RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 ESCO1Q5FWF5 840 aa22.96■■□□□ 1.27
SEC13-213ENST00000445064 QTRT2Q9H974 415 aaKnown RBP22.95■■□□□ 1.26
SEC13-213ENST00000445064 NUTM2FA1L443 756 aa22.94■■□□□ 1.26
SEC13-213ENST00000445064 UPF1Q92900 1129 aaKnown RBP eCLIP22.94■■□□□ 1.26
SEC13-213ENST00000445064 NGLY1Q96IV0 654 aa22.94■■□□□ 1.26
SEC13-213ENST00000445064 LAMC1P11047 1609 aa22.93■■□□□ 1.26
SEC13-213ENST00000445064 LRPPRCP42704 1394 aaKnown RBP22.92■■□□□ 1.26
SEC13-213ENST00000445064 IFT172Q9UG01 1749 aa22.92■■□□□ 1.26
SEC13-213ENST00000445064 ABCC11Q96J66 1382 aa22.9■■□□□ 1.26
SEC13-213ENST00000445064 FOXO3O43524 673 aa22.9■■□□□ 1.26
SEC13-213ENST00000445064 PLEKHH1Q9ULM0 1364 aa22.89■■□□□ 1.26
SEC13-213ENST00000445064 ACIN1Q9UKV3 1341 aaKnown RBP22.89■■□□□ 1.26
SEC13-213ENST00000445064 RBM6P78332 1123 aaKnown RBP22.89■■□□□ 1.25
SEC13-213ENST00000445064 XPCQ01831 940 aaPredicted RBP22.89■■□□□ 1.25
SEC13-213ENST00000445064 TECPR2O15040 1411 aa22.89■■□□□ 1.25
SEC13-213ENST00000445064 PIK3C2GO75747 1445 aa22.89■■□□□ 1.25
SEC13-213ENST00000445064 CDC42BPGQ6DT37 1551 aa22.89■■□□□ 1.25
SEC13-213ENST00000445064 NPHP3Q7Z494 1330 aa22.88■■□□□ 1.25
SEC13-213ENST00000445064 CDK12Q9NYV4 1490 aaPredicted RBP22.87■■□□□ 1.25
SEC13-213ENST00000445064 C14orf93Q9H972 538 aaKnown RBP22.86■■□□□ 1.25
SEC13-213ENST00000445064 YTHDC2Q9H6S0 1430 aaKnown RBP22.85■■□□□ 1.25
SEC13-213ENST00000445064 CFAP70Q5T0N1 1121 aa22.85■■□□□ 1.25
SEC13-213ENST00000445064 USP21Q9UK80 565 aa22.85■■□□□ 1.25
SEC13-213ENST00000445064 RAB3GAP2Q9H2M9 1393 aa22.83■■□□□ 1.25
SEC13-213ENST00000445064 PXDNQ92626 1479 aa22.82■■□□□ 1.24
SEC13-213ENST00000445064 FNBP4Q8N3X1 1017 aaPredicted RBP22.82■■□□□ 1.24
SEC13-213ENST00000445064 SIRT1Q96EB6 747 aa22.82■■□□□ 1.24
SEC13-213ENST00000445064 KNDC1Q76NI1 1749 aa22.82■■□□□ 1.24
SEC13-213ENST00000445064 RGS12O14924 1447 aa22.82■■□□□ 1.24
SEC13-213ENST00000445064 DHX57Q6P158 1386 aaKnown RBP22.8■■□□□ 1.24
SEC13-213ENST00000445064 COL22A1Q8NFW1 1626 aaPredicted RBP22.8■■□□□ 1.24
SEC13-213ENST00000445064 TRPC5Q9UL62 973 aaPredicted RBP22.79■■□□□ 1.24
SEC13-213ENST00000445064 SAFB2Q14151 953 aaKnown RBP eCLIP22.78■■□□□ 1.24
SEC13-213ENST00000445064 MYOM2P54296 1465 aa22.78■■□□□ 1.24
SEC13-213ENST00000445064 NRXN1Q9ULB1 1477 aa22.78■■□□□ 1.24
SEC13-213ENST00000445064 KRT28Q7Z3Y7 464 aa22.77■■□□□ 1.24
SEC13-213ENST00000445064 FMN2Q9NZ56 1722 aa22.77■■□□□ 1.23
SEC13-213ENST00000445064 PRAM1Q96QH2 718 aa22.76■■□□□ 1.23
SEC13-213ENST00000445064 KDM2AQ9Y2K7 1162 aa22.74■■□□□ 1.23
SEC13-213ENST00000445064 SPATA31A3Q5VYP0 1347 aa22.74■■□□□ 1.23
SEC13-213ENST00000445064 POGKQ9P215 609 aa22.73■■□□□ 1.23
SEC13-213ENST00000445064 PHF8Q9UPP1 1060 aa22.73■■□□□ 1.23
SEC13-213ENST00000445064 ATRNO75882 1429 aa22.72■■□□□ 1.23
SEC13-213ENST00000445064 RGPD8O14715 1765 aaPredicted RBP22.71■■□□□ 1.23
SEC13-213ENST00000445064 DCAF11Q8TEB1 546 aa22.71■■□□□ 1.23
SEC13-213ENST00000445064 BCL9LQ86UU0 1499 aa22.71■■□□□ 1.23
SEC13-213ENST00000445064 TRAK1Q9UPV9 953 aa22.7■■□□□ 1.22
SEC13-213ENST00000445064 KIF1AQ12756 1690 aa22.69■■□□□ 1.22
SEC13-213ENST00000445064 PLEKHG5O94827 1062 aa22.69■■□□□ 1.22
SEC13-213ENST00000445064 PSME1Q06323 249 aa22.69■■□□□ 1.22
SEC13-213ENST00000445064 MARF1Q9Y4F3 1742 aaKnown RBP22.68■■□□□ 1.22
SEC13-213ENST00000445064 PMFBP1Q8TBY8 1022 aa22.67■■□□□ 1.22
SEC13-213ENST00000445064 GJD4Q96KN9 370 aaPredicted RBP22.67■■□□□ 1.22
SEC13-213ENST00000445064 CABLES1Q8TDN4 633 aa22.66■■□□□ 1.22
SEC13-213ENST00000445064 HIRIP3Q9BW71 556 aaPredicted RBP22.66■■□□□ 1.22
SEC13-213ENST00000445064 ATAD2Q6PL18 1390 aa22.65■■□□□ 1.22
SEC13-213ENST00000445064 HAP1P54257 671 aaPredicted RBP22.65■■□□□ 1.22
SEC13-213ENST00000445064 LMOD2Q6P5Q4 547 aa22.65■■□□□ 1.22
SEC13-213ENST00000445064 DLC1Q96QB1 1528 aa22.64■■□□□ 1.21
SEC13-213ENST00000445064 HRCP23327 699 aa22.64■■□□□ 1.21
SEC13-213ENST00000445064 UNC5CLQ8IV45 518 aa22.64■■□□□ 1.21
SEC13-213ENST00000445064 ADGRB1O14514 1584 aa22.63■■□□□ 1.21
SEC13-213ENST00000445064 TNS3Q68CZ2 1445 aa22.63■■□□□ 1.21
SEC13-213ENST00000445064 MINK1Q8N4C8 1332 aaPredicted RBP22.62■■□□□ 1.21
SEC13-213ENST00000445064 SLIT2O94813 1529 aa22.6■■□□□ 1.21
SEC13-213ENST00000445064 SBNO1A3KN83 1393 aa22.6■■□□□ 1.21
SEC13-213ENST00000445064 USP32Q8NFA0 1604 aa22.6■■□□□ 1.21
SEC13-213ENST00000445064 STAC3Q96MF2 364 aa22.59■■□□□ 1.21
SEC13-213ENST00000445064 ANKARQ7Z5J8 1434 aa22.58■■□□□ 1.21
SEC13-213ENST00000445064 WASLO00401 505 aaPredicted RBP22.57■■□□□ 1.2
SEC13-213ENST00000445064 PRR36Q9H6K5 1346 aa22.57■■□□□ 1.2
SEC13-213ENST00000445064 RALGAPBQ86X10 1494 aa22.56■■□□□ 1.2
SEC13-213ENST00000445064 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.56■■□□□ 1.2
SEC13-213ENST00000445064 ADGRB2O60241 1585 aa22.55■■□□□ 1.2
SEC13-213ENST00000445064 ARHGEF10O15013 1369 aa22.55■■□□□ 1.2
SEC13-213ENST00000445064 FAM83GA6ND36 823 aa22.54■■□□□ 1.2
SEC13-213ENST00000445064 GLI3P10071 1580 aa22.54■■□□□ 1.2
SEC13-213ENST00000445064 GPRASP1Q5JY77 1395 aa22.52■■□□□ 1.2
SEC13-213ENST00000445064 VPS72Q15906 364 aa22.52■■□□□ 1.2
SEC13-213ENST00000445064 CCDC9Q9Y3X0 531 aaKnown RBP22.52■■□□□ 1.2
SEC13-213ENST00000445064 CCDC125Q86Z20 511 aa22.51■■□□□ 1.19
SEC13-213ENST00000445064 NGDNQ8NEJ9 315 aaKnown RBP22.51■■□□□ 1.19
SEC13-213ENST00000445064 EIF3AQ14152 1382 aaKnown RBP22.5■■□□□ 1.19
SEC13-213ENST00000445064 SEPT12Q8IYM1 358 aa22.5■■□□□ 1.19
SEC13-213ENST00000445064 TULP4Q9NRJ4 1543 aa22.5■■□□□ 1.19
SEC13-213ENST00000445064 PAK3O75914 559 aaPredicted RBP22.49■■□□□ 1.19
SEC13-213ENST00000445064 ABCA3Q99758 1704 aa22.48■■□□□ 1.19
SEC13-213ENST00000445064 PLCH1Q4KWH8 1693 aa22.48■■□□□ 1.19
SEC13-213ENST00000445064 TRPM3Q9HCF6 1732 aaPredicted RBP22.48■■□□□ 1.19
SEC13-213ENST00000445064 NUDT16Q96DE0 195 aaKnown RBP22.47■■□□□ 1.19
SEC13-213ENST00000445064 ONECUT3O60422 494 aaPredicted RBP22.46■■□□□ 1.19
SEC13-213ENST00000445064 BTG4Q9NY30 223 aa22.46■■□□□ 1.19
SEC13-213ENST00000445064 NWD2Q9ULI1 1742 aa22.45■■□□□ 1.19
SEC13-213ENST00000445064 CDK19Q9BWU1 502 aa22.45■■□□□ 1.18
SEC13-213ENST00000445064 ZRANB1Q9UGI0 708 aa22.45■■□□□ 1.18
SEC13-213ENST00000445064 ARHGEF28Q8N1W1 1705 aaKnown RBP22.45■■□□□ 1.18
SEC13-213ENST00000445064 BRWD3Q6RI45 1802 aa22.45■■□□□ 1.18
SEC13-213ENST00000445064 ALS2Q96Q42 1657 aa22.44■■□□□ 1.18
SEC13-213ENST00000445064 NBPF1Q3BBV0 1214 aa22.43■■□□□ 1.18
SEC13-213ENST00000445064 A0A0G2JS52 829 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms