RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 ERVK-7P63135 1459 aa11.23□□□□□ -0.61
HCG20-208ENST00000439406 TIAM1Q13009 1591 aa11.22□□□□□ -0.61
HCG20-208ENST00000439406 NCOA2Q15596 1464 aa11.22□□□□□ -0.61
HCG20-208ENST00000439406 SPATA31A6Q5VVP1 1343 aa11.22□□□□□ -0.61
HCG20-208ENST00000439406 LRRC9Q6ZRR7 1453 aa11.22□□□□□ -0.61
HCG20-208ENST00000439406 UBR1Q8IWV7 1749 aa11.21□□□□□ -0.61
HCG20-208ENST00000439406 A6NJR5 290 aa11.21□□□□□ -0.61
HCG20-208ENST00000439406 TRIM66O15016 1216 aa11.21□□□□□ -0.61
HCG20-208ENST00000439406 TRAK2O60296 914 aa11.21□□□□□ -0.61
HCG20-208ENST00000439406 ABCC3O15438 1527 aa11.2□□□□□ -0.62
HCG20-208ENST00000439406 TMEM2Q9UHN6 1383 aa11.2□□□□□ -0.62
HCG20-208ENST00000439406 RXRBP28702 533 aa11.2□□□□□ -0.62
HCG20-208ENST00000439406 AEBP1Q8IUX7 1158 aa11.2□□□□□ -0.62
HCG20-208ENST00000439406 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
HCG20-208ENST00000439406 ARHGAP31Q2M1Z3 1444 aa11.19□□□□□ -0.62
HCG20-208ENST00000439406 MSH6P52701 1360 aa11.19□□□□□ -0.62
HCG20-208ENST00000439406 GPIHBP1Q8IV16 184 aa11.19□□□□□ -0.62
HCG20-208ENST00000439406 RGS22Q8NE09 1264 aa11.19□□□□□ -0.62
HCG20-208ENST00000439406 CFAP65Q6ZU64 1925 aaKnown RBP11.19□□□□□ -0.62
HCG20-208ENST00000439406 IGSF3O75054 1194 aa11.18□□□□□ -0.62
HCG20-208ENST00000439406 HMGB1P09429 215 aaKnown RBP11.18□□□□□ -0.62
HCG20-208ENST00000439406 TMCO4Q5TGY1 634 aa11.18□□□□□ -0.62
HCG20-208ENST00000439406 MEX3CQ5U5Q3 659 aaKnown RBP11.18□□□□□ -0.62
HCG20-208ENST00000439406 TRIM52Q96A61 297 aa11.18□□□□□ -0.62
HCG20-208ENST00000439406 EHBP1L1Q8N3D4 1523 aa11.18□□□□□ -0.62
HCG20-208ENST00000439406 CAMSAP2Q08AD1 1489 aa11.18□□□□□ -0.62
HCG20-208ENST00000439406 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
HCG20-208ENST00000439406 ARHGEF5Q12774 1597 aa11.17□□□□□ -0.62
HCG20-208ENST00000439406 SLC26A8Q96RN1 970 aa11.17□□□□□ -0.62
HCG20-208ENST00000439406 PRDM15P57071 1507 aaPredicted RBP11.16□□□□□ -0.62
HCG20-208ENST00000439406 SETD1AO15047 1707 aaKnown RBP11.16□□□□□ -0.62
HCG20-208ENST00000439406 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
HCG20-208ENST00000439406 FAM117AQ9C073 453 aa11.16□□□□□ -0.62
HCG20-208ENST00000439406 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.62
HCG20-208ENST00000439406 IDI1Q13907 227 aa11.15□□□□□ -0.62
HCG20-208ENST00000439406 MTMR7Q9Y216 660 aa11.15□□□□□ -0.62
HCG20-208ENST00000439406 EIF2AK4Q9P2K8 1649 aaKnown RBP11.15□□□□□ -0.62
HCG20-208ENST00000439406 NCOA3Q9Y6Q9 1424 aa11.15□□□□□ -0.62
HCG20-208ENST00000439406 PHLPP1O60346 1717 aa11.15□□□□□ -0.63
HCG20-208ENST00000439406 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
HCG20-208ENST00000439406 TET3O43151 1660 aa11.14□□□□□ -0.63
HCG20-208ENST00000439406 NKTRP30414 1462 aaKnown RBP11.14□□□□□ -0.63
HCG20-208ENST00000439406 CDK12Q9NYV4 1490 aaPredicted RBP11.14□□□□□ -0.63
HCG20-208ENST00000439406 DSG3P32926 999 aa11.14□□□□□ -0.63
HCG20-208ENST00000439406 DDRGK1Q96HY6 314 aa11.14□□□□□ -0.63
HCG20-208ENST00000439406 CLUAP1Q96AJ1 413 aa11.13□□□□□ -0.63
HCG20-208ENST00000439406 MAST1Q9Y2H9 1570 aa11.12□□□□□ -0.63
HCG20-208ENST00000439406 KDM5AP29375 1690 aaKnown RBP11.12□□□□□ -0.63
HCG20-208ENST00000439406 C19orf44Q9H6X5 657 aa11.12□□□□□ -0.63
HCG20-208ENST00000439406 SLC52A1Q9NWF4 448 aa11.12□□□□□ -0.63
HCG20-208ENST00000439406 PYGBP11216 843 aa11.11□□□□□ -0.63
HCG20-208ENST00000439406 EFCAB6Q5THR3 1501 aa11.1□□□□□ -0.63
HCG20-208ENST00000439406 DUOX2Q9NRD8 1548 aa11.1□□□□□ -0.63
HCG20-208ENST00000439406 MROH1Q8NDA8 1641 aa11.1□□□□□ -0.63
HCG20-208ENST00000439406 RBM25P49756 843 aaKnown RBP11.1□□□□□ -0.63
HCG20-208ENST00000439406 MFAP1P55081 439 aaKnown RBP11.1□□□□□ -0.63
HCG20-208ENST00000439406 RBM26Q5T8P6 1007 aaKnown RBP11.1□□□□□ -0.63
HCG20-208ENST00000439406 TBX22Q9Y458 520 aa11.1□□□□□ -0.63
HCG20-208ENST00000439406 KANK1Q14678 1352 aa11.1□□□□□ -0.63
HCG20-208ENST00000439406 ONECUT3O60422 494 aaPredicted RBP11.09□□□□□ -0.63
HCG20-208ENST00000439406 ATF3P18847 181 aa11.09□□□□□ -0.63
HCG20-208ENST00000439406 RBM6P78332 1123 aaKnown RBP11.09□□□□□ -0.63
HCG20-208ENST00000439406 CEP152O94986 1710 aa11.09□□□□□ -0.63
HCG20-208ENST00000439406 PIK3C2BO00750 1634 aa11.09□□□□□ -0.63
HCG20-208ENST00000439406 LRP6O75581 1613 aa11.09□□□□□ -0.63
HCG20-208ENST00000439406 COL16A1Q07092 1604 aaPredicted RBP11.09□□□□□ -0.63
HCG20-208ENST00000439406 NWD1Q149M9 1564 aa11.08□□□□□ -0.64
HCG20-208ENST00000439406 CCDC97Q96F63 343 aaPredicted RBP11.08□□□□□ -0.64
HCG20-208ENST00000439406 QTRT2Q9H974 415 aaKnown RBP11.08□□□□□ -0.64
HCG20-208ENST00000439406 SERPINA10Q9UK55 444 aa11.08□□□□□ -0.64
HCG20-208ENST00000439406 SRCAPQ6ZRS2 3230 aa11.08□□□□□ -0.64
HCG20-208ENST00000439406 PLEKHG3A1L390 1219 aa11.07□□□□□ -0.64
HCG20-208ENST00000439406 NGLY1Q96IV0 654 aa11.07□□□□□ -0.64
HCG20-208ENST00000439406 GZF1Q9H116 711 aaPredicted RBP11.07□□□□□ -0.64
HCG20-208ENST00000439406 ZRANB1Q9UGI0 708 aa11.07□□□□□ -0.64
HCG20-208ENST00000439406 ARIH1Q9Y4X5 557 aaPredicted RBP11.07□□□□□ -0.64
HCG20-208ENST00000439406 AFF2P51816 1311 aa11.07□□□□□ -0.64
HCG20-208ENST00000439406 NUTM2BA6NNL0 878 aaPredicted RBP11.06□□□□□ -0.64
HCG20-208ENST00000439406 NUTM2EB1AL46 878 aaPredicted RBP11.06□□□□□ -0.64
HCG20-208ENST00000439406 NUTM2AQ8IVF1 878 aaPredicted RBP11.06□□□□□ -0.64
HCG20-208ENST00000439406 LRRC59Q96AG4 307 aaKnown RBP11.06□□□□□ -0.64
HCG20-208ENST00000439406 RRP7BPQ9NSQ0 103 aa11.06□□□□□ -0.64
HCG20-208ENST00000439406 MYOM3Q5VTT5 1437 aa11.06□□□□□ -0.64
HCG20-208ENST00000439406 ERBINQ96RT1 1412 aa11.06□□□□□ -0.64
HCG20-208ENST00000439406 PLEKHG1Q9ULL1 1385 aa11.05□□□□□ -0.64
HCG20-208ENST00000439406 SHPRHQ149N8 1683 aa11.05□□□□□ -0.64
HCG20-208ENST00000439406 CHD2O14647 1828 aaKnown RBP11.05□□□□□ -0.64
HCG20-208ENST00000439406 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.05□□□□□ -0.64
HCG20-208ENST00000439406 MFRPQ9BY79 579 aa11.05□□□□□ -0.64
HCG20-208ENST00000439406 AHDC1Q5TGY3 1603 aaPredicted RBP11.05□□□□□ -0.64
HCG20-208ENST00000439406 KIF15Q9NS87 1388 aa11.04□□□□□ -0.64
HCG20-208ENST00000439406 PPP1R15AO75807 674 aaPredicted RBP11.04□□□□□ -0.64
HCG20-208ENST00000439406 NUTM2DQ5VT03 806 aaPredicted RBP11.04□□□□□ -0.64
HCG20-208ENST00000439406 FOXD4L5Q5VV16 416 aaPredicted RBP11.04□□□□□ -0.64
HCG20-208ENST00000439406 CCDC125Q86Z20 511 aa11.04□□□□□ -0.64
HCG20-208ENST00000439406 FOXD4L4Q8WXT5 416 aaPredicted RBP11.04□□□□□ -0.64
HCG20-208ENST00000439406 NOS1P29475 1434 aa11.03□□□□□ -0.64
HCG20-208ENST00000439406 HSP90B1P14625 803 aaKnown RBP11.03□□□□□ -0.64
HCG20-208ENST00000439406 CDK11BP21127 795 aaKnown RBP11.03□□□□□ -0.64
HCG20-208ENST00000439406 BRINP3Q76B58 766 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms