RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 GRXCR2A6NFK2 248 aa7.6□□□□□ -1.19
LINC01549-201ENST00000440664 PDIA6Q15084 440 aa7.6□□□□□ -1.19
LINC01549-201ENST00000440664 PAXIP1Q6ZW49 1069 aaPredicted RBP7.6□□□□□ -1.19
LINC01549-201ENST00000440664 REPIN1Q9BWE0 567 aaKnown RBP7.59□□□□□ -1.19
LINC01549-201ENST00000440664 DNAJB2P25686 324 aa7.58□□□□□ -1.2
LINC01549-201ENST00000440664 PUS10Q3MIT2 529 aaKnown RBP7.58□□□□□ -1.2
LINC01549-201ENST00000440664 Q8N3U1 123 aa7.58□□□□□ -1.2
LINC01549-201ENST00000440664 CFAP44Q96MT7 982 aa7.58□□□□□ -1.2
LINC01549-201ENST00000440664 TRIM32Q13049 653 aa7.56□□□□□ -1.2
LINC01549-201ENST00000440664 CAPN5O15484 640 aaPredicted RBP7.55□□□□□ -1.2
LINC01549-201ENST00000440664 SPDYE16A6NNV3 312 aaPredicted RBP7.54□□□□□ -1.2
LINC01549-201ENST00000440664 BTBD11A6QL63 1104 aa7.54□□□□□ -1.2
LINC01549-201ENST00000440664 ZFP42Q96MM3 310 aa7.54□□□□□ -1.2
LINC01549-201ENST00000440664 TMEM134Q9H6X4 195 aa7.54□□□□□ -1.2
LINC01549-201ENST00000440664 MSTNO14793 375 aa7.53□□□□□ -1.2
LINC01549-201ENST00000440664 ALDH1A1P00352 501 aa7.53□□□□□ -1.2
LINC01549-201ENST00000440664 KANK3Q6NY19 840 aa7.53□□□□□ -1.2
LINC01549-201ENST00000440664 PRDM9Q9NQV7 894 aa7.52□□□□□ -1.21
LINC01549-201ENST00000440664 SLC10A3P09131 477 aa7.51□□□□□ -1.21
LINC01549-201ENST00000440664 SVOPQ8N4V2 548 aa7.5□□□□□ -1.21
LINC01549-201ENST00000440664 ARIH1Q9Y4X5 557 aaPredicted RBP7.5□□□□□ -1.21
LINC01549-201ENST00000440664 FAM160A2Q8N612 972 aaPredicted RBP7.49□□□□□ -1.21
LINC01549-201ENST00000440664 SOBPA7XYQ1 873 aa7.48□□□□□ -1.21
LINC01549-201ENST00000440664 OSBPP22059 807 aa7.48□□□□□ -1.21
LINC01549-201ENST00000440664 MARSP56192 900 aaKnown RBP7.48□□□□□ -1.21
LINC01549-201ENST00000440664 E2F4Q16254 413 aa7.48□□□□□ -1.21
LINC01549-201ENST00000440664 NPDC1Q9NQX5 325 aaPredicted RBP7.48□□□□□ -1.21
LINC01549-201ENST00000440664 RC3H1Q5TC82 1133 aaKnown RBP7.47□□□□□ -1.21
LINC01549-201ENST00000440664 RBM46Q8TBY0 533 aaKnown RBP7.47□□□□□ -1.21
LINC01549-201ENST00000440664 KRTAP9-9Q9BYP9 154 aa7.47□□□□□ -1.21
LINC01549-201ENST00000440664 KRTAP9-4Q9BYQ2 154 aa7.47□□□□□ -1.21
LINC01549-201ENST00000440664 FMNL1O95466 1100 aaPredicted RBP7.46□□□□□ -1.22
LINC01549-201ENST00000440664 GALNT6Q8NCL4 622 aa7.46□□□□□ -1.22
LINC01549-201ENST00000440664 CNTNAP3BQ96NU0 1288 aa7.46□□□□□ -1.22
LINC01549-201ENST00000440664 SPOCK3Q9BQ16 436 aa7.46□□□□□ -1.22
LINC01549-201ENST00000440664 CNTNAP3Q9BZ76 1288 aa7.46□□□□□ -1.22
LINC01549-201ENST00000440664 TSHZ2Q9NRE2 1034 aa7.46□□□□□ -1.22
LINC01549-201ENST00000440664 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
LINC01549-201ENST00000440664 K7ELQ4 463 aaPredicted RBP7.45□□□□□ -1.22
LINC01549-201ENST00000440664 THAP11Q96EK4 314 aa7.45□□□□□ -1.22
LINC01549-201ENST00000440664 KRTAP4-12Q9BQ66 201 aa7.45□□□□□ -1.22
LINC01549-201ENST00000440664 WDR70Q9NW82 654 aa7.45□□□□□ -1.22
LINC01549-201ENST00000440664 WASF2Q9Y6W5 498 aa7.45□□□□□ -1.22
LINC01549-201ENST00000440664 RCCD1A6NED2 376 aa7.44□□□□□ -1.22
LINC01549-201ENST00000440664 ZNF385CQ66K41 422 aaPredicted RBP7.44□□□□□ -1.22
LINC01549-201ENST00000440664 SCARF2Q96GP6 870 aaPredicted RBP7.44□□□□□ -1.22
LINC01549-201ENST00000440664 FECHP22830 423 aa7.43□□□□□ -1.22
LINC01549-201ENST00000440664 KRT76Q01546 638 aa7.43□□□□□ -1.22
LINC01549-201ENST00000440664 PLA2G4EQ3MJ16 856 aa7.43□□□□□ -1.22
LINC01549-201ENST00000440664 SCARF1Q14162 830 aa7.42□□□□□ -1.22
LINC01549-201ENST00000440664 PPFIA3O75145 1194 aa7.41□□□□□ -1.22
LINC01549-201ENST00000440664 MORN1Q5T089 497 aa7.41□□□□□ -1.22
LINC01549-201ENST00000440664 RSPH4AQ5TD94 716 aa7.41□□□□□ -1.22
LINC01549-201ENST00000440664 PURBQ96QR8 312 aaKnown RBP7.41□□□□□ -1.22
LINC01549-201ENST00000440664 PLCB2Q00722 1185 aa7.39□□□□□ -1.23
LINC01549-201ENST00000440664 MRPL14Q6P1L8 145 aaKnown RBP7.39□□□□□ -1.23
LINC01549-201ENST00000440664 MAN1A2O60476 641 aa7.38□□□□□ -1.23
LINC01549-201ENST00000440664 WNT7BP56706 349 aa7.38□□□□□ -1.23
LINC01549-201ENST00000440664 SKOR1P84550 965 aa7.38□□□□□ -1.23
LINC01549-201ENST00000440664 MSS51Q4VC12 460 aa7.38□□□□□ -1.23
LINC01549-201ENST00000440664 SLC27A5Q9Y2P5 690 aa7.37□□□□□ -1.23
LINC01549-201ENST00000440664 ADGRG1Q9Y653 693 aa7.37□□□□□ -1.23
LINC01549-201ENST00000440664 WHAMMQ8TF30 809 aa7.36□□□□□ -1.23
LINC01549-201ENST00000440664 ARHGEF1Q92888 912 aaKnown RBP7.36□□□□□ -1.23
LINC01549-201ENST00000440664 ARHGEF15O94989 841 aa7.35□□□□□ -1.23
LINC01549-201ENST00000440664 PROCP04070 461 aa7.35□□□□□ -1.23
LINC01549-201ENST00000440664 COL25A1Q9BXS0 654 aaPredicted RBP7.35□□□□□ -1.23
LINC01549-201ENST00000440664 FUT2Q10981 343 aa7.34□□□□□ -1.23
LINC01549-201ENST00000440664 BRICD5Q6PL45 260 aa7.34□□□□□ -1.23
LINC01549-201ENST00000440664 GPR161Q8N6U8 529 aaKnown RBP7.34□□□□□ -1.23
LINC01549-201ENST00000440664 KCNV2Q8TDN2 545 aa7.34□□□□□ -1.23
LINC01549-201ENST00000440664 ATP6V1AP38606 617 aa7.33□□□□□ -1.24
LINC01549-201ENST00000440664 FAM161AQ3B820 660 aa7.33□□□□□ -1.24
LINC01549-201ENST00000440664 CCDC24Q8N4L8 307 aa7.33□□□□□ -1.24
LINC01549-201ENST00000440664 EHBP1Q8NDI1 1231 aa7.33□□□□□ -1.24
LINC01549-201ENST00000440664 SALL2Q9Y467 1007 aaPredicted RBP7.33□□□□□ -1.24
LINC01549-201ENST00000440664 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.32□□□□□ -1.24
LINC01549-201ENST00000440664 DCAF5Q96JK2 942 aa7.32□□□□□ -1.24
LINC01549-201ENST00000440664 ITGB2P05107 769 aa7.31□□□□□ -1.24
LINC01549-201ENST00000440664 SIAH2O43255 324 aa7.3□□□□□ -1.24
LINC01549-201ENST00000440664 RNF19BQ6ZMZ0 732 aa7.3□□□□□ -1.24
LINC01549-201ENST00000440664 MMP16P51512 607 aa7.29□□□□□ -1.24
LINC01549-201ENST00000440664 RDH13Q8NBN7 331 aa7.29□□□□□ -1.24
LINC01549-201ENST00000440664 RNFT1Q5M7Z0 435 aa7.28□□□□□ -1.24
LINC01549-201ENST00000440664 P3H3Q8IVL6 736 aa7.28□□□□□ -1.24
LINC01549-201ENST00000440664 PHF20L1A8MW92 1017 aa7.26□□□□□ -1.25
LINC01549-201ENST00000440664 SLURP2P0DP57 97 aa7.26□□□□□ -1.25
LINC01549-201ENST00000440664 MLLT3P42568 568 aaPredicted RBP7.26□□□□□ -1.25
LINC01549-201ENST00000440664 FURINP09958 794 aa7.25□□□□□ -1.25
LINC01549-201ENST00000440664 BAG6P46379 1132 aa7.25□□□□□ -1.25
LINC01549-201ENST00000440664 MAP3K10Q02779 954 aa7.25□□□□□ -1.25
LINC01549-201ENST00000440664 C6orf118Q5T5N4 469 aa7.25□□□□□ -1.25
LINC01549-201ENST00000440664 WDR4P57081 412 aaKnown RBP7.23□□□□□ -1.25
LINC01549-201ENST00000440664 NNTQ13423 1086 aa7.23□□□□□ -1.25
LINC01549-201ENST00000440664 DXOO77932 396 aaKnown RBP7.22□□□□□ -1.25
LINC01549-201ENST00000440664 ADH1CP00326 375 aa7.22□□□□□ -1.25
LINC01549-201ENST00000440664 TIMP2P16035 220 aa7.22□□□□□ -1.25
LINC01549-201ENST00000440664 PTGDRQ13258 359 aa7.22□□□□□ -1.25
LINC01549-201ENST00000440664 KRTAP4-7Q9BYR0 210 aa7.22□□□□□ -1.25
LINC01549-201ENST00000440664 HAP1P54257 671 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms