RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-213ENST00000439732 DLC1Q96QB1 1528 aa13.56□□□□□ -0.24
SMARCA2-213ENST00000439732 NBPF8Q3BBV2 869 aa13.55□□□□□ -0.24
SMARCA2-213ENST00000439732 ROCK2O75116 1388 aaKnown RBP13.54□□□□□ -0.24
SMARCA2-213ENST00000439732 SAFB2Q14151 953 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMARCA2-213ENST00000439732 CARD11Q9BXL7 1154 aa13.52□□□□□ -0.25
SMARCA2-213ENST00000439732 PLEKHH1Q9ULM0 1364 aa13.52□□□□□ -0.25
SMARCA2-213ENST00000439732 TRPM1Q7Z4N2 1603 aa13.51□□□□□ -0.25
SMARCA2-213ENST00000439732 NALCNQ8IZF0 1738 aa13.5□□□□□ -0.25
SMARCA2-213ENST00000439732 EIF3AQ14152 1382 aaKnown RBP13.5□□□□□ -0.25
SMARCA2-213ENST00000439732 GPRASP1Q5JY77 1395 aa13.5□□□□□ -0.25
SMARCA2-213ENST00000439732 CENPJQ9HC77 1338 aaPredicted RBP13.5□□□□□ -0.25
SMARCA2-213ENST00000439732 MINK1Q8N4C8 1332 aaPredicted RBP13.49□□□□□ -0.25
SMARCA2-213ENST00000439732 MST1RQ04912 1400 aa13.48□□□□□ -0.25
SMARCA2-213ENST00000439732 HSPA1LP34931 641 aa13.48□□□□□ -0.25
SMARCA2-213ENST00000439732 BRINP3Q76B58 766 aa13.48□□□□□ -0.25
SMARCA2-213ENST00000439732 CDC42BPGQ6DT37 1551 aa13.48□□□□□ -0.25
SMARCA2-213ENST00000439732 RALGAPBQ86X10 1494 aa13.48□□□□□ -0.25
SMARCA2-213ENST00000439732 WASLO00401 505 aaPredicted RBP13.47□□□□□ -0.25
SMARCA2-213ENST00000439732 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
SMARCA2-213ENST00000439732 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
SMARCA2-213ENST00000439732 HIRIP3Q9BW71 556 aaPredicted RBP13.47□□□□□ -0.25
SMARCA2-213ENST00000439732 C1orf167Q5SNV9 1468 aa13.47□□□□□ -0.25
SMARCA2-213ENST00000439732 ARHGEF28Q8N1W1 1705 aaKnown RBP13.47□□□□□ -0.25
SMARCA2-213ENST00000439732 ROBO1Q9Y6N7 1651 aa13.47□□□□□ -0.25
SMARCA2-213ENST00000439732 NUTM2FA1L443 756 aa13.45□□□□□ -0.26
SMARCA2-213ENST00000439732 ORAI2Q96SN7 254 aa13.45□□□□□ -0.26
SMARCA2-213ENST00000439732 CDK19Q9BWU1 502 aa13.44□□□□□ -0.26
SMARCA2-213ENST00000439732 ADGRB2O60241 1585 aa13.43□□□□□ -0.26
SMARCA2-213ENST00000439732 ANKARQ7Z5J8 1434 aa13.43□□□□□ -0.26
SMARCA2-213ENST00000439732 EVC2Q86UK5 1308 aa13.42□□□□□ -0.26
SMARCA2-213ENST00000439732 FMN2Q9NZ56 1722 aa13.42□□□□□ -0.26
SMARCA2-213ENST00000439732 PHF8Q9UPP1 1060 aa13.42□□□□□ -0.26
SMARCA2-213ENST00000439732 NPHP3Q7Z494 1330 aa13.41□□□□□ -0.26
SMARCA2-213ENST00000439732 SRPK2P78362 688 aaKnown RBP13.41□□□□□ -0.26
SMARCA2-213ENST00000439732 LRRC59Q96AG4 307 aaKnown RBP13.41□□□□□ -0.26
SMARCA2-213ENST00000439732 NUDT16Q96DE0 195 aaKnown RBP13.41□□□□□ -0.26
SMARCA2-213ENST00000439732 FOXO3O43524 673 aa13.4□□□□□ -0.26
SMARCA2-213ENST00000439732 CCDC61Q9Y6R9 512 aa13.4□□□□□ -0.26
SMARCA2-213ENST00000439732 AHDC1Q5TGY3 1603 aaPredicted RBP13.39□□□□□ -0.27
SMARCA2-213ENST00000439732 PHLPP1O60346 1717 aa13.39□□□□□ -0.27
SMARCA2-213ENST00000439732 ST20-MTHFSA0A0A6YYL1 179 aa13.39□□□□□ -0.27
SMARCA2-213ENST00000439732 PSME1Q06323 249 aa13.39□□□□□ -0.27
SMARCA2-213ENST00000439732 SBNO2Q9Y2G9 1366 aa13.39□□□□□ -0.27
SMARCA2-213ENST00000439732 TULP4Q9NRJ4 1543 aa13.39□□□□□ -0.27
SMARCA2-213ENST00000439732 QRICH2Q9H0J4 1663 aa13.38□□□□□ -0.27
SMARCA2-213ENST00000439732 SOS2Q07890 1332 aaPredicted RBP13.38□□□□□ -0.27
SMARCA2-213ENST00000439732 RGPD8O14715 1765 aaPredicted RBP13.37□□□□□ -0.27
SMARCA2-213ENST00000439732 USP47Q96K76 1375 aa13.37□□□□□ -0.27
SMARCA2-213ENST00000439732 JCADQ9P266 1359 aa13.37□□□□□ -0.27
SMARCA2-213ENST00000439732 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
SMARCA2-213ENST00000439732 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
SMARCA2-213ENST00000439732 PRR36Q9H6K5 1346 aa13.37□□□□□ -0.27
SMARCA2-213ENST00000439732 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
SMARCA2-213ENST00000439732 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
SMARCA2-213ENST00000439732 PMFBP1Q8TBY8 1022 aa13.36□□□□□ -0.27
SMARCA2-213ENST00000439732 DDX17Q92841 729 aaKnown RBP13.36□□□□□ -0.27
SMARCA2-213ENST00000439732 CABP2Q9NPB3 220 aa13.36□□□□□ -0.27
SMARCA2-213ENST00000439732 KIF1AQ12756 1690 aa13.36□□□□□ -0.27
SMARCA2-213ENST00000439732 NHSL1Q5SYE7 1610 aa13.35□□□□□ -0.27
SMARCA2-213ENST00000439732 EIF4G2P78344 907 aaKnown RBP eCLIP13.35□□□□□ -0.274e-7■■■■□ 19.9
SMARCA2-213ENST00000439732 ITSN1Q15811 1721 aa13.34□□□□□ -0.27
SMARCA2-213ENST00000439732 CDCA8Q53HL2 280 aa13.34□□□□□ -0.27
SMARCA2-213ENST00000439732 ATAD2Q6PL18 1390 aa13.33□□□□□ -0.27
SMARCA2-213ENST00000439732 COL16A1Q07092 1604 aaPredicted RBP13.33□□□□□ -0.28
SMARCA2-213ENST00000439732 USP32Q8NFA0 1604 aa13.33□□□□□ -0.28
SMARCA2-213ENST00000439732 TMF1P82094 1093 aa13.33□□□□□ -0.28
SMARCA2-213ENST00000439732 TESK2Q96S53 571 aa13.33□□□□□ -0.28
SMARCA2-213ENST00000439732 CABP1Q9NZU7 370 aa13.33□□□□□ -0.28
SMARCA2-213ENST00000439732 SPATA31A6Q5VVP1 1343 aa13.33□□□□□ -0.28
SMARCA2-213ENST00000439732 ATP7BP35670 1465 aa13.32□□□□□ -0.28
SMARCA2-213ENST00000439732 XPCQ01831 940 aaPredicted RBP13.32□□□□□ -0.28
SMARCA2-213ENST00000439732 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
SMARCA2-213ENST00000439732 ACEP12821 1306 aa13.31□□□□□ -0.28
SMARCA2-213ENST00000439732 SBNO1A3KN83 1393 aa13.31□□□□□ -0.28
SMARCA2-213ENST00000439732 PPIP5K1Q6PFW1 1433 aa13.3□□□□□ -0.28
SMARCA2-213ENST00000439732 PXDNQ92626 1479 aa13.3□□□□□ -0.28
SMARCA2-213ENST00000439732 SPATA31A3Q5VYP0 1347 aa13.3□□□□□ -0.28
SMARCA2-213ENST00000439732 POLR3AO14802 1390 aaPredicted RBP13.3□□□□□ -0.28
SMARCA2-213ENST00000439732 BRD4O60885 1362 aaPredicted RBP13.3□□□□□ -0.28
SMARCA2-213ENST00000439732 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
SMARCA2-213ENST00000439732 LMOD2Q6P5Q4 547 aa13.29□□□□□ -0.28
SMARCA2-213ENST00000439732 TMC1Q8TDI8 760 aa13.29□□□□□ -0.28
SMARCA2-213ENST00000439732 SHPRHQ149N8 1683 aa13.28□□□□□ -0.28
SMARCA2-213ENST00000439732 HSPA5P11021 654 aaKnown RBP13.28□□□□□ -0.28
SMARCA2-213ENST00000439732 TERF2IPQ9NYB0 399 aa13.28□□□□□ -0.28
SMARCA2-213ENST00000439732 ARHGEF10O15013 1369 aa13.28□□□□□ -0.28
SMARCA2-213ENST00000439732 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
SMARCA2-213ENST00000439732 NUTM2BA6NNL0 878 aaPredicted RBP13.27□□□□□ -0.29
SMARCA2-213ENST00000439732 NUTM2EB1AL46 878 aaPredicted RBP13.27□□□□□ -0.29
SMARCA2-213ENST00000439732 MEX3CQ5U5Q3 659 aaKnown RBP13.27□□□□□ -0.29
SMARCA2-213ENST00000439732 NUTM2AQ8IVF1 878 aaPredicted RBP13.27□□□□□ -0.29
SMARCA2-213ENST00000439732 ZEB1P37275 1124 aaPredicted RBP13.26□□□□□ -0.29
SMARCA2-213ENST00000439732 TNS3Q68CZ2 1445 aa13.26□□□□□ -0.29
SMARCA2-213ENST00000439732 HDGFL2Q7Z4V5 671 aaPredicted RBP13.26□□□□□ -0.29
SMARCA2-213ENST00000439732 TOPAZ1Q8N9V7 1692 aa13.26□□□□□ -0.29
SMARCA2-213ENST00000439732 NINLQ9Y2I6 1382 aa13.26□□□□□ -0.29
SMARCA2-213ENST00000439732 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
SMARCA2-213ENST00000439732 SLC12A5Q9H2X9 1139 aa13.25□□□□□ -0.29
SMARCA2-213ENST00000439732 HAP1P54257 671 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-213ENST00000439732 DISP3Q9P2K9 1392 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms