.2
NUP50-211ENST00000445721 COL14A1Q05707 1796 aaKnown RBP35.04■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms