RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 APAF1O14727 1248 aa18.87■□□□□ 0.61
CDH23-207ENST00000442677 TRAK1Q9UPV9 953 aa18.86■□□□□ 0.61
CDH23-207ENST00000442677 PRPF40AO75400 957 aaKnown RBP18.86■□□□□ 0.61
CDH23-207ENST00000442677 DZIP1LQ8IYY4 767 aaKnown RBP18.86■□□□□ 0.61
CDH23-207ENST00000442677 CENPHQ9H3R5 247 aa18.85■□□□□ 0.61
CDH23-207ENST00000442677 ANKRD62A6NC57 917 aa18.85■□□□□ 0.61
CDH23-207ENST00000442677 C1orf141Q5JVX7 400 aa18.85■□□□□ 0.61
CDH23-207ENST00000442677 FAM193AP78312 1265 aa18.84■□□□□ 0.61
CDH23-207ENST00000442677 FAM177A1Q8N128 213 aaPredicted RBP18.84■□□□□ 0.61
CDH23-207ENST00000442677 PRKCSHP14314 528 aaPredicted RBP18.84■□□□□ 0.61
CDH23-207ENST00000442677 MTMR7Q9Y216 660 aa18.84■□□□□ 0.61
CDH23-207ENST00000442677 VPS37DQ86XT2 251 aa18.84■□□□□ 0.61
CDH23-207ENST00000442677 FYB1O15117 783 aa18.83■□□□□ 0.61
CDH23-207ENST00000442677 NEXNQ0ZGT2 675 aa18.83■□□□□ 0.6
CDH23-207ENST00000442677 ENOX2Q16206 610 aaKnown RBP18.83■□□□□ 0.6
CDH23-207ENST00000442677 LETM1O95202 739 aaPredicted RBP18.82■□□□□ 0.6
CDH23-207ENST00000442677 CEBPZQ03701 1054 aaKnown RBP18.82■□□□□ 0.6
CDH23-207ENST00000442677 ST20-MTHFSA0A0A6YYL1 179 aa18.82■□□□□ 0.6
CDH23-207ENST00000442677 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.82■□□□□ 0.6
CDH23-207ENST00000442677 SMARCE1Q969G3 411 aa18.82■□□□□ 0.6
CDH23-207ENST00000442677 G3BP1Q13283 466 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDH23-207ENST00000442677 GOLGA6L10A6NI86 522 aa18.81■□□□□ 0.6
CDH23-207ENST00000442677 HMGN5P82970 282 aaKnown RBP18.81■□□□□ 0.6
CDH23-207ENST00000442677 PRDM10Q9NQV6 1147 aa18.81■□□□□ 0.6
CDH23-207ENST00000442677 PRKRIP1Q9H875 184 aaPredicted RBP18.8■□□□□ 0.6
CDH23-207ENST00000442677 PANK1Q8TE04 598 aa18.79■□□□□ 0.6
CDH23-207ENST00000442677 SEPT7Q16181 437 aaKnown RBP18.79■□□□□ 0.6
CDH23-207ENST00000442677 CCP110O43303 1012 aa18.79■□□□□ 0.6
CDH23-207ENST00000442677 KINO60870 393 aaKnown RBP18.78■□□□□ 0.6
CDH23-207ENST00000442677 TEFQ10587 303 aa18.78■□□□□ 0.6
CDH23-207ENST00000442677 RALYLQ86SE5 291 aaKnown RBP18.78■□□□□ 0.6
CDH23-207ENST00000442677 FILIP1LQ4L180 1135 aa18.78■□□□□ 0.6
CDH23-207ENST00000442677 TAX1BP1Q86VP1 789 aa18.78■□□□□ 0.6
CDH23-207ENST00000442677 ATP2B1P20020 1258 aa18.78■□□□□ 0.6
CDH23-207ENST00000442677 IBSPP21815 317 aaPredicted RBP18.78■□□□□ 0.6
CDH23-207ENST00000442677 MAGEC2Q9UBF1 373 aaPredicted RBP18.78■□□□□ 0.6
CDH23-207ENST00000442677 ZRSR2Q15696 482 aaKnown RBP18.77■□□□□ 0.6
CDH23-207ENST00000442677 FIBPO43427 364 aa18.77■□□□□ 0.6
CDH23-207ENST00000442677 FKBP5Q13451 457 aaPredicted RBP18.77■□□□□ 0.6
CDH23-207ENST00000442677 WASHC4Q2M389 1173 aa18.77■□□□□ 0.59
CDH23-207ENST00000442677 DYDC1Q8WWB3 177 aa18.77■□□□□ 0.59
CDH23-207ENST00000442677 DEF6Q9H4E7 631 aa18.77■□□□□ 0.59
CDH23-207ENST00000442677 RIPK4P57078 832 aa18.76■□□□□ 0.59
CDH23-207ENST00000442677 BRMS1Q9HCU9 246 aa18.76■□□□□ 0.59
CDH23-207ENST00000442677 TAF3Q5VWG9 929 aa18.76■□□□□ 0.59
CDH23-207ENST00000442677 CCDC112Q8NEF3 446 aa18.76■□□□□ 0.59
CDH23-207ENST00000442677 ERLIN2O94905 339 aa18.76■□□□□ 0.59
CDH23-207ENST00000442677 AEBP1Q8IUX7 1158 aa18.76■□□□□ 0.59
CDH23-207ENST00000442677 FMN1Q68DA7 1419 aa18.76■□□□□ 0.59
CDH23-207ENST00000442677 SOGA1O94964 1423 aa18.76■□□□□ 0.59
CDH23-207ENST00000442677 GOLGA6L7A0A1B0GV03 622 aa18.76■□□□□ 0.59
CDH23-207ENST00000442677 CDC45O75419 566 aa18.76■□□□□ 0.59
CDH23-207ENST00000442677 ROCK1Q13464 1354 aa18.75■□□□□ 0.59
CDH23-207ENST00000442677 SERPINC1P01008 464 aa18.75■□□□□ 0.59
CDH23-207ENST00000442677 CUX2O14529 1486 aa18.75■□□□□ 0.59
CDH23-207ENST00000442677 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
CDH23-207ENST00000442677 NEUROD6Q96NK8 337 aa18.74■□□□□ 0.59
CDH23-207ENST00000442677 ERC2O15083 957 aa18.74■□□□□ 0.59
CDH23-207ENST00000442677 MSH5O43196 834 aa18.74■□□□□ 0.59
CDH23-207ENST00000442677 COG3Q96JB2 828 aa18.74■□□□□ 0.59
CDH23-207ENST00000442677 CCDC181Q5TID7 509 aa18.74■□□□□ 0.59
CDH23-207ENST00000442677 TTC5Q8N0Z6 440 aa18.74■□□□□ 0.59
CDH23-207ENST00000442677 ANKRD30AQ9BXX3 1397 aa18.74■□□□□ 0.59
CDH23-207ENST00000442677 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
CDH23-207ENST00000442677 MBD3O95983 291 aa18.73■□□□□ 0.59
CDH23-207ENST00000442677 API5Q9BZZ5 524 aaKnown RBP18.73■□□□□ 0.59
CDH23-207ENST00000442677 STK11IPQ8N1F8 1099 aa18.73■□□□□ 0.59
CDH23-207ENST00000442677 GRPEL1Q9HAV7 217 aa18.73■□□□□ 0.59
CDH23-207ENST00000442677 RRP9O43818 475 aaKnown RBP18.72■□□□□ 0.59
CDH23-207ENST00000442677 KIF3BO15066 747 aa18.72■□□□□ 0.59
CDH23-207ENST00000442677 EIF3JO75822 258 aaKnown RBP18.72■□□□□ 0.59
CDH23-207ENST00000442677 MEX3CQ5U5Q3 659 aaKnown RBP18.71■□□□□ 0.59
CDH23-207ENST00000442677 CCDC102AQ96A19 550 aa18.71■□□□□ 0.59
CDH23-207ENST00000442677 NEK4P51957 841 aa18.71■□□□□ 0.59
CDH23-207ENST00000442677 HNRNPMP52272 730 aaKnown RBP eCLIP18.71■□□□□ 0.59
CDH23-207ENST00000442677 SYCP1Q15431 976 aa18.71■□□□□ 0.59
CDH23-207ENST00000442677 PSMA5P28066 241 aa18.71■□□□□ 0.59
CDH23-207ENST00000442677 NINLQ9Y2I6 1382 aa18.71■□□□□ 0.59
CDH23-207ENST00000442677 XBP1P17861 261 aa18.7■□□□□ 0.58
CDH23-207ENST00000442677 CBX1P83916 185 aa18.7■□□□□ 0.58
CDH23-207ENST00000442677 CLASRPQ8N2M8 674 aaKnown RBP18.7■□□□□ 0.58
CDH23-207ENST00000442677 GIMAP7Q8NHV1 300 aa18.7■□□□□ 0.58
CDH23-207ENST00000442677 USP8P40818 1118 aa18.69■□□□□ 0.58
CDH23-207ENST00000442677 RBM25P49756 843 aaKnown RBP18.69■□□□□ 0.58
CDH23-207ENST00000442677 CNTROBQ8N137 903 aa18.69■□□□□ 0.58
CDH23-207ENST00000442677 INCENPQ9NQS7 918 aa18.69■□□□□ 0.58
CDH23-207ENST00000442677 EVA1CP58658 441 aa18.68■□□□□ 0.58
CDH23-207ENST00000442677 LRRCC1Q9C099 1032 aa18.68■□□□□ 0.58
CDH23-207ENST00000442677 ZNHIT6Q9NWK9 470 aaKnown RBP18.68■□□□□ 0.58
CDH23-207ENST00000442677 DDX58O95786 925 aaKnown RBP18.68■□□□□ 0.58
CDH23-207ENST00000442677 PPFIBP1Q86W92 1011 aa18.68■□□□□ 0.58
CDH23-207ENST00000442677 TICAM2Q86XR7 235 aa18.68■□□□□ 0.58
CDH23-207ENST00000442677 CDK5RAP3Q96JB5 506 aa18.68■□□□□ 0.58
CDH23-207ENST00000442677 CWC22Q9HCG8 908 aaKnown RBP18.68■□□□□ 0.58
CDH23-207ENST00000442677 LRRFIP2Q9Y608 721 aaKnown RBP18.68■□□□□ 0.58
CDH23-207ENST00000442677 PAF1Q8N7H5 531 aa18.68■□□□□ 0.58
CDH23-207ENST00000442677 TNMDQ9H2S6 317 aa18.68■□□□□ 0.58
CDH23-207ENST00000442677 ERLIN1O75477 346 aa18.67■□□□□ 0.58
CDH23-207ENST00000442677 TMEM132AQ24JP5 1023 aa18.67■□□□□ 0.58
CDH23-207ENST00000442677 CCDC192P0DO97 292 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms