RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 KNDC1Q76NI1 1749 aa13.2□□□□□ -0.3
NPHP1-207ENST00000445609 QRICH2Q9H0J4 1663 aa13.2□□□□□ -0.3
NPHP1-207ENST00000445609 PUS7Q96PZ0 661 aaKnown RBP13.19□□□□□ -0.3
NPHP1-207ENST00000445609 DMRT2Q9Y5R5 561 aa13.18□□□□□ -0.3
NPHP1-207ENST00000445609 XRN1Q8IZH2 1706 aaKnown RBP13.18□□□□□ -0.3
NPHP1-207ENST00000445609 STRCQ7RTU9 1775 aa13.18□□□□□ -0.3
NPHP1-207ENST00000445609 SRPK2P78362 688 aaKnown RBP13.16□□□□□ -0.3
NPHP1-207ENST00000445609 CDK19Q9BWU1 502 aa13.16□□□□□ -0.3
NPHP1-207ENST00000445609 CHD2O14647 1828 aaKnown RBP13.16□□□□□ -0.3
NPHP1-207ENST00000445609 TULP4Q9NRJ4 1543 aa13.15□□□□□ -0.3
NPHP1-207ENST00000445609 WASLO00401 505 aaPredicted RBP13.15□□□□□ -0.3
NPHP1-207ENST00000445609 CABP2Q9NPB3 220 aa13.15□□□□□ -0.3
NPHP1-207ENST00000445609 AEBP2Q6ZN18 517 aaPredicted RBP13.15□□□□□ -0.3
NPHP1-207ENST00000445609 PROSER2Q86WR7 435 aaPredicted RBP13.14□□□□□ -0.31
NPHP1-207ENST00000445609 NWD1Q149M9 1564 aa13.13□□□□□ -0.31
NPHP1-207ENST00000445609 ATAD2Q6PL18 1390 aa13.12□□□□□ -0.31
NPHP1-207ENST00000445609 NKTRP30414 1462 aaKnown RBP13.12□□□□□ -0.31
NPHP1-207ENST00000445609 TMC1Q8TDI8 760 aa13.12□□□□□ -0.31
NPHP1-207ENST00000445609 RBM33Q96EV2 1170 aaKnown RBP13.12□□□□□ -0.31
NPHP1-207ENST00000445609 PANK3Q9H999 370 aa13.11□□□□□ -0.31
NPHP1-207ENST00000445609 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.11□□□□□ -0.31
NPHP1-207ENST00000445609 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
NPHP1-207ENST00000445609 ADGRB2O60241 1585 aa13.11□□□□□ -0.31
NPHP1-207ENST00000445609 C14orf37Q86TY3 774 aa13.1□□□□□ -0.31
NPHP1-207ENST00000445609 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
NPHP1-207ENST00000445609 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
NPHP1-207ENST00000445609 NUDT16Q96DE0 195 aaKnown RBP13.09□□□□□ -0.31
NPHP1-207ENST00000445609 ADGRL3Q9HAR2 1447 aa13.08□□□□□ -0.31
NPHP1-207ENST00000445609 CCDC61Q9Y6R9 512 aa13.08□□□□□ -0.32
NPHP1-207ENST00000445609 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
NPHP1-207ENST00000445609 PER1O15534 1290 aaPredicted RBP13.08□□□□□ -0.32
NPHP1-207ENST00000445609 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
NPHP1-207ENST00000445609 TMEM94Q12767 1356 aa13.08□□□□□ -0.32
NPHP1-207ENST00000445609 C19orf44Q9H6X5 657 aa13.07□□□□□ -0.32
NPHP1-207ENST00000445609 NUTM2FA1L443 756 aa13.06□□□□□ -0.32
NPHP1-207ENST00000445609 ANP32CO43423 234 aa13.06□□□□□ -0.32
NPHP1-207ENST00000445609 PRR36Q9H6K5 1346 aa13.06□□□□□ -0.32
NPHP1-207ENST00000445609 TERF2IPQ9NYB0 399 aa13.06□□□□□ -0.32
NPHP1-207ENST00000445609 KNSTRNQ9Y448 316 aa13.06□□□□□ -0.32
NPHP1-207ENST00000445609 STRCP1A6NGW2 1772 aa13.05□□□□□ -0.32
NPHP1-207ENST00000445609 MYOM1P52179 1685 aa13.05□□□□□ -0.32
NPHP1-207ENST00000445609 MIER1Q8N108 512 aa13.05□□□□□ -0.32
NPHP1-207ENST00000445609 ANKRD36BQ8N2N9 1353 aa13.05□□□□□ -0.32
NPHP1-207ENST00000445609 ATP7BP35670 1465 aa13.05□□□□□ -0.32
NPHP1-207ENST00000445609 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
NPHP1-207ENST00000445609 CARD14Q9BXL6 1004 aa13.04□□□□□ -0.32
NPHP1-207ENST00000445609 CDC42BPGQ6DT37 1551 aa13.04□□□□□ -0.32
NPHP1-207ENST00000445609 ANKARQ7Z5J8 1434 aa13.04□□□□□ -0.32
NPHP1-207ENST00000445609 HDGFL2Q7Z4V5 671 aaPredicted RBP13.04□□□□□ -0.32
NPHP1-207ENST00000445609 NALCNQ8IZF0 1738 aa13.03□□□□□ -0.32
NPHP1-207ENST00000445609 LRRC7Q96NW7 1537 aa13.03□□□□□ -0.32
NPHP1-207ENST00000445609 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
NPHP1-207ENST00000445609 ATF3P18847 181 aa13.02□□□□□ -0.32
NPHP1-207ENST00000445609 A0A1W2PP64 1363 aa13.02□□□□□ -0.33
NPHP1-207ENST00000445609 MSH6P52701 1360 aa13.02□□□□□ -0.33
NPHP1-207ENST00000445609 PRKRIP1Q9H875 184 aaPredicted RBP13.01□□□□□ -0.33
NPHP1-207ENST00000445609 CD163L1Q9NR16 1453 aa13.01□□□□□ -0.33
NPHP1-207ENST00000445609 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
NPHP1-207ENST00000445609 CADPS2Q86UW7 1296 aa13.01□□□□□ -0.33
NPHP1-207ENST00000445609 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
NPHP1-207ENST00000445609 DCCP43146 1447 aa13.01□□□□□ -0.33
NPHP1-207ENST00000445609 NSD3Q9BZ95 1437 aa13□□□□□ -0.33
NPHP1-207ENST00000445609 CNGB1Q14028 1251 aaPredicted RBP13□□□□□ -0.33
NPHP1-207ENST00000445609 CPSF1Q10570 1443 aaKnown RBP13□□□□□ -0.33
NPHP1-207ENST00000445609 FMN2Q9NZ56 1722 aa13□□□□□ -0.33
NPHP1-207ENST00000445609 ACEP12821 1306 aa12.99□□□□□ -0.33
NPHP1-207ENST00000445609 PMFBP1Q8TBY8 1022 aa12.99□□□□□ -0.33
NPHP1-207ENST00000445609 USP32Q8NFA0 1604 aa12.99□□□□□ -0.33
NPHP1-207ENST00000445609 KTN1Q86UP2 1357 aaKnown RBP12.99□□□□□ -0.33
NPHP1-207ENST00000445609 NPC1L1Q9UHC9 1359 aa12.99□□□□□ -0.33
NPHP1-207ENST00000445609 CC2D1BQ5T0F9 858 aaKnown RBP12.99□□□□□ -0.33
NPHP1-207ENST00000445609 CGNL1Q0VF96 1302 aa12.98□□□□□ -0.33
NPHP1-207ENST00000445609 ESCO1Q5FWF5 840 aa12.98□□□□□ -0.33
NPHP1-207ENST00000445609 NGDNQ8NEJ9 315 aaKnown RBP12.98□□□□□ -0.33
NPHP1-207ENST00000445609 RALBP1Q15311 655 aa12.98□□□□□ -0.33
NPHP1-207ENST00000445609 PHF8Q9UPP1 1060 aa12.98□□□□□ -0.33
NPHP1-207ENST00000445609 POLR3AO14802 1390 aaPredicted RBP12.97□□□□□ -0.33
NPHP1-207ENST00000445609 TOPAZ1Q8N9V7 1692 aa12.97□□□□□ -0.33
NPHP1-207ENST00000445609 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.33
NPHP1-207ENST00000445609 ORAI2Q96SN7 254 aa12.96□□□□□ -0.33
NPHP1-207ENST00000445609 MST1RQ04912 1400 aa12.95□□□□□ -0.34
NPHP1-207ENST00000445609 EDC4Q6P2E9 1401 aaKnown RBP12.95□□□□□ -0.34
NPHP1-207ENST00000445609 LTBP4Q8N2S1 1624 aa12.95□□□□□ -0.34
NPHP1-207ENST00000445609 ITSN1Q15811 1721 aa12.95□□□□□ -0.34
NPHP1-207ENST00000445609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.95□□□□□ -0.34
NPHP1-207ENST00000445609 PARD3Q8TEW0 1356 aa12.95□□□□□ -0.34
NPHP1-207ENST00000445609 CCER2I3L3R5 266 aa12.94□□□□□ -0.34
NPHP1-207ENST00000445609 FYB1O15117 783 aa12.94□□□□□ -0.34
NPHP1-207ENST00000445609 NSD2O96028 1365 aa12.94□□□□□ -0.34
NPHP1-207ENST00000445609 XIRP1Q702N8 1843 aaKnown RBP12.94□□□□□ -0.34
NPHP1-207ENST00000445609 USP6P35125 1406 aa12.94□□□□□ -0.34
NPHP1-207ENST00000445609 SLAIN2Q9P270 581 aa12.94□□□□□ -0.34
NPHP1-207ENST00000445609 TTC21BQ7Z4L5 1316 aa12.92□□□□□ -0.34
NPHP1-207ENST00000445609 RGPD8O14715 1765 aaPredicted RBP12.92□□□□□ -0.34
NPHP1-207ENST00000445609 PSME1Q06323 249 aa12.92□□□□□ -0.34
NPHP1-207ENST00000445609 MORC1Q86VD1 984 aa12.92□□□□□ -0.34
NPHP1-207ENST00000445609 MYBBP1AQ9BQG0 1328 aaKnown RBP12.92□□□□□ -0.34
NPHP1-207ENST00000445609 FOXO3O43524 673 aa12.92□□□□□ -0.34
NPHP1-207ENST00000445609 GGNBP2Q9H3C7 697 aa12.92□□□□□ -0.34
NPHP1-207ENST00000445609 SSH2Q76I76 1423 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms