RNA–Protein interactions for RNA: ENST00000440318.5

FAM3A-213, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-213ENST00000440318 PXDNQ92626 1479 aa20.3■□□□□ 0.84
FAM3A-213ENST00000440318 PRAG1Q86YV5 1406 aa20.29■□□□□ 0.84
FAM3A-213ENST00000440318 GJD4Q96KN9 370 aaPredicted RBP20.29■□□□□ 0.84
FAM3A-213ENST00000440318 GLI3P10071 1580 aa20.27■□□□□ 0.84
FAM3A-213ENST00000440318 PPARGC1BQ86YN6 1023 aaKnown RBP20.27■□□□□ 0.84
FAM3A-213ENST00000440318 BLMP54132 1417 aaPredicted RBP20.27■□□□□ 0.83
FAM3A-213ENST00000440318 ITGAEP38570 1179 aa20.26■□□□□ 0.83
FAM3A-213ENST00000440318 XPCQ01831 940 aaPredicted RBP20.26■□□□□ 0.83
FAM3A-213ENST00000440318 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.26■□□□□ 0.83
FAM3A-213ENST00000440318 KIF1BO60333 1816 aa20.25■□□□□ 0.83
FAM3A-213ENST00000440318 NPHP3Q7Z494 1330 aa20.25■□□□□ 0.83
FAM3A-213ENST00000440318 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
FAM3A-213ENST00000440318 DEFB132Q7Z7B7 95 aa20.24■□□□□ 0.83
FAM3A-213ENST00000440318 HFM1A2PYH4 1435 aa20.24■□□□□ 0.83
FAM3A-213ENST00000440318 CDC42BPGQ6DT37 1551 aa20.24■□□□□ 0.83
FAM3A-213ENST00000440318 ESCO1Q5FWF5 840 aa20.23■□□□□ 0.83
FAM3A-213ENST00000440318 BRWD3Q6RI45 1802 aa20.23■□□□□ 0.83
FAM3A-213ENST00000440318 LRP5O75197 1615 aa20.22■□□□□ 0.83
FAM3A-213ENST00000440318 FOXO3O43524 673 aa20.21■□□□□ 0.83
FAM3A-213ENST00000440318 SLIT2O94813 1529 aa20.21■□□□□ 0.83
FAM3A-213ENST00000440318 VGFO15240 615 aaPredicted RBP20.19■□□□□ 0.82
FAM3A-213ENST00000440318 UNC5CLQ8IV45 518 aa20.19■□□□□ 0.82
FAM3A-213ENST00000440318 NAIPQ13075 1403 aa20.16■□□□□ 0.82
FAM3A-213ENST00000440318 USP32Q8NFA0 1604 aa20.16■□□□□ 0.82
FAM3A-213ENST00000440318 PPLO60437 1756 aa20.16■□□□□ 0.82
FAM3A-213ENST00000440318 NUTM2FA1L443 756 aa20.15■□□□□ 0.82
FAM3A-213ENST00000440318 SEPT12Q8IYM1 358 aa20.14■□□□□ 0.81
FAM3A-213ENST00000440318 LRPPRCP42704 1394 aaKnown RBP20.13■□□□□ 0.81
FAM3A-213ENST00000440318 SPATA31A3Q5VYP0 1347 aa20.13■□□□□ 0.81
FAM3A-213ENST00000440318 SF3B2Q13435 895 aaKnown RBP20.12■□□□□ 0.81
FAM3A-213ENST00000440318 RPGRIP1LQ68CZ1 1315 aa20.11■□□□□ 0.81
FAM3A-213ENST00000440318 PSDA5PKW4 1024 aaPredicted RBP20.11■□□□□ 0.81
FAM3A-213ENST00000440318 WAPLQ7Z5K2 1190 aa20.1■□□□□ 0.81
FAM3A-213ENST00000440318 PLCH1Q4KWH8 1693 aa20.1■□□□□ 0.81
FAM3A-213ENST00000440318 TECPR2O15040 1411 aa20.09■□□□□ 0.81
FAM3A-213ENST00000440318 PLEKHH1Q9ULM0 1364 aa20.08■□□□□ 0.81
FAM3A-213ENST00000440318 FMN2Q9NZ56 1722 aa20.08■□□□□ 0.81
FAM3A-213ENST00000440318 KIF1AQ12756 1690 aa20.08■□□□□ 0.81
FAM3A-213ENST00000440318 VPS72Q15906 364 aa20.08■□□□□ 0.81
FAM3A-213ENST00000440318 CCDC144AA2RUR9 1427 aa20.08■□□□□ 0.8
FAM3A-213ENST00000440318 ONECUT3O60422 494 aaPredicted RBP20.07■□□□□ 0.8
FAM3A-213ENST00000440318 HRCP23327 699 aa20.07■□□□□ 0.8
FAM3A-213ENST00000440318 KRT27Q7Z3Y8 459 aa20.07■□□□□ 0.8
FAM3A-213ENST00000440318 STK26Q9P289 416 aa20.07■□□□□ 0.8
FAM3A-213ENST00000440318 CABLES1Q8TDN4 633 aa20.06■□□□□ 0.8
FAM3A-213ENST00000440318 ADGRF5Q8IZF2 1346 aa20.05■□□□□ 0.8
FAM3A-213ENST00000440318 NWD2Q9ULI1 1742 aa20.05■□□□□ 0.8
FAM3A-213ENST00000440318 KRT28Q7Z3Y7 464 aa20.05■□□□□ 0.8
FAM3A-213ENST00000440318 ABCA3Q99758 1704 aa20.05■□□□□ 0.8
FAM3A-213ENST00000440318 TNS3Q68CZ2 1445 aa20.04■□□□□ 0.8
FAM3A-213ENST00000440318 PLEKHG5O94827 1062 aa20.04■□□□□ 0.8
FAM3A-213ENST00000440318 CCDC9Q9Y3X0 531 aaKnown RBP20.04■□□□□ 0.8
FAM3A-213ENST00000440318 KNDC1Q76NI1 1749 aa20.03■□□□□ 0.8
FAM3A-213ENST00000440318 HAP1P54257 671 aaPredicted RBP20.02■□□□□ 0.8
FAM3A-213ENST00000440318 RRBP1Q9P2E9 1410 aaKnown RBP20.02■□□□□ 0.79
FAM3A-213ENST00000440318 ABCC11Q96J66 1382 aa20.01■□□□□ 0.79
FAM3A-213ENST00000440318 BAG6P46379 1132 aa20.01■□□□□ 0.79
FAM3A-213ENST00000440318 RGPD8O14715 1765 aaPredicted RBP20■□□□□ 0.79
FAM3A-213ENST00000440318 TMEM132EQ6IEE7 984 aa20■□□□□ 0.79
FAM3A-213ENST00000440318 NRAPQ86VF7 1730 aa19.99■□□□□ 0.79
FAM3A-213ENST00000440318 IFT172Q9UG01 1749 aa19.99■□□□□ 0.79
FAM3A-213ENST00000440318 FAM83GA6ND36 823 aa19.98■□□□□ 0.79
FAM3A-213ENST00000440318 A0A0G2JS52 829 aa19.97■□□□□ 0.79
FAM3A-213ENST00000440318 MYT1Q01538 1121 aa19.97■□□□□ 0.79
FAM3A-213ENST00000440318 EN1Q05925 392 aaPredicted RBP19.97■□□□□ 0.79
FAM3A-213ENST00000440318 PHF8Q9UPP1 1060 aa19.97■□□□□ 0.79
FAM3A-213ENST00000440318 FAM98CQ17RN3 349 aaKnown RBP19.96■□□□□ 0.79
FAM3A-213ENST00000440318 SLC4A1APQ9BWU0 796 aaKnown RBP19.96■□□□□ 0.79
FAM3A-213ENST00000440318 RGPD1P0DJD0 1748 aa19.96■□□□□ 0.79
FAM3A-213ENST00000440318 SBNO1A3KN83 1393 aa19.95■□□□□ 0.79
FAM3A-213ENST00000440318 NRXN1Q9ULB1 1477 aa19.95■□□□□ 0.78
FAM3A-213ENST00000440318 R3HDM1Q15032 1099 aaKnown RBP19.95■□□□□ 0.78
FAM3A-213ENST00000440318 FAM182BQ5T319 152 aa19.95■□□□□ 0.78
FAM3A-213ENST00000440318 PIK3C2GO75747 1445 aa19.94■□□□□ 0.78
FAM3A-213ENST00000440318 SPATA31E1Q6ZUB1 1445 aa19.94■□□□□ 0.78
FAM3A-213ENST00000440318 YTHDC2Q9H6S0 1430 aaKnown RBP19.94■□□□□ 0.78
FAM3A-213ENST00000440318 PSME1Q06323 249 aa19.94■□□□□ 0.78
FAM3A-213ENST00000440318 LMOD2Q6P5Q4 547 aa19.94■□□□□ 0.78
FAM3A-213ENST00000440318 RGL3Q3MIN7 710 aa19.93■□□□□ 0.78
FAM3A-213ENST00000440318 ARHGEF10O15013 1369 aa19.93■□□□□ 0.78
FAM3A-213ENST00000440318 TNS1Q9HBL0 1735 aaKnown RBP19.93■□□□□ 0.78
FAM3A-213ENST00000440318 ANKRD30BQ9BXX2 1392 aa19.91■□□□□ 0.78
FAM3A-213ENST00000440318 DISP2A7MBM2 1401 aa19.91■□□□□ 0.78
FAM3A-213ENST00000440318 BTG4Q9NY30 223 aa19.9■□□□□ 0.78
FAM3A-213ENST00000440318 TRPM3Q9HCF6 1732 aaPredicted RBP19.88■□□□□ 0.77
FAM3A-213ENST00000440318 THSD7AQ9UPZ6 1657 aa19.88■□□□□ 0.77
FAM3A-213ENST00000440318 COL14A1Q05707 1796 aaKnown RBP19.88■□□□□ 0.77
FAM3A-213ENST00000440318 EZH2Q15910 746 aaKnown RBP19.87■□□□□ 0.77
FAM3A-213ENST00000440318 SIRT1Q96EB6 747 aa19.87■□□□□ 0.77
FAM3A-213ENST00000440318 SPATA31A5Q5VU36 1347 aa19.86■□□□□ 0.77
FAM3A-213ENST00000440318 SPATA31A7Q8IWB4 1347 aa19.86■□□□□ 0.77
FAM3A-213ENST00000440318 PMFBP1Q8TBY8 1022 aa19.86■□□□□ 0.77
FAM3A-213ENST00000440318 ALS2Q96Q42 1657 aa19.85■□□□□ 0.77
FAM3A-213ENST00000440318 SAFB2Q14151 953 aaKnown RBP eCLIP19.84■□□□□ 0.77
FAM3A-213ENST00000440318 ADGRB2O60241 1585 aa19.83■□□□□ 0.76
FAM3A-213ENST00000440318 CRYBG1Q9Y4K1 1723 aa19.82■□□□□ 0.76
FAM3A-213ENST00000440318 PRAM1Q96QH2 718 aa19.82■□□□□ 0.76
FAM3A-213ENST00000440318 CAMKK2Q96RR4 588 aa19.82■□□□□ 0.76
FAM3A-213ENST00000440318 C14orf93Q9H972 538 aaKnown RBP19.82■□□□□ 0.76
FAM3A-213ENST00000440318 ANKARQ7Z5J8 1434 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms