RNA–Protein interactions for RNA: ENST00000440711.1

LINC01006-205, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 336 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-205ENST00000440711 SOS2Q07890 1332 aaPredicted RBP13.48□□□□□ -0.25
LINC01006-205ENST00000440711 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
LINC01006-205ENST00000440711 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
LINC01006-205ENST00000440711 ASXL1Q8IXJ9 1541 aa13.48□□□□□ -0.25
LINC01006-205ENST00000440711 COL16A1Q07092 1604 aaPredicted RBP13.47□□□□□ -0.25
LINC01006-205ENST00000440711 DDX17Q92841 729 aaKnown RBP13.47□□□□□ -0.25
LINC01006-205ENST00000440711 POGKQ9P215 609 aa13.47□□□□□ -0.25
LINC01006-205ENST00000440711 NPHP3Q7Z494 1330 aa13.46□□□□□ -0.25
LINC01006-205ENST00000440711 NUTM2BA6NNL0 878 aaPredicted RBP13.45□□□□□ -0.26
LINC01006-205ENST00000440711 NUTM2EB1AL46 878 aaPredicted RBP13.45□□□□□ -0.26
LINC01006-205ENST00000440711 NUTM2AQ8IVF1 878 aaPredicted RBP13.45□□□□□ -0.26
LINC01006-205ENST00000440711 UPF1Q92900 1129 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC01006-205ENST00000440711 PRAM1Q96QH2 718 aa13.45□□□□□ -0.26
LINC01006-205ENST00000440711 FOXO3O43524 673 aa13.44□□□□□ -0.26
LINC01006-205ENST00000440711 IFT172Q9UG01 1749 aa13.44□□□□□ -0.26
LINC01006-205ENST00000440711 PLEKHH1Q9ULM0 1364 aa13.44□□□□□ -0.26
LINC01006-205ENST00000440711 SRCAPQ6ZRS2 3230 aa13.43□□□□□ -0.26
LINC01006-205ENST00000440711 NALCNQ8IZF0 1738 aa13.42□□□□□ -0.26
LINC01006-205ENST00000440711 TRAK1Q9UPV9 953 aa13.42□□□□□ -0.26
LINC01006-205ENST00000440711 NUTM2FA1L443 756 aa13.41□□□□□ -0.26
LINC01006-205ENST00000440711 PSME1Q06323 249 aa13.41□□□□□ -0.26
LINC01006-205ENST00000440711 PNPLA6Q8IY17 1366 aa13.41□□□□□ -0.26
LINC01006-205ENST00000440711 SAFB2Q14151 953 aaKnown RBP eCLIP13.4□□□□□ -0.26
LINC01006-205ENST00000440711 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
LINC01006-205ENST00000440711 CDC42BPGQ6DT37 1551 aa13.4□□□□□ -0.26
LINC01006-205ENST00000440711 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
LINC01006-205ENST00000440711 RXRBP28702 533 aa13.39□□□□□ -0.27
LINC01006-205ENST00000440711 KRT28Q7Z3Y7 464 aa13.39□□□□□ -0.27
LINC01006-205ENST00000440711 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
LINC01006-205ENST00000440711 SHPRHQ149N8 1683 aa13.39□□□□□ -0.27
LINC01006-205ENST00000440711 LAMC1P11047 1609 aa13.39□□□□□ -0.27
LINC01006-205ENST00000440711 DLC1Q96QB1 1528 aa13.39□□□□□ -0.27
LINC01006-205ENST00000440711 LRP6O75581 1613 aa13.38□□□□□ -0.27
LINC01006-205ENST00000440711 WASLO00401 505 aaPredicted RBP13.37□□□□□ -0.27
LINC01006-205ENST00000440711 C8orf37Q96NL8 207 aa13.37□□□□□ -0.27
LINC01006-205ENST00000440711 QTRT2Q9H974 415 aaKnown RBP13.37□□□□□ -0.27
LINC01006-205ENST00000440711 AFF2P51816 1311 aa13.37□□□□□ -0.27
LINC01006-205ENST00000440711 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
LINC01006-205ENST00000440711 ADAMTS2O95450 1211 aa13.36□□□□□ -0.27
LINC01006-205ENST00000440711 FNBP4Q8N3X1 1017 aaPredicted RBP13.36□□□□□ -0.27
LINC01006-205ENST00000440711 ADGRB1O14514 1584 aa13.36□□□□□ -0.27
LINC01006-205ENST00000440711 SPATA31A3Q5VYP0 1347 aa13.36□□□□□ -0.27
LINC01006-205ENST00000440711 EIF3AQ14152 1382 aaKnown RBP13.35□□□□□ -0.27
LINC01006-205ENST00000440711 XPCQ01831 940 aaPredicted RBP13.35□□□□□ -0.27
LINC01006-205ENST00000440711 ANKARQ7Z5J8 1434 aa13.34□□□□□ -0.27
LINC01006-205ENST00000440711 RBM6P78332 1123 aaKnown RBP13.34□□□□□ -0.27
LINC01006-205ENST00000440711 L3MBTL2Q969R5 705 aa13.34□□□□□ -0.27
LINC01006-205ENST00000440711 MINK1Q8N4C8 1332 aaPredicted RBP13.34□□□□□ -0.27
LINC01006-205ENST00000440711 TRIM26Q12899 539 aaPredicted RBP13.33□□□□□ -0.28
LINC01006-205ENST00000440711 NBPF1Q3BBV0 1214 aa13.33□□□□□ -0.28
LINC01006-205ENST00000440711 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.28
LINC01006-205ENST00000440711 USP21Q9UK80 565 aa13.33□□□□□ -0.28
LINC01006-205ENST00000440711 PXDNQ92626 1479 aa13.33□□□□□ -0.28
LINC01006-205ENST00000440711 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
LINC01006-205ENST00000440711 PMFBP1Q8TBY8 1022 aa13.32□□□□□ -0.28
LINC01006-205ENST00000440711 SIN3AQ96ST3 1273 aa13.32□□□□□ -0.28
LINC01006-205ENST00000440711 TRPC5Q9UL62 973 aaPredicted RBP13.32□□□□□ -0.28
LINC01006-205ENST00000440711 NEUROD1Q13562 356 aa13.31□□□□□ -0.28
LINC01006-205ENST00000440711 NUDT16Q96DE0 195 aaKnown RBP13.31□□□□□ -0.28
LINC01006-205ENST00000440711 CDK19Q9BWU1 502 aa13.31□□□□□ -0.28
LINC01006-205ENST00000440711 NGDNQ8NEJ9 315 aaKnown RBP13.3□□□□□ -0.28
LINC01006-205ENST00000440711 CCDC61Q9Y6R9 512 aa13.3□□□□□ -0.28
LINC01006-205ENST00000440711 GPRASP1Q5JY77 1395 aa13.3□□□□□ -0.28
LINC01006-205ENST00000440711 FMN2Q9NZ56 1722 aa13.29□□□□□ -0.28
LINC01006-205ENST00000440711 ARHGEF10O15013 1369 aa13.29□□□□□ -0.28
LINC01006-205ENST00000440711 CDK12Q9NYV4 1490 aaPredicted RBP13.29□□□□□ -0.28
LINC01006-205ENST00000440711 LMOD2Q6P5Q4 547 aa13.28□□□□□ -0.28
LINC01006-205ENST00000440711 PRR36Q9H6K5 1346 aa13.28□□□□□ -0.28
LINC01006-205ENST00000440711 PLEKHG3A1L390 1219 aa13.27□□□□□ -0.29
LINC01006-205ENST00000440711 HAP1P54257 671 aaPredicted RBP13.27□□□□□ -0.29
LINC01006-205ENST00000440711 COL22A1Q8NFW1 1626 aaPredicted RBP13.27□□□□□ -0.29
LINC01006-205ENST00000440711 ADGRB2O60241 1585 aa13.26□□□□□ -0.29
LINC01006-205ENST00000440711 KIF1AQ12756 1690 aa13.26□□□□□ -0.29
LINC01006-205ENST00000440711 UNC5CLQ8IV45 518 aa13.26□□□□□ -0.29
LINC01006-205ENST00000440711 CENPJQ9HC77 1338 aaPredicted RBP13.26□□□□□ -0.29
LINC01006-205ENST00000440711 TNS3Q68CZ2 1445 aa13.25□□□□□ -0.29
LINC01006-205ENST00000440711 NBPF8Q3BBV2 869 aa13.25□□□□□ -0.29
LINC01006-205ENST00000440711 GJD4Q96KN9 370 aaPredicted RBP13.25□□□□□ -0.29
LINC01006-205ENST00000440711 KIAA1210Q9ULL0 1709 aa13.25□□□□□ -0.29
LINC01006-205ENST00000440711 TULP4Q9NRJ4 1543 aa13.24□□□□□ -0.29
LINC01006-205ENST00000440711 CABLES1Q8TDN4 633 aa13.24□□□□□ -0.29
LINC01006-205ENST00000440711 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
LINC01006-205ENST00000440711 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
LINC01006-205ENST00000440711 FAM83GA6ND36 823 aa13.22□□□□□ -0.29
LINC01006-205ENST00000440711 SRPK2P78362 688 aaKnown RBP13.22□□□□□ -0.29
LINC01006-205ENST00000440711 ATRNO75882 1429 aa13.22□□□□□ -0.29
LINC01006-205ENST00000440711 ACEP12821 1306 aa13.21□□□□□ -0.29
LINC01006-205ENST00000440711 POLR3AO14802 1390 aaPredicted RBP13.2□□□□□ -0.3
LINC01006-205ENST00000440711 EVC2Q86UK5 1308 aa13.2□□□□□ -0.3
LINC01006-205ENST00000440711 VPS72Q15906 364 aa13.2□□□□□ -0.3
LINC01006-205ENST00000440711 USP32Q8NFA0 1604 aa13.2□□□□□ -0.3
LINC01006-205ENST00000440711 RGPD8O14715 1765 aaPredicted RBP13.2□□□□□ -0.3
LINC01006-205ENST00000440711 ROCK2O75116 1388 aaKnown RBP13.2□□□□□ -0.3
LINC01006-205ENST00000440711 SLIT2O94813 1529 aa13.19□□□□□ -0.3
LINC01006-205ENST00000440711 ONECUT3O60422 494 aaPredicted RBP13.19□□□□□ -0.3
LINC01006-205ENST00000440711 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
LINC01006-205ENST00000440711 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
LINC01006-205ENST00000440711 BRD4O60885 1362 aaPredicted RBP13.19□□□□□ -0.3
LINC01006-205ENST00000440711 ATP7BP35670 1465 aa13.18□□□□□ -0.3
LINC01006-205ENST00000440711 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms