RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 DISP3Q9P2K9 1392 aa10.46□□□□□ -0.73
UBR3-205ENST00000439681 NWD1Q149M9 1564 aa10.46□□□□□ -0.74
UBR3-205ENST00000439681 KIF7Q2M1P5 1343 aa10.45□□□□□ -0.74
UBR3-205ENST00000439681 ARHGEF28Q8N1W1 1705 aaKnown RBP10.45□□□□□ -0.74
UBR3-205ENST00000439681 CHD2O14647 1828 aaKnown RBP10.45□□□□□ -0.74
UBR3-205ENST00000439681 KNDC1Q76NI1 1749 aa10.45□□□□□ -0.74
UBR3-205ENST00000439681 CCDC7Q96M83 1385 aa10.44□□□□□ -0.74
UBR3-205ENST00000439681 CDK19Q9BWU1 502 aa10.44□□□□□ -0.74
UBR3-205ENST00000439681 NKTRP30414 1462 aaKnown RBP10.44□□□□□ -0.74
UBR3-205ENST00000439681 EVC2Q86UK5 1308 aa10.44□□□□□ -0.74
UBR3-205ENST00000439681 WASLO00401 505 aaPredicted RBP10.43□□□□□ -0.74
UBR3-205ENST00000439681 TMEM94Q12767 1356 aa10.43□□□□□ -0.74
UBR3-205ENST00000439681 PUS7Q96PZ0 661 aaKnown RBP10.43□□□□□ -0.74
UBR3-205ENST00000439681 CABP2Q9NPB3 220 aa10.43□□□□□ -0.74
UBR3-205ENST00000439681 TULP4Q9NRJ4 1543 aa10.42□□□□□ -0.74
UBR3-205ENST00000439681 CDCA8Q53HL2 280 aa10.42□□□□□ -0.74
UBR3-205ENST00000439681 NCOA3Q9Y6Q9 1424 aa10.42□□□□□ -0.74
UBR3-205ENST00000439681 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.42□□□□□ -0.74
UBR3-205ENST00000439681 STRCP1A6NGW2 1772 aa10.41□□□□□ -0.74
UBR3-205ENST00000439681 LRRC7Q96NW7 1537 aa10.41□□□□□ -0.74
UBR3-205ENST00000439681 QRICH2Q9H0J4 1663 aa10.41□□□□□ -0.74
UBR3-205ENST00000439681 SRPK2P78362 688 aaKnown RBP10.41□□□□□ -0.74
UBR3-205ENST00000439681 POLR3GLQ9BT43 218 aa10.41□□□□□ -0.74
UBR3-205ENST00000439681 C19orf44Q9H6X5 657 aa10.41□□□□□ -0.74
UBR3-205ENST00000439681 ADGRL3Q9HAR2 1447 aa10.4□□□□□ -0.74
UBR3-205ENST00000439681 C14orf37Q86TY3 774 aa10.39□□□□□ -0.75
UBR3-205ENST00000439681 PRR36Q9H6K5 1346 aa10.39□□□□□ -0.75
UBR3-205ENST00000439681 DDX10Q13206 875 aaKnown RBP10.39□□□□□ -0.75
UBR3-205ENST00000439681 NUDT16Q96DE0 195 aaKnown RBP10.39□□□□□ -0.75
UBR3-205ENST00000439681 LTBP4Q8N2S1 1624 aa10.39□□□□□ -0.75
UBR3-205ENST00000439681 ADGRB2O60241 1585 aa10.38□□□□□ -0.75
UBR3-205ENST00000439681 NUTM2FA1L443 756 aa10.38□□□□□ -0.75
UBR3-205ENST00000439681 SLC12A5Q9H2X9 1139 aa10.38□□□□□ -0.75
UBR3-205ENST00000439681 CCDC61Q9Y6R9 512 aa10.37□□□□□ -0.75
UBR3-205ENST00000439681 ATAD2Q6PL18 1390 aa10.37□□□□□ -0.75
UBR3-205ENST00000439681 CABP1Q9NZU7 370 aa10.36□□□□□ -0.75
UBR3-205ENST00000439681 TMC1Q8TDI8 760 aa10.36□□□□□ -0.75
UBR3-205ENST00000439681 ATF3P18847 181 aa10.35□□□□□ -0.75
UBR3-205ENST00000439681 PANK3Q9H999 370 aa10.35□□□□□ -0.75
UBR3-205ENST00000439681 MSH6P52701 1360 aa10.35□□□□□ -0.75
UBR3-205ENST00000439681 ATP7BP35670 1465 aa10.35□□□□□ -0.75
UBR3-205ENST00000439681 PLEKHG3A1L390 1219 aa10.35□□□□□ -0.75
UBR3-205ENST00000439681 CADPS2Q86UW7 1296 aa10.35□□□□□ -0.75
UBR3-205ENST00000439681 CDC42BPGQ6DT37 1551 aa10.35□□□□□ -0.75
UBR3-205ENST00000439681 DCCP43146 1447 aa10.34□□□□□ -0.75
UBR3-205ENST00000439681 ANKARQ7Z5J8 1434 aa10.34□□□□□ -0.75
UBR3-205ENST00000439681 NALCNQ8IZF0 1738 aa10.34□□□□□ -0.75
UBR3-205ENST00000439681 CARD14Q9BXL6 1004 aa10.34□□□□□ -0.75
UBR3-205ENST00000439681 PER1O15534 1290 aaPredicted RBP10.33□□□□□ -0.76
UBR3-205ENST00000439681 ORAI2Q96SN7 254 aa10.33□□□□□ -0.76
UBR3-205ENST00000439681 NINLQ9Y2I6 1382 aa10.33□□□□□ -0.76
UBR3-205ENST00000439681 PPIP5K1Q6PFW1 1433 aa10.33□□□□□ -0.76
UBR3-205ENST00000439681 SLAIN2Q9P270 581 aa10.32□□□□□ -0.76
UBR3-205ENST00000439681 MST1RQ04912 1400 aa10.32□□□□□ -0.76
UBR3-205ENST00000439681 C1orf167Q5SNV9 1468 aa10.32□□□□□ -0.76
UBR3-205ENST00000439681 ESCO1Q5FWF5 840 aa10.32□□□□□ -0.76
UBR3-205ENST00000439681 PMFBP1Q8TBY8 1022 aa10.32□□□□□ -0.76
UBR3-205ENST00000439681 CD163L1Q9NR16 1453 aa10.32□□□□□ -0.76
UBR3-205ENST00000439681 USP32Q8NFA0 1604 aa10.31□□□□□ -0.76
UBR3-205ENST00000439681 PHF8Q9UPP1 1060 aa10.31□□□□□ -0.76
UBR3-205ENST00000439681 XIRP1Q702N8 1843 aaKnown RBP10.31□□□□□ -0.76
UBR3-205ENST00000439681 CPSF1Q10570 1443 aaKnown RBP10.31□□□□□ -0.76
UBR3-205ENST00000439681 ANKRD36BQ8N2N9 1353 aa10.31□□□□□ -0.76
UBR3-205ENST00000439681 ACEP12821 1306 aa10.31□□□□□ -0.76
UBR3-205ENST00000439681 TERF2IPQ9NYB0 399 aa10.31□□□□□ -0.76
UBR3-205ENST00000439681 FMN2Q9NZ56 1722 aa10.3□□□□□ -0.76
UBR3-205ENST00000439681 A0A1W2PP64 1363 aa10.3□□□□□ -0.76
UBR3-205ENST00000439681 DIEXFQ68CQ4 756 aaKnown RBP10.3□□□□□ -0.76
UBR3-205ENST00000439681 POLR3AO14802 1390 aaPredicted RBP10.3□□□□□ -0.76
UBR3-205ENST00000439681 HDGFL2Q7Z4V5 671 aaPredicted RBP10.29□□□□□ -0.76
UBR3-205ENST00000439681 CERKQ8TCT0 537 aa10.29□□□□□ -0.76
UBR3-205ENST00000439681 ZNF692Q9BU19 519 aaPredicted RBP10.29□□□□□ -0.76
UBR3-205ENST00000439681 MYOM1P52179 1685 aa10.29□□□□□ -0.76
UBR3-205ENST00000439681 BRINP3Q76B58 766 aa10.28□□□□□ -0.76
UBR3-205ENST00000439681 NGDNQ8NEJ9 315 aaKnown RBP10.28□□□□□ -0.76
UBR3-205ENST00000439681 FOXO3O43524 673 aa10.28□□□□□ -0.76
UBR3-205ENST00000439681 AMER1Q5JTC6 1135 aaPredicted RBP10.28□□□□□ -0.76
UBR3-205ENST00000439681 KTN1Q86UP2 1357 aaKnown RBP10.27□□□□□ -0.76
UBR3-205ENST00000439681 KNSTRNQ9Y448 316 aa10.27□□□□□ -0.77
UBR3-205ENST00000439681 SSH2Q76I76 1423 aa10.26□□□□□ -0.77
UBR3-205ENST00000439681 NSD3Q9BZ95 1437 aa10.26□□□□□ -0.77
UBR3-205ENST00000439681 TOPAZ1Q8N9V7 1692 aa10.26□□□□□ -0.77
UBR3-205ENST00000439681 DDX17Q92841 729 aaKnown RBP10.26□□□□□ -0.77
UBR3-205ENST00000439681 USP6P35125 1406 aa10.25□□□□□ -0.77
UBR3-205ENST00000439681 TOM1O60784 492 aa10.25□□□□□ -0.77
UBR3-205ENST00000439681 PSME1Q06323 249 aa10.25□□□□□ -0.77
UBR3-205ENST00000439681 IQSEC2Q5JU85 1478 aa10.25□□□□□ -0.77
UBR3-205ENST00000439681 TTC21BQ7Z4L5 1316 aa10.25□□□□□ -0.77
UBR3-205ENST00000439681 FYB1O15117 783 aa10.25□□□□□ -0.77
UBR3-205ENST00000439681 KRT28Q7Z3Y7 464 aa10.25□□□□□ -0.77
UBR3-205ENST00000439681 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.25□□□□□ -0.77
UBR3-205ENST00000439681 EDC4Q6P2E9 1401 aaKnown RBP10.24□□□□□ -0.77
UBR3-205ENST00000439681 UBAP1LF5GYI3 381 aa10.24□□□□□ -0.77
UBR3-205ENST00000439681 XPCQ01831 940 aaPredicted RBP10.24□□□□□ -0.77
UBR3-205ENST00000439681 NPC1L1Q9UHC9 1359 aa10.24□□□□□ -0.77
UBR3-205ENST00000439681 CC2D1BQ5T0F9 858 aaKnown RBP10.24□□□□□ -0.77
UBR3-205ENST00000439681 CGNL1Q0VF96 1302 aa10.23□□□□□ -0.77
UBR3-205ENST00000439681 CNGB1Q14028 1251 aaPredicted RBP10.23□□□□□ -0.77
UBR3-205ENST00000439681 NME9Q86XW9 330 aa10.23□□□□□ -0.77
UBR3-205ENST00000439681 ZRANB1Q9UGI0 708 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms