RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 MINK1Q8N4C8 1332 aaPredicted RBP38.56■■■■□ 3.76
CGREF1-207ENST00000440612 LMTK3Q96Q04 1460 aa38.55■■■■□ 3.76
CGREF1-207ENST00000440612 XRN1Q8IZH2 1706 aaKnown RBP38.55■■■■□ 3.76
CGREF1-207ENST00000440612 ANP32CO43423 234 aa38.54■■■■□ 3.76
CGREF1-207ENST00000440612 AMOTL2Q9Y2J4 779 aa38.54■■■■□ 3.76
CGREF1-207ENST00000440612 PER1O15534 1290 aaPredicted RBP38.53■■■■□ 3.76
CGREF1-207ENST00000440612 PANK3Q9H999 370 aa38.51■■■■□ 3.76
CGREF1-207ENST00000440612 PTCH1Q13635 1447 aa38.51■■■■□ 3.75
CGREF1-207ENST00000440612 HSPA2P54652 639 aa38.46■■■■□ 3.75
CGREF1-207ENST00000440612 CABP2Q9NPB3 220 aa38.46■■■■□ 3.75
CGREF1-207ENST00000440612 CHD2O14647 1828 aaKnown RBP38.43■■■■□ 3.74
CGREF1-207ENST00000440612 PRKRIP1Q9H875 184 aaPredicted RBP38.43■■■■□ 3.74
CGREF1-207ENST00000440612 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.43■■■■□ 3.74
CGREF1-207ENST00000440612 KCNA6P17658 529 aa38.42■■■■□ 3.74
CGREF1-207ENST00000440612 CDK19Q9BWU1 502 aa38.42■■■■□ 3.74
CGREF1-207ENST00000440612 ADGRB2O60241 1585 aa38.38■■■■□ 3.74
CGREF1-207ENST00000440612 SRPK2P78362 688 aaKnown RBP38.37■■■■□ 3.73
CGREF1-207ENST00000440612 SLC12A5Q9H2X9 1139 aa38.37■■■■□ 3.73
CGREF1-207ENST00000440612 WASLO00401 505 aaPredicted RBP38.36■■■■□ 3.73
CGREF1-207ENST00000440612 ATAD2Q6PL18 1390 aa38.34■■■■□ 3.73
CGREF1-207ENST00000440612 CCER2I3L3R5 266 aa38.33■■■■□ 3.73
CGREF1-207ENST00000440612 CARD14Q9BXL6 1004 aa38.32■■■■□ 3.72
CGREF1-207ENST00000440612 TMC1Q8TDI8 760 aa38.3■■■■□ 3.72
CGREF1-207ENST00000440612 NWD1Q149M9 1564 aa38.3■■■■□ 3.72
CGREF1-207ENST00000440612 NINLQ9Y2I6 1382 aa38.29■■■■□ 3.72
CGREF1-207ENST00000440612 STRCQ7RTU9 1775 aa38.29■■■■□ 3.72
CGREF1-207ENST00000440612 AMER1Q5JTC6 1135 aaPredicted RBP38.27■■■■□ 3.72
CGREF1-207ENST00000440612 CD163L1Q9NR16 1453 aa38.25■■■■□ 3.71
CGREF1-207ENST00000440612 ANKRD36BQ8N2N9 1353 aa38.24■■■■□ 3.71
CGREF1-207ENST00000440612 KNSTRNQ9Y448 316 aa38.23■■■■□ 3.71
CGREF1-207ENST00000440612 PARD3Q8TEW0 1356 aa38.22■■■■□ 3.71
CGREF1-207ENST00000440612 ATP7BP35670 1465 aa38.21■■■■□ 3.71
CGREF1-207ENST00000440612 KTN1Q86UP2 1357 aaKnown RBP38.21■■■■□ 3.71
CGREF1-207ENST00000440612 PRR36Q9H6K5 1346 aa38.21■■■■□ 3.71
CGREF1-207ENST00000440612 CNGB1Q14028 1251 aaPredicted RBP38.2■■■■□ 3.71
CGREF1-207ENST00000440612 NPC1L1Q9UHC9 1359 aa38.2■■■■□ 3.71
CGREF1-207ENST00000440612 NUDT16Q96DE0 195 aaKnown RBP38.18■■■■□ 3.7
CGREF1-207ENST00000440612 CABP1Q9NZU7 370 aa38.18■■■■□ 3.7
CGREF1-207ENST00000440612 A0A1W2PP64 1363 aa38.18■■■■□ 3.7
CGREF1-207ENST00000440612 RALBP1Q15311 655 aa38.17■■■■□ 3.7
CGREF1-207ENST00000440612 NSD3Q9BZ95 1437 aa38.16■■■■□ 3.7
CGREF1-207ENST00000440612 CCDC184Q52MB2 194 aa38.15■■■■□ 3.7
CGREF1-207ENST00000440612 CC2D1BQ5T0F9 858 aaKnown RBP38.15■■■■□ 3.7
CGREF1-207ENST00000440612 NALCNQ8IZF0 1738 aa38.13■■■■□ 3.69
CGREF1-207ENST00000440612 CCDC61Q9Y6R9 512 aa38.12■■■■□ 3.69
CGREF1-207ENST00000440612 PPIP5K1Q6PFW1 1433 aa38.12■■■■□ 3.69
CGREF1-207ENST00000440612 NKTRP30414 1462 aaKnown RBP38.12■■■■□ 3.69
CGREF1-207ENST00000440612 USP32Q8NFA0 1604 aa38.12■■■■□ 3.69
CGREF1-207ENST00000440612 STRCP1A6NGW2 1772 aa38.11■■■■□ 3.69
CGREF1-207ENST00000440612 RBM33Q96EV2 1170 aaKnown RBP38.11■■■■□ 3.69
CGREF1-207ENST00000440612 TOPAZ1Q8N9V7 1692 aa38.1■■■■□ 3.69
CGREF1-207ENST00000440612 ADGRL3Q9HAR2 1447 aa38.09■■■■□ 3.69
CGREF1-207ENST00000440612 TERF2IPQ9NYB0 399 aa38.08■■■■□ 3.69
CGREF1-207ENST00000440612 CPSF1Q10570 1443 aaKnown RBP38.08■■■■□ 3.69
CGREF1-207ENST00000440612 CDC42BPGQ6DT37 1551 aa38.08■■■■□ 3.69
CGREF1-207ENST00000440612 MYBBP1AQ9BQG0 1328 aaKnown RBP38.06■■■■□ 3.68
CGREF1-207ENST00000440612 FMN2Q9NZ56 1722 aa38.04■■■■□ 3.68
CGREF1-207ENST00000440612 NUTM2FA1L443 756 aa38.02■■■■□ 3.68
CGREF1-207ENST00000440612 HDGFL2Q7Z4V5 671 aaPredicted RBP38.01■■■■□ 3.67
CGREF1-207ENST00000440612 ANKARQ7Z5J8 1434 aa38■■■■□ 3.67
CGREF1-207ENST00000440612 PLEKHG3A1L390 1219 aa38■■■■□ 3.67
CGREF1-207ENST00000440612 PROSER2Q86WR7 435 aaPredicted RBP38■■■■□ 3.67
CGREF1-207ENST00000440612 CGNL1Q0VF96 1302 aa37.98■■■■□ 3.67
CGREF1-207ENST00000440612 MRS2Q9HD23 443 aa37.96■■■■□ 3.67
CGREF1-207ENST00000440612 AKAP12Q02952 1782 aa37.94■■■■□ 3.66
CGREF1-207ENST00000440612 BRD4O60885 1362 aaPredicted RBP37.94■■■■□ 3.66
CGREF1-207ENST00000440612 NLRP13Q86W25 1043 aa37.93■■■■□ 3.66
CGREF1-207ENST00000440612 RGPD8O14715 1765 aaPredicted RBP37.93■■■■□ 3.66
CGREF1-207ENST00000440612 MON2Q7Z3U7 1717 aa37.93■■■■□ 3.66
CGREF1-207ENST00000440612 NSD2O96028 1365 aa37.92■■■■□ 3.66
CGREF1-207ENST00000440612 TMEM94Q12767 1356 aa37.92■■■■□ 3.66
CGREF1-207ENST00000440612 ITSN1Q15811 1721 aa37.92■■■■□ 3.66
CGREF1-207ENST00000440612 NCOA3Q9Y6Q9 1424 aa37.91■■■■□ 3.66
CGREF1-207ENST00000440612 PPP2R1AP30153 589 aa37.9■■■■□ 3.66
CGREF1-207ENST00000440612 YTHDC1Q96MU7 727 aaKnown RBP37.9■■■■□ 3.66
CGREF1-207ENST00000440612 EDC4Q6P2E9 1401 aaKnown RBP37.89■■■■□ 3.66
CGREF1-207ENST00000440612 ACEP12821 1306 aa37.89■■■■□ 3.66
CGREF1-207ENST00000440612 FYB1O15117 783 aa37.88■■■■□ 3.66
CGREF1-207ENST00000440612 POLR3AO14802 1390 aaPredicted RBP37.88■■■■□ 3.65
CGREF1-207ENST00000440612 ZNF692Q9BU19 519 aaPredicted RBP37.87■■■■□ 3.65
CGREF1-207ENST00000440612 ZNF335Q9H4Z2 1342 aaPredicted RBP37.87■■■■□ 3.65
CGREF1-207ENST00000440612 C14orf37Q86TY3 774 aa37.85■■■■□ 3.65
CGREF1-207ENST00000440612 C19orf44Q9H6X5 657 aa37.85■■■■□ 3.65
CGREF1-207ENST00000440612 NRKQ7Z2Y5 1582 aa37.84■■■■□ 3.65
CGREF1-207ENST00000440612 SSH2Q76I76 1423 aa37.83■■■■□ 3.65
CGREF1-207ENST00000440612 PMFBP1Q8TBY8 1022 aa37.82■■■■□ 3.65
CGREF1-207ENST00000440612 DMRT2Q9Y5R5 561 aa37.82■■■■□ 3.65
CGREF1-207ENST00000440612 USP6P35125 1406 aa37.82■■■■□ 3.64
CGREF1-207ENST00000440612 MORC1Q86VD1 984 aa37.82■■■■□ 3.64
CGREF1-207ENST00000440612 LRRC7Q96NW7 1537 aa37.81■■■■□ 3.64
CGREF1-207ENST00000440612 GGNBP2Q9H3C7 697 aa37.81■■■■□ 3.64
CGREF1-207ENST00000440612 PNISRQ8TF01 805 aaKnown RBP37.8■■■■□ 3.64
CGREF1-207ENST00000440612 XIRP1Q702N8 1843 aaKnown RBP37.8■■■■□ 3.64
CGREF1-207ENST00000440612 KIF20BQ96Q89 1820 aa37.79■■■■□ 3.64
CGREF1-207ENST00000440612 ANKRD26Q9UPS8 1709 aa37.79■■■■□ 3.64
CGREF1-207ENST00000440612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.79■■■■□ 3.64
CGREF1-207ENST00000440612 DCCP43146 1447 aa37.78■■■■□ 3.64
CGREF1-207ENST00000440612 TTC21BQ7Z4L5 1316 aa37.74■■■■□ 3.63
CGREF1-207ENST00000440612 NME9Q86XW9 330 aa37.72■■■■□ 3.63
CGREF1-207ENST00000440612 PHF8Q9UPP1 1060 aa37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms