RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 STK31Q9BXU1 1019 aa7.82□□□□□ -1.16
BDNF-211ENST00000439476 STK26Q9P289 416 aa7.82□□□□□ -1.16
BDNF-211ENST00000439476 ZNF622Q969S3 477 aaKnown RBP eCLIP7.82□□□□□ -1.16
BDNF-211ENST00000439476 DDX49Q9Y6V7 483 aaKnown RBP7.82□□□□□ -1.16
BDNF-211ENST00000439476 ST18O60284 1047 aa7.82□□□□□ -1.16
BDNF-211ENST00000439476 RUNDC1Q96C34 613 aa7.82□□□□□ -1.16
BDNF-211ENST00000439476 MRE11P49959 708 aa7.81□□□□□ -1.16
BDNF-211ENST00000439476 ATP6V1DQ9Y5K8 247 aa7.81□□□□□ -1.16
BDNF-211ENST00000439476 TRAK2O60296 914 aa7.81□□□□□ -1.16
BDNF-211ENST00000439476 GGT6Q6P531 493 aa7.81□□□□□ -1.16
BDNF-211ENST00000439476 DDX19BQ9UMR2 479 aa7.81□□□□□ -1.16
BDNF-211ENST00000439476 PDZRN3Q9UPQ7 1066 aa7.81□□□□□ -1.16
BDNF-211ENST00000439476 TROQ12816 1431 aaPredicted RBP7.81□□□□□ -1.16
BDNF-211ENST00000439476 ANKRD45Q5TZF3 282 aa7.81□□□□□ -1.16
BDNF-211ENST00000439476 C9orf84Q5VXU9 1444 aa7.81□□□□□ -1.16
BDNF-211ENST00000439476 CWC22Q9HCG8 908 aaKnown RBP7.81□□□□□ -1.16
BDNF-211ENST00000439476 IFT140Q96RY7 1462 aa7.8□□□□□ -1.16
BDNF-211ENST00000439476 SLFN5Q08AF3 891 aa7.8□□□□□ -1.16
BDNF-211ENST00000439476 GNL2Q13823 731 aaKnown RBP7.8□□□□□ -1.16
BDNF-211ENST00000439476 CUL7Q14999 1698 aa7.8□□□□□ -1.16
BDNF-211ENST00000439476 FAM13BQ9NYF5 915 aa7.8□□□□□ -1.16
BDNF-211ENST00000439476 ERBINQ96RT1 1412 aa7.8□□□□□ -1.16
BDNF-211ENST00000439476 CFAP43Q8NDM7 1665 aa7.79□□□□□ -1.16
BDNF-211ENST00000439476 A0A0G2JS52 829 aa7.79□□□□□ -1.16
BDNF-211ENST00000439476 TCP11L2Q8N4U5 519 aa7.79□□□□□ -1.16
BDNF-211ENST00000439476 PTPRGP23470 1445 aa7.79□□□□□ -1.16
BDNF-211ENST00000439476 MPNDQ8N594 471 aa7.79□□□□□ -1.16
BDNF-211ENST00000439476 LNPKQ9C0E8 428 aa7.78□□□□□ -1.16
BDNF-211ENST00000439476 GRIN2BQ13224 1484 aa7.78□□□□□ -1.16
BDNF-211ENST00000439476 RNF123Q5XPI4 1314 aa7.78□□□□□ -1.16
BDNF-211ENST00000439476 DUSP27Q5VZP5 1158 aa7.78□□□□□ -1.16
BDNF-211ENST00000439476 SMAP1Q8IYB5 467 aaPredicted RBP7.78□□□□□ -1.16
BDNF-211ENST00000439476 DHX29Q7Z478 1369 aaKnown RBP7.78□□□□□ -1.16
BDNF-211ENST00000439476 UGGT2Q9NYU1 1516 aa7.77□□□□□ -1.17
BDNF-211ENST00000439476 ELL2O00472 640 aaPredicted RBP7.77□□□□□ -1.17
BDNF-211ENST00000439476 MCM4P33991 863 aa7.77□□□□□ -1.17
BDNF-211ENST00000439476 TPM2P07951 284 aa7.77□□□□□ -1.17
BDNF-211ENST00000439476 AXDND1Q5T1B0 1012 aaPredicted RBP7.77□□□□□ -1.17
BDNF-211ENST00000439476 NUTM2DQ5VT03 806 aaPredicted RBP7.77□□□□□ -1.17
BDNF-211ENST00000439476 PLEKHH2Q8IVE3 1493 aa7.76□□□□□ -1.17
BDNF-211ENST00000439476 GOLGA6L1Q8N7Z2 621 aa7.76□□□□□ -1.17
BDNF-211ENST00000439476 WDR62O43379 1518 aa7.76□□□□□ -1.17
BDNF-211ENST00000439476 FOXD4L5Q5VV16 416 aaPredicted RBP7.76□□□□□ -1.17
BDNF-211ENST00000439476 GPATCH11Q8N954 259 aa7.76□□□□□ -1.17
BDNF-211ENST00000439476 FOXD4L4Q8WXT5 416 aaPredicted RBP7.76□□□□□ -1.17
BDNF-211ENST00000439476 NINLQ9Y2I6 1382 aa7.76□□□□□ -1.17
BDNF-211ENST00000439476 MTHFSP49914 203 aa7.76□□□□□ -1.17
BDNF-211ENST00000439476 LRRFIP1Q32MZ4 808 aaKnown RBP7.76□□□□□ -1.17
BDNF-211ENST00000439476 GRIPAP1Q4V328 841 aa7.76□□□□□ -1.17
BDNF-211ENST00000439476 CAMSAP2Q08AD1 1489 aa7.76□□□□□ -1.17
BDNF-211ENST00000439476 NPHP1O15259 732 aa7.75□□□□□ -1.17
BDNF-211ENST00000439476 SLC52A1Q9NWF4 448 aa7.75□□□□□ -1.17
BDNF-211ENST00000439476 KIF16BQ96L93 1317 aa7.75□□□□□ -1.17
BDNF-211ENST00000439476 CFAP70Q5T0N1 1121 aa7.75□□□□□ -1.17
BDNF-211ENST00000439476 ZBTB9Q96C00 473 aa7.75□□□□□ -1.17
BDNF-211ENST00000439476 RIPK4P57078 832 aa7.75□□□□□ -1.17
BDNF-211ENST00000439476 ANAPC15P60006 121 aa7.75□□□□□ -1.17
BDNF-211ENST00000439476 PRDM16Q9HAZ2 1276 aa7.75□□□□□ -1.17
BDNF-211ENST00000439476 EVC2Q86UK5 1308 aa7.75□□□□□ -1.17
BDNF-211ENST00000439476 IQGAP2Q13576 1575 aa7.75□□□□□ -1.17
BDNF-211ENST00000439476 CGNQ9P2M7 1197 aaKnown RBP7.75□□□□□ -1.17
BDNF-211ENST00000439476 SNAPC4Q5SXM2 1469 aa7.75□□□□□ -1.17
BDNF-211ENST00000439476 LMOD2Q6P5Q4 547 aa7.74□□□□□ -1.17
BDNF-211ENST00000439476 NOL8Q76FK4 1167 aaKnown RBP7.74□□□□□ -1.17
BDNF-211ENST00000439476 ZBTB22O15209 634 aa7.74□□□□□ -1.17
BDNF-211ENST00000439476 GRPEL1Q9HAV7 217 aa7.74□□□□□ -1.17
BDNF-211ENST00000439476 REC8O95072 547 aa7.74□□□□□ -1.17
BDNF-211ENST00000439476 NASPP49321 788 aaPredicted RBP7.74□□□□□ -1.17
BDNF-211ENST00000439476 THOC2Q8NI27 1593 aaKnown RBP7.73□□□□□ -1.17
BDNF-211ENST00000439476 C8orf34Q49A92 452 aa7.73□□□□□ -1.17
BDNF-211ENST00000439476 EXOSC9Q06265 439 aaKnown RBP7.73□□□□□ -1.17
BDNF-211ENST00000439476 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.73□□□□□ -1.17
BDNF-211ENST00000439476 LRPPRCP42704 1394 aaKnown RBP7.73□□□□□ -1.17
BDNF-211ENST00000439476 ISY1Q9ULR0 285 aaKnown RBP7.73□□□□□ -1.17
BDNF-211ENST00000439476 PARD3Q8TEW0 1356 aa7.73□□□□□ -1.17
BDNF-211ENST00000439476 TCOF1Q13428 1488 aaKnown RBP7.73□□□□□ -1.17
BDNF-211ENST00000439476 ZNF608Q9ULD9 1512 aaPredicted RBP7.73□□□□□ -1.17
BDNF-211ENST00000439476 IGHDP01880 384 aa7.73□□□□□ -1.17
BDNF-211ENST00000439476 NUCB2P80303 420 aa7.73□□□□□ -1.17
BDNF-211ENST00000439476 MVPQ14764 893 aaKnown RBP7.73□□□□□ -1.17
BDNF-211ENST00000439476 MCTP1Q6DN14 999 aa7.73□□□□□ -1.17
BDNF-211ENST00000439476 WDR63Q8IWG1 891 aa7.73□□□□□ -1.17
BDNF-211ENST00000439476 RUFY2Q8WXA3 655 aa7.73□□□□□ -1.17
BDNF-211ENST00000439476 MAP7D2Q96T17 732 aa7.73□□□□□ -1.17
BDNF-211ENST00000439476 TBC1D2Q9BYX2 928 aa7.73□□□□□ -1.17
BDNF-211ENST00000439476 NKTRP30414 1462 aaKnown RBP7.73□□□□□ -1.17
BDNF-211ENST00000439476 RALGAPBQ86X10 1494 aa7.73□□□□□ -1.17
BDNF-211ENST00000439476 ESPNB1AK53 854 aa7.72□□□□□ -1.17
BDNF-211ENST00000439476 TRIM6-TRIM34B2RNG4 842 aa7.72□□□□□ -1.17
BDNF-211ENST00000439476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.72□□□□□ -1.17
BDNF-211ENST00000439476 DIAPH1O60610 1272 aaKnown RBP7.72□□□□□ -1.17
BDNF-211ENST00000439476 TPM3P06753 285 aa7.72□□□□□ -1.17
BDNF-211ENST00000439476 TSR2Q969E8 191 aaKnown RBP7.72□□□□□ -1.17
BDNF-211ENST00000439476 VGFO15240 615 aaPredicted RBP7.72□□□□□ -1.17
BDNF-211ENST00000439476 GPS2Q13227 327 aa7.72□□□□□ -1.17
BDNF-211ENST00000439476 SLC4A10Q6U841 1118 aa7.72□□□□□ -1.17
BDNF-211ENST00000439476 API5Q9BZZ5 524 aaKnown RBP7.72□□□□□ -1.17
BDNF-211ENST00000439476 DISP3Q9P2K9 1392 aa7.72□□□□□ -1.17
BDNF-211ENST00000439476 SLC12A5Q9H2X9 1139 aa7.71□□□□□ -1.17
BDNF-211ENST00000439476 KIAA0586Q9BVV6 1533 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms