RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 ORAI2Q96SN7 254 aa27.56■■■□□ 2
CCDC78-204ENST00000439619 WAPLQ7Z5K2 1190 aa27.55■■■□□ 2
CCDC78-204ENST00000439619 DDX17Q92841 729 aaKnown RBP27.55■■■□□ 2
CCDC78-204ENST00000439619 DHX57Q6P158 1386 aaKnown RBP27.55■■■□□ 2
CCDC78-204ENST00000439619 YTHDC2Q9H6S0 1430 aaKnown RBP27.55■■■□□ 2
CCDC78-204ENST00000439619 LRP6O75581 1613 aa27.55■■■□□ 2
CCDC78-204ENST00000439619 CDC42BPGQ6DT37 1551 aa27.53■■■□□ 2
CCDC78-204ENST00000439619 ESCO1Q5FWF5 840 aa27.53■■■□□ 2
CCDC78-204ENST00000439619 SIRT1Q96EB6 747 aa27.53■■■□□ 2
CCDC78-204ENST00000439619 STAC3Q96MF2 364 aa27.52■■■□□ 2
CCDC78-204ENST00000439619 NRXN1Q9ULB1 1477 aa27.51■■■□□ 2
CCDC78-204ENST00000439619 CFAP70Q5T0N1 1121 aa27.51■■□□□ 1.99
CCDC78-204ENST00000439619 NPHP3Q7Z494 1330 aa27.5■■□□□ 1.99
CCDC78-204ENST00000439619 PNPLA6Q8IY17 1366 aa27.49■■□□□ 1.99
CCDC78-204ENST00000439619 LAMC1P11047 1609 aa27.49■■□□□ 1.99
CCDC78-204ENST00000439619 SOS2Q07890 1332 aaPredicted RBP27.49■■□□□ 1.99
CCDC78-204ENST00000439619 KNDC1Q76NI1 1749 aa27.47■■□□□ 1.99
CCDC78-204ENST00000439619 DCAF11Q8TEB1 546 aa27.46■■□□□ 1.99
CCDC78-204ENST00000439619 PLEKHH1Q9ULM0 1364 aa27.46■■□□□ 1.99
CCDC78-204ENST00000439619 KDM2AQ9Y2K7 1162 aa27.45■■□□□ 1.98
CCDC78-204ENST00000439619 NUTM2FA1L443 756 aa27.44■■□□□ 1.98
CCDC78-204ENST00000439619 POGKQ9P215 609 aa27.44■■□□□ 1.98
CCDC78-204ENST00000439619 C8orf37Q96NL8 207 aa27.42■■□□□ 1.98
CCDC78-204ENST00000439619 AFF2P51816 1311 aa27.41■■□□□ 1.98
CCDC78-204ENST00000439619 FOXO3O43524 673 aa27.41■■□□□ 1.98
CCDC78-204ENST00000439619 PRAM1Q96QH2 718 aa27.41■■□□□ 1.98
CCDC78-204ENST00000439619 RXRBP28702 533 aa27.4■■□□□ 1.98
CCDC78-204ENST00000439619 ADAMTS2O95450 1211 aa27.38■■□□□ 1.97
CCDC78-204ENST00000439619 NGLY1Q96IV0 654 aa27.38■■□□□ 1.97
CCDC78-204ENST00000439619 SAFB2Q14151 953 aaKnown RBP eCLIP27.37■■□□□ 1.97
CCDC78-204ENST00000439619 DLC1Q96QB1 1528 aa27.35■■□□□ 1.97
CCDC78-204ENST00000439619 XPCQ01831 940 aaPredicted RBP27.34■■□□□ 1.97
CCDC78-204ENST00000439619 TRAK1Q9UPV9 953 aa27.34■■□□□ 1.97
CCDC78-204ENST00000439619 PXDNQ92626 1479 aa27.32■■□□□ 1.96
CCDC78-204ENST00000439619 FMN2Q9NZ56 1722 aa27.31■■□□□ 1.96
CCDC78-204ENST00000439619 PSME1Q06323 249 aa27.31■■□□□ 1.96
CCDC78-204ENST00000439619 PHF8Q9UPP1 1060 aa27.31■■□□□ 1.96
CCDC78-204ENST00000439619 QTRT2Q9H974 415 aaKnown RBP27.3■■□□□ 1.96
CCDC78-204ENST00000439619 ADGRB1O14514 1584 aa27.3■■□□□ 1.96
CCDC78-204ENST00000439619 EIF3AQ14152 1382 aaKnown RBP27.29■■□□□ 1.96
CCDC78-204ENST00000439619 KIF1AQ12756 1690 aa27.29■■□□□ 1.96
CCDC78-204ENST00000439619 KRT28Q7Z3Y7 464 aa27.28■■□□□ 1.96
CCDC78-204ENST00000439619 RBM6P78332 1123 aaKnown RBP27.27■■□□□ 1.96
CCDC78-204ENST00000439619 CDK12Q9NYV4 1490 aaPredicted RBP27.26■■□□□ 1.95
CCDC78-204ENST00000439619 USP21Q9UK80 565 aa27.26■■□□□ 1.95
CCDC78-204ENST00000439619 COL22A1Q8NFW1 1626 aaPredicted RBP27.26■■□□□ 1.95
CCDC78-204ENST00000439619 ANKARQ7Z5J8 1434 aa27.25■■□□□ 1.95
CCDC78-204ENST00000439619 SPATA31A3Q5VYP0 1347 aa27.25■■□□□ 1.95
CCDC78-204ENST00000439619 MINK1Q8N4C8 1332 aaPredicted RBP27.23■■□□□ 1.95
CCDC78-204ENST00000439619 HIRIP3Q9BW71 556 aaPredicted RBP27.23■■□□□ 1.95
CCDC78-204ENST00000439619 HAP1P54257 671 aaPredicted RBP27.22■■□□□ 1.95
CCDC78-204ENST00000439619 FNBP4Q8N3X1 1017 aaPredicted RBP27.22■■□□□ 1.95
CCDC78-204ENST00000439619 TRPC5Q9UL62 973 aaPredicted RBP27.22■■□□□ 1.95
CCDC78-204ENST00000439619 ADGRB2O60241 1585 aa27.21■■□□□ 1.95
CCDC78-204ENST00000439619 WASLO00401 505 aaPredicted RBP27.19■■□□□ 1.94
CCDC78-204ENST00000439619 LMOD2Q6P5Q4 547 aa27.18■■□□□ 1.94
CCDC78-204ENST00000439619 PMFBP1Q8TBY8 1022 aa27.18■■□□□ 1.94
CCDC78-204ENST00000439619 TNS3Q68CZ2 1445 aa27.17■■□□□ 1.94
CCDC78-204ENST00000439619 SBNO1A3KN83 1393 aa27.17■■□□□ 1.94
CCDC78-204ENST00000439619 ARHGEF10O15013 1369 aa27.16■■□□□ 1.94
CCDC78-204ENST00000439619 GPRASP1Q5JY77 1395 aa27.16■■□□□ 1.94
CCDC78-204ENST00000439619 TULP4Q9NRJ4 1543 aa27.12■■□□□ 1.93
CCDC78-204ENST00000439619 NGDNQ8NEJ9 315 aaKnown RBP27.11■■□□□ 1.93
CCDC78-204ENST00000439619 UPF1Q92900 1129 aaKnown RBP eCLIP27.11■■□□□ 1.93
CCDC78-204ENST00000439619 RGS12O14924 1447 aa27.1■■□□□ 1.93
CCDC78-204ENST00000439619 ATRNO75882 1429 aa27.08■■□□□ 1.93
CCDC78-204ENST00000439619 RGPD8O14715 1765 aaPredicted RBP27.08■■□□□ 1.93
CCDC78-204ENST00000439619 PLEKHG5O94827 1062 aa27.08■■□□□ 1.93
CCDC78-204ENST00000439619 PRR36Q9H6K5 1346 aa27.08■■□□□ 1.93
CCDC78-204ENST00000439619 KIAA1210Q9ULL0 1709 aa27.07■■□□□ 1.92
CCDC78-204ENST00000439619 USP32Q8NFA0 1604 aa27.07■■□□□ 1.92
CCDC78-204ENST00000439619 UNC5CLQ8IV45 518 aa27.06■■□□□ 1.92
CCDC78-204ENST00000439619 BCL9LQ86UU0 1499 aa27.06■■□□□ 1.92
CCDC78-204ENST00000439619 NBPF1Q3BBV0 1214 aa27.05■■□□□ 1.92
CCDC78-204ENST00000439619 CABLES1Q8TDN4 633 aa27.05■■□□□ 1.92
CCDC78-204ENST00000439619 NUDT16Q96DE0 195 aaKnown RBP27.05■■□□□ 1.92
CCDC78-204ENST00000439619 CDK19Q9BWU1 502 aa27.05■■□□□ 1.92
CCDC78-204ENST00000439619 ARHGEF28Q8N1W1 1705 aaKnown RBP27.04■■□□□ 1.92
CCDC78-204ENST00000439619 L3MBTL2Q969R5 705 aa27.04■■□□□ 1.92
CCDC78-204ENST00000439619 GJD4Q96KN9 370 aaPredicted RBP27.04■■□□□ 1.92
CCDC78-204ENST00000439619 PAK3O75914 559 aaPredicted RBP27.03■■□□□ 1.92
CCDC78-204ENST00000439619 NEUROD1Q13562 356 aa27.03■■□□□ 1.92
CCDC78-204ENST00000439619 MARF1Q9Y4F3 1742 aaKnown RBP27.03■■□□□ 1.92
CCDC78-204ENST00000439619 ATAD2Q6PL18 1390 aa27.01■■□□□ 1.91
CCDC78-204ENST00000439619 SLIT2O94813 1529 aa27■■□□□ 1.91
CCDC78-204ENST00000439619 CENPJQ9HC77 1338 aaPredicted RBP27■■□□□ 1.91
CCDC78-204ENST00000439619 SIN3AQ96ST3 1273 aa27■■□□□ 1.91
CCDC78-204ENST00000439619 CCDC61Q9Y6R9 512 aa27■■□□□ 1.91
CCDC78-204ENST00000439619 ATP7BP35670 1465 aa26.99■■□□□ 1.91
CCDC78-204ENST00000439619 SRPK2P78362 688 aaKnown RBP26.97■■□□□ 1.91
CCDC78-204ENST00000439619 CCDC9Q9Y3X0 531 aaKnown RBP26.96■■□□□ 1.91
CCDC78-204ENST00000439619 ITSN1Q15811 1721 aa26.95■■□□□ 1.9
CCDC78-204ENST00000439619 VPS72Q15906 364 aa26.93■■□□□ 1.9
CCDC78-204ENST00000439619 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.93■■□□□ 1.9
CCDC78-204ENST00000439619 TRPM3Q9HCF6 1732 aaPredicted RBP26.92■■□□□ 1.9
CCDC78-204ENST00000439619 RALGAPBQ86X10 1494 aa26.92■■□□□ 1.9
CCDC78-204ENST00000439619 ACEP12821 1306 aa26.91■■□□□ 1.9
CCDC78-204ENST00000439619 PLEKHG3A1L390 1219 aa26.91■■□□□ 1.9
CCDC78-204ENST00000439619 FAM83GA6ND36 823 aa26.91■■□□□ 1.9
CCDC78-204ENST00000439619 POLR3AO14802 1390 aaPredicted RBP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms