RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 C8orf37Q96NL8 207 aa29.61■■■□□ 2.33
EDEM1-203ENST00000443790 PIK3C2GO75747 1445 aa29.6■■■□□ 2.33
EDEM1-203ENST00000443790 LRPPRCP42704 1394 aaKnown RBP29.59■■■□□ 2.33
EDEM1-203ENST00000443790 KNDC1Q76NI1 1749 aa29.59■■■□□ 2.33
EDEM1-203ENST00000443790 STK26Q9P289 416 aa29.56■■■□□ 2.32
EDEM1-203ENST00000443790 ABCC11Q96J66 1382 aa29.55■■■□□ 2.32
EDEM1-203ENST00000443790 ACIN1Q9UKV3 1341 aaKnown RBP29.55■■■□□ 2.32
EDEM1-203ENST00000443790 UPF1Q92900 1129 aaKnown RBP eCLIP29.55■■■□□ 2.32
EDEM1-203ENST00000443790 COL22A1Q8NFW1 1626 aaPredicted RBP29.54■■■□□ 2.32
EDEM1-203ENST00000443790 ADAMTS2O95450 1211 aa29.54■■■□□ 2.32
EDEM1-203ENST00000443790 ESCO1Q5FWF5 840 aa29.53■■■□□ 2.32
EDEM1-203ENST00000443790 WAPLQ7Z5K2 1190 aa29.53■■■□□ 2.32
EDEM1-203ENST00000443790 NPHP3Q7Z494 1330 aa29.52■■■□□ 2.32
EDEM1-203ENST00000443790 TMEM132EQ6IEE7 984 aa29.52■■■□□ 2.32
EDEM1-203ENST00000443790 PXDNQ92626 1479 aa29.51■■■□□ 2.31
EDEM1-203ENST00000443790 NGLY1Q96IV0 654 aa29.51■■■□□ 2.31
EDEM1-203ENST00000443790 QTRT2Q9H974 415 aaKnown RBP29.51■■■□□ 2.31
EDEM1-203ENST00000443790 RGS12O14924 1447 aa29.51■■■□□ 2.31
EDEM1-203ENST00000443790 PLEKHH1Q9ULM0 1364 aa29.51■■■□□ 2.31
EDEM1-203ENST00000443790 RBM6P78332 1123 aaKnown RBP29.5■■■□□ 2.31
EDEM1-203ENST00000443790 YTHDC2Q9H6S0 1430 aaKnown RBP29.5■■■□□ 2.31
EDEM1-203ENST00000443790 MYOM2P54296 1465 aa29.48■■■□□ 2.31
EDEM1-203ENST00000443790 NRXN1Q9ULB1 1477 aa29.48■■■□□ 2.31
EDEM1-203ENST00000443790 FMN2Q9NZ56 1722 aa29.47■■■□□ 2.31
EDEM1-203ENST00000443790 FOXO3O43524 673 aa29.45■■■□□ 2.31
EDEM1-203ENST00000443790 NUTM2FA1L443 756 aa29.44■■■□□ 2.3
EDEM1-203ENST00000443790 RAB3GAP2Q9H2M9 1393 aa29.43■■■□□ 2.3
EDEM1-203ENST00000443790 C14orf93Q9H972 538 aaKnown RBP29.43■■■□□ 2.3
EDEM1-203ENST00000443790 XPCQ01831 940 aaPredicted RBP29.42■■■□□ 2.3
EDEM1-203ENST00000443790 USP21Q9UK80 565 aa29.42■■■□□ 2.3
EDEM1-203ENST00000443790 FNBP4Q8N3X1 1017 aaPredicted RBP29.41■■■□□ 2.3
EDEM1-203ENST00000443790 KIF1AQ12756 1690 aa29.4■■■□□ 2.3
EDEM1-203ENST00000443790 SIRT1Q96EB6 747 aa29.4■■■□□ 2.3
EDEM1-203ENST00000443790 CFAP70Q5T0N1 1121 aa29.38■■■□□ 2.29
EDEM1-203ENST00000443790 TRPC5Q9UL62 973 aaPredicted RBP29.38■■■□□ 2.29
EDEM1-203ENST00000443790 DHX57Q6P158 1386 aaKnown RBP29.38■■■□□ 2.29
EDEM1-203ENST00000443790 MARF1Q9Y4F3 1742 aaKnown RBP29.37■■■□□ 2.29
EDEM1-203ENST00000443790 ATRNO75882 1429 aa29.37■■■□□ 2.29
EDEM1-203ENST00000443790 DLC1Q96QB1 1528 aa29.31■■■□□ 2.28
EDEM1-203ENST00000443790 BCL9LQ86UU0 1499 aa29.31■■■□□ 2.28
EDEM1-203ENST00000443790 SPATA31A3Q5VYP0 1347 aa29.31■■■□□ 2.28
EDEM1-203ENST00000443790 RGPD8O14715 1765 aaPredicted RBP29.29■■■□□ 2.28
EDEM1-203ENST00000443790 PRAM1Q96QH2 718 aa29.29■■■□□ 2.28
EDEM1-203ENST00000443790 ADGRB1O14514 1584 aa29.28■■■□□ 2.28
EDEM1-203ENST00000443790 ATAD2Q6PL18 1390 aa29.27■■■□□ 2.28
EDEM1-203ENST00000443790 KRT28Q7Z3Y7 464 aa29.27■■■□□ 2.28
EDEM1-203ENST00000443790 SAFB2Q14151 953 aaKnown RBP eCLIP29.26■■■□□ 2.27
EDEM1-203ENST00000443790 PHF8Q9UPP1 1060 aa29.26■■■□□ 2.27
EDEM1-203ENST00000443790 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.25■■■□□ 2.27
EDEM1-203ENST00000443790 TNS3Q68CZ2 1445 aa29.25■■■□□ 2.27
EDEM1-203ENST00000443790 ADGRB2O60241 1585 aa29.25■■■□□ 2.27
EDEM1-203ENST00000443790 USP32Q8NFA0 1604 aa29.24■■■□□ 2.27
EDEM1-203ENST00000443790 ANKARQ7Z5J8 1434 aa29.22■■■□□ 2.27
EDEM1-203ENST00000443790 SLIT2O94813 1529 aa29.22■■■□□ 2.27
EDEM1-203ENST00000443790 POGKQ9P215 609 aa29.22■■■□□ 2.27
EDEM1-203ENST00000443790 PSME1Q06323 249 aa29.2■■■□□ 2.26
EDEM1-203ENST00000443790 SBNO1A3KN83 1393 aa29.19■■■□□ 2.26
EDEM1-203ENST00000443790 GJD4Q96KN9 370 aaPredicted RBP29.19■■■□□ 2.26
EDEM1-203ENST00000443790 UNC5CLQ8IV45 518 aa29.17■■■□□ 2.26
EDEM1-203ENST00000443790 EP400Q96L91 3159 aa29.16■■■□□ 2.26
EDEM1-203ENST00000443790 DCAF11Q8TEB1 546 aa29.16■■■□□ 2.26
EDEM1-203ENST00000443790 TRAK1Q9UPV9 953 aa29.16■■■□□ 2.26
EDEM1-203ENST00000443790 KDM2AQ9Y2K7 1162 aa29.16■■■□□ 2.26
EDEM1-203ENST00000443790 ABCA3Q99758 1704 aa29.16■■■□□ 2.26
EDEM1-203ENST00000443790 GLI3P10071 1580 aa29.15■■■□□ 2.26
EDEM1-203ENST00000443790 ARHGEF10O15013 1369 aa29.14■■■□□ 2.26
EDEM1-203ENST00000443790 HRCP23327 699 aa29.14■■■□□ 2.26
EDEM1-203ENST00000443790 HAP1P54257 671 aaPredicted RBP29.14■■■□□ 2.26
EDEM1-203ENST00000443790 RALGAPBQ86X10 1494 aa29.14■■■□□ 2.26
EDEM1-203ENST00000443790 STAC3Q96MF2 364 aa29.13■■■□□ 2.25
EDEM1-203ENST00000443790 PMFBP1Q8TBY8 1022 aa29.12■■■□□ 2.25
EDEM1-203ENST00000443790 CABLES1Q8TDN4 633 aa29.12■■■□□ 2.25
EDEM1-203ENST00000443790 HIRIP3Q9BW71 556 aaPredicted RBP29.12■■■□□ 2.25
EDEM1-203ENST00000443790 EIF3AQ14152 1382 aaKnown RBP29.12■■■□□ 2.25
EDEM1-203ENST00000443790 TULP4Q9NRJ4 1543 aa29.11■■■□□ 2.25
EDEM1-203ENST00000443790 MINK1Q8N4C8 1332 aaPredicted RBP29.11■■■□□ 2.25
EDEM1-203ENST00000443790 PLCH1Q4KWH8 1693 aa29.11■■■□□ 2.25
EDEM1-203ENST00000443790 LMOD2Q6P5Q4 547 aa29.1■■■□□ 2.25
EDEM1-203ENST00000443790 TRPM3Q9HCF6 1732 aaPredicted RBP29.1■■■□□ 2.25
EDEM1-203ENST00000443790 NWD2Q9ULI1 1742 aa29.08■■■□□ 2.25
EDEM1-203ENST00000443790 PRR36Q9H6K5 1346 aa29.08■■■□□ 2.25
EDEM1-203ENST00000443790 PLEKHG5O94827 1062 aa29.07■■■□□ 2.24
EDEM1-203ENST00000443790 ARHGEF28Q8N1W1 1705 aaKnown RBP29.06■■■□□ 2.24
EDEM1-203ENST00000443790 WASLO00401 505 aaPredicted RBP29.05■■■□□ 2.24
EDEM1-203ENST00000443790 ALS2Q96Q42 1657 aa29.05■■■□□ 2.24
EDEM1-203ENST00000443790 GPRASP1Q5JY77 1395 aa29.03■■■□□ 2.24
EDEM1-203ENST00000443790 VPS72Q15906 364 aa29.03■■■□□ 2.24
EDEM1-203ENST00000443790 CCDC125Q86Z20 511 aa29.02■■■□□ 2.24
EDEM1-203ENST00000443790 BRWD3Q6RI45 1802 aa29■■■□□ 2.23
EDEM1-203ENST00000443790 ATP7BP35670 1465 aa28.98■■■□□ 2.23
EDEM1-203ENST00000443790 FAM83GA6ND36 823 aa28.98■■■□□ 2.23
EDEM1-203ENST00000443790 ITSN1Q15811 1721 aa28.97■■■□□ 2.23
EDEM1-203ENST00000443790 NRAPQ86VF7 1730 aa28.97■■■□□ 2.23
EDEM1-203ENST00000443790 SEPT12Q8IYM1 358 aa28.96■■■□□ 2.23
EDEM1-203ENST00000443790 CCDC9Q9Y3X0 531 aaKnown RBP28.96■■■□□ 2.23
EDEM1-203ENST00000443790 BLMP54132 1417 aaPredicted RBP28.95■■■□□ 2.23
EDEM1-203ENST00000443790 CRYBG1Q9Y4K1 1723 aa28.95■■■□□ 2.23
EDEM1-203ENST00000443790 NGDNQ8NEJ9 315 aaKnown RBP28.95■■■□□ 2.22
EDEM1-203ENST00000443790 KIAA1210Q9ULL0 1709 aa28.94■■■□□ 2.22
EDEM1-203ENST00000443790 COL14A1Q05707 1796 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms