RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 NPHP3Q7Z494 1330 aa19.98■□□□□ 0.79
GARNL3-206ENST00000439286 LRPPRCP42704 1394 aaKnown RBP19.97■□□□□ 0.79
GARNL3-206ENST00000439286 ABCC11Q96J66 1382 aa19.95■□□□□ 0.79
GARNL3-206ENST00000439286 NUTM2FA1L443 756 aa19.95■□□□□ 0.78
GARNL3-206ENST00000439286 RBM6P78332 1123 aaKnown RBP19.95■□□□□ 0.78
GARNL3-206ENST00000439286 FOXO3O43524 673 aa19.94■□□□□ 0.78
GARNL3-206ENST00000439286 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
GARNL3-206ENST00000439286 C14orf93Q9H972 538 aaKnown RBP19.93■□□□□ 0.78
GARNL3-206ENST00000439286 NHSL1Q5SYE7 1610 aa19.93■□□□□ 0.78
GARNL3-206ENST00000439286 UPF1Q92900 1129 aaKnown RBP eCLIP19.92■□□□□ 0.78
GARNL3-206ENST00000439286 SIRT1Q96EB6 747 aa19.92■□□□□ 0.78
GARNL3-206ENST00000439286 DHX57Q6P158 1386 aaKnown RBP19.92■□□□□ 0.78
GARNL3-206ENST00000439286 USP21Q9UK80 565 aa19.91■□□□□ 0.78
GARNL3-206ENST00000439286 PIK3C2GO75747 1445 aa19.91■□□□□ 0.78
GARNL3-206ENST00000439286 PPLO60437 1756 aa19.9■□□□□ 0.78
GARNL3-206ENST00000439286 XPCQ01831 940 aaPredicted RBP19.9■□□□□ 0.78
GARNL3-206ENST00000439286 CFAP70Q5T0N1 1121 aa19.9■□□□□ 0.78
GARNL3-206ENST00000439286 TECPR2O15040 1411 aa19.9■□□□□ 0.78
GARNL3-206ENST00000439286 RAB3GAP2Q9H2M9 1393 aa19.89■□□□□ 0.77
GARNL3-206ENST00000439286 YTHDC2Q9H6S0 1430 aaKnown RBP19.89■□□□□ 0.77
GARNL3-206ENST00000439286 CDK12Q9NYV4 1490 aaPredicted RBP19.89■□□□□ 0.77
GARNL3-206ENST00000439286 TRPC5Q9UL62 973 aaPredicted RBP19.89■□□□□ 0.77
GARNL3-206ENST00000439286 POGKQ9P215 609 aa19.88■□□□□ 0.77
GARNL3-206ENST00000439286 SETD1AO15047 1707 aaKnown RBP19.88■□□□□ 0.77
GARNL3-206ENST00000439286 PLEKHH1Q9ULM0 1364 aa19.87■□□□□ 0.77
GARNL3-206ENST00000439286 FNBP4Q8N3X1 1017 aaPredicted RBP19.86■□□□□ 0.77
GARNL3-206ENST00000439286 CDC42BPGQ6DT37 1551 aa19.86■□□□□ 0.77
GARNL3-206ENST00000439286 PSME1Q06323 249 aa19.85■□□□□ 0.77
GARNL3-206ENST00000439286 SAFB2Q14151 953 aaKnown RBP eCLIP19.85■□□□□ 0.77
GARNL3-206ENST00000439286 KRT28Q7Z3Y7 464 aa19.84■□□□□ 0.77
GARNL3-206ENST00000439286 PRAM1Q96QH2 718 aa19.84■□□□□ 0.77
GARNL3-206ENST00000439286 HAP1P54257 671 aaPredicted RBP19.83■□□□□ 0.77
GARNL3-206ENST00000439286 KDM2AQ9Y2K7 1162 aa19.83■□□□□ 0.77
GARNL3-206ENST00000439286 PHF8Q9UPP1 1060 aa19.82■□□□□ 0.76
GARNL3-206ENST00000439286 LAMC1P11047 1609 aa19.81■□□□□ 0.76
GARNL3-206ENST00000439286 HRCP23327 699 aa19.81■□□□□ 0.76
GARNL3-206ENST00000439286 DCAF11Q8TEB1 546 aa19.81■□□□□ 0.76
GARNL3-206ENST00000439286 STAC3Q96MF2 364 aa19.81■□□□□ 0.76
GARNL3-206ENST00000439286 MYOM2P54296 1465 aa19.8■□□□□ 0.76
GARNL3-206ENST00000439286 SPATA31A3Q5VYP0 1347 aa19.79■□□□□ 0.76
GARNL3-206ENST00000439286 RGS12O14924 1447 aa19.79■□□□□ 0.76
GARNL3-206ENST00000439286 PXDNQ92626 1479 aa19.79■□□□□ 0.76
GARNL3-206ENST00000439286 LMOD2Q6P5Q4 547 aa19.78■□□□□ 0.76
GARNL3-206ENST00000439286 TRAK1Q9UPV9 953 aa19.78■□□□□ 0.76
GARNL3-206ENST00000439286 NRXN1Q9ULB1 1477 aa19.78■□□□□ 0.76
GARNL3-206ENST00000439286 ATAD2Q6PL18 1390 aa19.75■□□□□ 0.75
GARNL3-206ENST00000439286 PLEKHG5O94827 1062 aa19.75■□□□□ 0.75
GARNL3-206ENST00000439286 UNC5CLQ8IV45 518 aa19.74■□□□□ 0.75
GARNL3-206ENST00000439286 PMFBP1Q8TBY8 1022 aa19.74■□□□□ 0.75
GARNL3-206ENST00000439286 GJD4Q96KN9 370 aaPredicted RBP19.74■□□□□ 0.75
GARNL3-206ENST00000439286 ATRNO75882 1429 aa19.74■□□□□ 0.75
GARNL3-206ENST00000439286 IFT172Q9UG01 1749 aa19.73■□□□□ 0.75
GARNL3-206ENST00000439286 KNDC1Q76NI1 1749 aa19.72■□□□□ 0.75
GARNL3-206ENST00000439286 HIRIP3Q9BW71 556 aaPredicted RBP19.72■□□□□ 0.75
GARNL3-206ENST00000439286 COL22A1Q8NFW1 1626 aaPredicted RBP19.72■□□□□ 0.75
GARNL3-206ENST00000439286 EIF3AQ14152 1382 aaKnown RBP19.71■□□□□ 0.75
GARNL3-206ENST00000439286 MINK1Q8N4C8 1332 aaPredicted RBP19.71■□□□□ 0.75
GARNL3-206ENST00000439286 SBNO1A3KN83 1393 aa19.7■□□□□ 0.74
GARNL3-206ENST00000439286 BCL9LQ86UU0 1499 aa19.7■□□□□ 0.74
GARNL3-206ENST00000439286 ARHGEF10O15013 1369 aa19.7■□□□□ 0.74
GARNL3-206ENST00000439286 GPRASP1Q5JY77 1395 aa19.7■□□□□ 0.74
GARNL3-206ENST00000439286 TNS3Q68CZ2 1445 aa19.69■□□□□ 0.74
GARNL3-206ENST00000439286 ANKARQ7Z5J8 1434 aa19.69■□□□□ 0.74
GARNL3-206ENST00000439286 CABLES1Q8TDN4 633 aa19.69■□□□□ 0.74
GARNL3-206ENST00000439286 DLC1Q96QB1 1528 aa19.69■□□□□ 0.74
GARNL3-206ENST00000439286 WASLO00401 505 aaPredicted RBP19.68■□□□□ 0.74
GARNL3-206ENST00000439286 CCDC9Q9Y3X0 531 aaKnown RBP19.68■□□□□ 0.74
GARNL3-206ENST00000439286 CCDC125Q86Z20 511 aa19.67■□□□□ 0.74
GARNL3-206ENST00000439286 NGDNQ8NEJ9 315 aaKnown RBP19.67■□□□□ 0.74
GARNL3-206ENST00000439286 KIF1AQ12756 1690 aa19.67■□□□□ 0.74
GARNL3-206ENST00000439286 FMN2Q9NZ56 1722 aa19.66■□□□□ 0.74
GARNL3-206ENST00000439286 PAK3O75914 559 aaPredicted RBP19.63■□□□□ 0.73
GARNL3-206ENST00000439286 VPS72Q15906 364 aa19.63■□□□□ 0.73
GARNL3-206ENST00000439286 ADGRB1O14514 1584 aa19.62■□□□□ 0.73
GARNL3-206ENST00000439286 SLIT2O94813 1529 aa19.62■□□□□ 0.73
GARNL3-206ENST00000439286 FAM83GA6ND36 823 aa19.6■□□□□ 0.73
GARNL3-206ENST00000439286 ZRANB1Q9UGI0 708 aa19.6■□□□□ 0.73
GARNL3-206ENST00000439286 RALGAPBQ86X10 1494 aa19.6■□□□□ 0.73
GARNL3-206ENST00000439286 PRR36Q9H6K5 1346 aa19.59■□□□□ 0.73
GARNL3-206ENST00000439286 A0A0G2JS52 829 aa19.59■□□□□ 0.73
GARNL3-206ENST00000439286 MYT1Q01538 1121 aa19.59■□□□□ 0.73
GARNL3-206ENST00000439286 SF3B2Q13435 895 aaKnown RBP19.59■□□□□ 0.73
GARNL3-206ENST00000439286 SEPT12Q8IYM1 358 aa19.59■□□□□ 0.73
GARNL3-206ENST00000439286 NUDT16Q96DE0 195 aaKnown RBP19.59■□□□□ 0.73
GARNL3-206ENST00000439286 CDK19Q9BWU1 502 aa19.57■□□□□ 0.72
GARNL3-206ENST00000439286 BTG4Q9NY30 223 aa19.56■□□□□ 0.72
GARNL3-206ENST00000439286 ADGRB2O60241 1585 aa19.56■□□□□ 0.72
GARNL3-206ENST00000439286 TULP4Q9NRJ4 1543 aa19.56■□□□□ 0.72
GARNL3-206ENST00000439286 USP32Q8NFA0 1604 aa19.55■□□□□ 0.72
GARNL3-206ENST00000439286 ONECUT3O60422 494 aaPredicted RBP19.53■□□□□ 0.72
GARNL3-206ENST00000439286 KRT27Q7Z3Y8 459 aa19.53■□□□□ 0.72
GARNL3-206ENST00000439286 PRDM11Q9NQV5 511 aa19.53■□□□□ 0.72
GARNL3-206ENST00000439286 CCDC61Q9Y6R9 512 aa19.53■□□□□ 0.72
GARNL3-206ENST00000439286 SRPK2P78362 688 aaKnown RBP19.5■□□□□ 0.71
GARNL3-206ENST00000439286 FAM98CQ17RN3 349 aaKnown RBP19.5■□□□□ 0.71
GARNL3-206ENST00000439286 NBPF1Q3BBV0 1214 aa19.5■□□□□ 0.71
GARNL3-206ENST00000439286 BLMP54132 1417 aaPredicted RBP19.5■□□□□ 0.71
GARNL3-206ENST00000439286 MARF1Q9Y4F3 1742 aaKnown RBP19.49■□□□□ 0.71
GARNL3-206ENST00000439286 NBPF8Q3BBV2 869 aa19.49■□□□□ 0.71
GARNL3-206ENST00000439286 ACEP12821 1306 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms